Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 3.9e-212 741.1 351 100.0
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 6.7e-188 660.6 343 93.3
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 4.7e-165 584.7 347 82.7
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 4.4e-163 578.2 348 82.2
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.6e-155 552.4 287 88.5
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 9.1e-153 543.9 286 88.8
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 3.3e-142 508.8 342 70.8
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.2e-141 506.9 348 69.0
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.6e-141 506.5 336 71.1
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.6e-141 505.4 344 70.9
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 8.0e-141 504.2 344 68.6
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.8e-140 503.1 306 75.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 5.2e-140 501.5 305 74.4
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 8.9e-140 500.7 336 70.5
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.5e-139 500.0 285 81.1
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 2.0e-139 499.6 337 70.0
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 5.7e-139 498.0 299 76.9
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 7.5e-139 497.7 322 72.4
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 9.8e-139 497.3 342 69.3
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.3e-138 496.9 335 70.1
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.3e-138 496.9 287 76.0
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 8.3e-138 494.2 292 76.0
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.1e-137 493.8 322 71.7
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 9.2e-137 490.7 296 75.7
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 9.2e-137 490.7 316 70.9
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.0e-136 489.6 322 71.4
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 3.5e-136 488.8 253 90.1
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.0e-135 487.3 308 73.1
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.3e-135 486.9 291 76.3
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.7e-135 486.5 291 76.3
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.7e-135 486.5 289 77.2
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 2.3e-135 486.1 349 66.5
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 2.3e-135 486.1 306 74.5
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.9e-135 485.7 340 66.8
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.9e-135 485.3 291 75.9
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 5.0e-135 485.0 287 75.3
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.1e-134 483.8 301 72.1
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.1e-134 483.8 338 68.0
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 1.9e-134 483.0 296 74.3
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 2.5e-134 482.6 285 76.5
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.3e-134 482.3 291 75.9
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 3.3e-134 482.3 288 75.0
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 7.3e-134 481.1 304 70.4
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.2e-133 480.3 281 79.0
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.6e-133 479.9 288 75.7
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 4.7e-133 478.4 284 74.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 2.3e-132 476.1 288 76.7
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 4.0e-132 475.3 313 70.3
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 4.0e-132 475.3 288 75.3
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 5.2e-132 474.9 346 65.0
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 6.8e-132 474.6 288 76.0
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.0e-131 473.0 284 77.1
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 4.4e-131 471.9 280 78.2
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 5.8e-131 471.5 287 72.5
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.7e-130 469.9 290 73.1
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 2.9e-130 469.2 297 72.7
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 2.9e-130 469.2 297 72.7
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.4e-129 466.8 307 71.0
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.9e-129 466.5 332 65.1
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 3.2e-129 465.7 295 71.2
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 7.0e-129 464.5 314 68.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 1.2e-128 463.8 310 69.7
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.0e-128 463.0 303 71.9
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.7e-128 462.6 312 68.3
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 6.0e-128 461.5 333 65.2
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 7.8e-128 461.1 287 72.5
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.0e-127 460.7 304 68.8
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 1.0e-127 460.7 333 64.6
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.3e-127 460.3 333 64.6
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 2.3e-127 459.5 332 64.5
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 3.9e-127 458.8 287 71.8
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 5.0e-127 458.4 337 62.6
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 5.0e-127 458.4 302 69.5
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 6.6e-127 458.0 333 64.6
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.1e-126 457.2 311 67.8
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.6e-125 453.4 301 70.1
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.8e-124 449.9 270 74.8
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 2.3e-124 449.5 288 70.1
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 5.2e-124 448.4 284 71.1
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 2.0e-123 446.4 286 68.2
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.9e-121 439.9 366 60.7
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 2.7e-120 436.0 287 71.1
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 5.6e-118 428.3 287 67.6
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 2.8e-117 426.0 343 61.2
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 3.2e-113 412.5 250 75.2
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 1.6e-112 410.2 286 67.5
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.1e-112 409.8 247 74.5
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 3.9e-111 405.6 245 75.9
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.9e-110 403.3 244 75.0
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.8e-109 399.4 304 58.6
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.7e-104 382.9 287 59.2
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 3.5e-104 382.5 287 59.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 3.3e-102 375.9 306 58.8
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 4.0e-100 369.0 310 55.8
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.2e-96 357.5 286 57.0
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 2.3e-95 353.2 254 68.9
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.8e-84 317.0 195 72.8
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 4.5e-75 285.8 294 48.3
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 4.3e-70 269.2 143 82.5
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 2.0e-54 217.2 143 68.5
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.1e-52 211.5 114 79.8
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.5e-50 202.2 109 78.0
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.1e-46 191.4 119 72.3
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.7e-45 186.4 105 80.0
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.0e-42 178.3 283 36.7
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.8e-37 160.2 114 63.2
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 5.2e-31 139.4 155 49.7
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 5.7e-30 136.0 155 46.5
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 2.4e-28 130.6 91 64.8
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 1.6e-27 127.9 104 66.3
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 8.3e-21 105.5 126 44.4
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 5.2e-15 86.3 55 69.1
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.5e-11 73.6 52 59.6
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 4.3e-09 66.6 40 70.0
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 7.3e-09 65.9 42 69.0


User provided reference genes

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