Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 9.3e-52 206.5 95 100.0
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 8.5e-37 156.8 86 86.0
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 4.4e-33 144.4 90 78.9
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 4.4e-33 144.4 90 78.9
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 4.7e-27 124.4 89 62.9
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 2.6e-25 118.6 86 65.1
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 3.5e-22 108.2 86 62.8
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 2.5e-20 102.1 87 59.8
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 1.4e-18 96.3 87 56.3
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 2.3e-18 95.5 89 52.8
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 1.2e-17 93.2 84 53.6
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 1.3e-16 89.7 84 52.4
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 1.7e-16 89.4 82 56.1
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 2.8e-16 88.6 83 53.0
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 3.7e-16 88.2 64 59.4
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 6.3e-16 87.4 89 53.9
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 1.1e-15 86.7 82 50.0
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 1.4e-15 86.3 83 56.6
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 1.4e-15 86.3 84 50.0
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 3.1e-15 85.1 86 46.5
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 4.1e-15 84.7 91 53.8
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 9.1e-15 83.6 70 60.0
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.6e-14 82.8 84 48.8
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 1.6e-14 82.8 82 43.9
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 3.5e-14 81.6 84 48.8
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 4.5e-14 81.3 84 47.6
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 4.5e-14 81.3 85 44.7
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 1.0e-13 80.1 86 44.2
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.0e-13 80.1 84 47.6
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 1.3e-13 79.7 79 50.6
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 2.3e-13 79.0 95 49.5
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 2.9e-13 78.6 92 45.7
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.0e-13 77.8 81 45.7
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 6.5e-13 77.4 66 51.5
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 8.6e-13 77.0 83 41.0
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 1.5e-12 76.3 83 41.0
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 2.5e-12 75.5 91 44.0
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 2.5e-12 75.5 89 46.1
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 3.2e-12 75.1 87 44.8
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 4.2e-12 74.7 91 42.9
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 5.5e-12 74.3 90 45.6
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 5.5e-12 74.3 92 40.2
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 5.5e-12 74.3 91 42.9
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 7.2e-12 73.9 91 42.9
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 7.2e-12 73.9 90 43.3
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 9.5e-12 73.6 93 46.2
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 1.6e-11 72.8 90 44.4
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 2.8e-11 72.0 75 44.0
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 3.6e-11 71.6 92 40.2
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 3.6e-11 71.6 92 40.2
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 3.6e-11 71.6 83 48.2
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 3.6e-11 71.6 90 43.3
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 4.7e-11 71.2 95 40.0
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 4.7e-11 71.2 82 47.6
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 6.1e-11 70.9 82 47.6
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 1.0e-10 70.1 90 42.2
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 5.2e-10 67.8 85 43.5
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 5.2e-10 67.8 86 36.0
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 8.8e-10 67.0 88 42.0
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 1.1e-07 60.1 88 38.6
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 7.0e-07 57.4 86 31.4
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 3.5e-06 55.1 51 45.1
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 4.5e-06 54.7 73 39.7


User provided reference genes

Program Settings