Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004880g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-50 199.9 92 100.0
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 9.4e-25 116.7 102 64.7
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-23 112.1 96 60.4
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-23 110.2 96 58.3
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-22 106.7 89 59.6
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-21 105.5 96 54.2
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-21 104.0 96 54.2
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-20 103.2 102 52.0
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-20 103.2 96 54.2
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-20 101.3 96 52.1
Nitab4.5_0003436g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-20 100.9 80 61.2
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-19 98.6 96 53.1
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-19 98.2 96 50.0
Nitab4.5_0002487g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-19 98.2 92 54.3
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-18 96.3 96 50.0
Nitab4.5_0000527g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-17 93.2 85 54.1
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-17 91.3 103 44.7
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-17 90.9 96 51.0
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-17 90.9 95 49.5
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-17 90.1 96 51.0
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 9.5e-17 90.1 96 49.0
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-16 87.8 85 54.1
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-15 85.5 101 47.5
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-15 85.5 100 45.0
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-15 84.7 83 48.2
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-15 84.7 95 45.3
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-15 84.3 96 47.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-15 84.3 92 47.8
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-15 84.0 93 45.2
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 82.8 96 46.9
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 82.8 82 53.7
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 82.8 92 51.1
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 82.8 85 51.8
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-14 82.4 96 46.9
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-14 82.0 89 53.9
Nitab4.5_0000541g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-14 81.3 95 44.2
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-14 81.3 95 43.2
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-14 80.1 93 47.3
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-13 79.0 96 45.8
Nitab4.5_0009728g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-13 78.2 65 58.5
Nitab4.5_0000096g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-13 77.4 74 48.6
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-13 77.0 95 46.3
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-12 76.6 105 41.9
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-12 76.6 94 43.6
Nitab4.5_0005560g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-12 76.3 80 53.8
Nitab4.5_0000175g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-12 75.9 89 43.8
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 75.5 96 43.8
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 75.5 79 51.9
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-12 75.1 89 48.3
Nitab4.5_0002586g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 74.7 84 47.6
Nitab4.5_0003071g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 74.7 43 79.1
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 74.7 96 42.7
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-12 74.3 87 42.5
Nitab4.5_0005284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-12 74.3 85 45.9
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-12 74.3 83 45.8
Nitab4.5_0002117g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-12 73.6 83 44.6
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-12 73.6 95 44.2
Nitab4.5_0006194g0020 Nicotiana tabacum HOM05D012219 ORTHO05D000007 9.2e-12 73.6 96 43.8
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.2 90 43.3
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-11 72.4 85 49.4
Nitab4.5_0001580g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-11 72.0 83 45.8
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-11 70.9 95 41.1
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-10 70.1 82 47.6
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-10 70.1 92 44.6
Nitab4.5_0006719g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-10 70.1 78 48.7
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-10 70.1 96 39.6
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-10 69.7 82 47.6
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.3 93 38.7
Nitab4.5_0001423g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-10 68.6 82 46.3
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-10 68.2 83 48.2
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 3.8e-10 68.2 83 41.0
Nitab4.5_0003601g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-10 67.8 82 45.1
Nitab4.5_0009832g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-10 67.0 44 79.5
Nitab4.5_0006711g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 66.6 95 38.9
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-09 65.9 96 42.7
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-09 65.9 69 52.2
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 3.3e-09 65.1 69 47.8
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-09 65.1 95 36.8
Nitab4.5_0002438g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 64.7 80 42.5
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-09 64.3 87 42.5
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 63.5 96 41.7
Nitab4.5_0000023g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.2 44 68.2
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.2 83 42.2
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.2 96 38.5
Nitab4.5_0000638g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 62.8 82 42.7
Nitab4.5_0002977g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-08 61.6 79 44.3
Nitab4.5_0000640g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-08 61.2 82 47.6
Nitab4.5_0003260g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-08 61.2 87 37.9
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-08 61.2 95 38.9
Nitab4.5_0000257g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-08 60.8 76 46.1
Nitab4.5_0000177g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-08 60.5 79 39.2
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-08 60.5 87 40.2
Nitab4.5_0000242g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.1 96 36.5
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.1 50 58.0
Nitab4.5_0000639g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 58.9 66 47.0
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 58.9 47 61.7
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-07 58.5 82 39.0
Nitab4.5_0001287g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-07 58.5 37 75.7
Nitab4.5_0001980g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-07 58.2 81 42.0
Nitab4.5_0000429g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-07 57.8 45 60.0
Nitab4.5_0000659g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-07 57.8 73 41.1
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-07 57.8 82 39.0
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-07 57.8 79 40.5
Nitab4.5_0006080g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-07 57.4 80 38.8
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 6.8e-07 57.4 97 34.0
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-07 57.0 32 81.2
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-06 56.6 89 37.1
Nitab4.5_0002045g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-06 56.6 75 42.7
Nitab4.5_0000033g0390 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 56.2 85 36.5
Nitab4.5_0025326g0010 Nicotiana tabacum HOM05D012219 ORTHO05D000007 1.5e-06 56.2 82 41.5
Nitab4.5_0000329g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 55.8 65 46.2
Nitab4.5_0008753g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 55.8 73 43.8
Nitab4.5_0009093g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 55.8 93 35.5
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.0e-06 55.8 88 37.5
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-06 55.1 94 34.0
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-06 54.7 73 41.1
Nitab4.5_0003940g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-06 54.7 79 39.2
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.4e-06 54.7 93 33.3
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 5.7e-06 54.3 97 32.0
Nitab4.5_0003188g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-06 53.9 94 35.1
SHI34716 Sapria himalayana HOM05D000024 ORTHO05D000007 7.5e-06 53.9 95 30.5


User provided reference genes

Program Settings