Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.4e-251 871.7 438 100.0
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 6.1e-231 803.9 438 93.2
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 8.9e-206 720.3 459 79.7
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 5.6e-192 674.5 472 70.6
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 6.8e-190 667.5 476 69.3
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 2.0e-189 666.0 476 68.3
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 4.4e-189 664.8 467 69.2
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 8.3e-188 660.6 464 70.5
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.9e-187 659.4 470 68.9
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.9e-187 659.4 464 70.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 3.5e-186 655.2 484 66.9
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 3.5e-186 655.2 463 70.0
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 4.6e-186 654.8 468 67.5
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 7.8e-186 654.1 468 67.7
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 1.3e-185 653.3 466 68.5
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.0e-185 652.1 461 69.6
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 3.9e-185 651.7 471 68.4
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 3.9e-185 651.7 466 69.5
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 5.1e-185 651.4 465 69.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 6.6e-185 651.0 464 68.8
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 8.6e-185 650.6 506 64.4
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.5e-184 649.0 472 67.4
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 3.3e-184 648.7 476 67.4
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 2.8e-183 645.6 466 68.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.4e-182 642.5 499 64.3
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.1e-182 642.1 496 64.5
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.2e-181 640.2 472 65.5
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 4.4e-181 638.3 464 66.6
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.9e-180 635.6 475 66.5
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 3.8e-180 635.2 466 66.7
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 3.8e-180 635.2 474 65.2
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.4e-180 634.0 466 66.1
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.9e-179 632.9 469 65.9
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 3.2e-179 632.1 465 67.3
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 3.2e-179 632.1 478 65.5
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 4.2e-179 631.7 472 65.5
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 7.1e-179 630.9 465 67.5
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.2e-178 630.2 505 62.8
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.2e-178 630.2 464 66.4
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.1e-178 629.4 471 65.2
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 3.5e-178 628.6 463 66.1
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.0e-177 627.1 462 66.0
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 8.7e-177 624.0 465 64.9
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 8.7e-177 624.0 469 65.0
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 4.3e-176 621.7 460 66.1
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 6.2e-175 617.8 488 63.7
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 8.1e-175 617.5 332 90.4
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.8e-174 616.3 469 63.3
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 6.9e-174 614.4 462 65.2
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 9.0e-174 614.0 550 58.2
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.2e-173 613.6 545 58.9
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.9e-172 609.0 467 64.0
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 6.4e-172 607.8 499 61.9
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.2e-170 603.6 465 62.8
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.2e-170 603.6 502 60.6
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 6.0e-170 601.3 501 62.1
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.5e-168 596.7 460 64.1
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.6e-165 585.9 469 61.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 7.1e-163 577.8 409 69.7
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.3e-159 567.0 462 60.0
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.6e-159 566.6 439 64.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.4e-158 563.5 335 80.9
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 7.6e-157 557.8 469 58.2
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 4.9e-156 555.1 401 67.3
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.2e-155 552.4 468 61.5
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 7.1e-155 551.2 476 59.9
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 9.3e-155 550.8 435 63.4
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.6e-154 550.1 392 68.9
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.5e-152 543.5 460 58.3
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 5.6e-152 541.6 468 58.1
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.6e-152 541.6 359 74.1
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.3e-148 530.4 410 62.7
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.3e-148 530.4 410 62.7
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 8.7e-145 517.7 422 61.1
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.1e-144 517.3 384 66.4
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 2.0e-141 506.5 543 51.4
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 5.5e-139 498.4 472 56.1
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.4e-137 493.8 280 87.1
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.4e-137 493.8 386 63.2
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.0e-129 467.6 350 67.4
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 4.2e-123 445.7 332 67.8
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.6e-66 256.5 235 57.0
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.4e-62 244.6 156 75.6
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.5e-56 224.6 236 54.7
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 6.0e-53 212.6 159 67.3
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.3e-51 206.8 431 28.8
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 4.5e-40 169.9 171 52.6
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.6e-29 134.8 88 70.5
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.9e-23 114.0 77 68.8
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.4e-22 111.7 460 25.7
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.0e-16 91.3 57 77.2
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.9e-15 87.4 393 24.7
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.1e-11 75.5 350 23.7
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 8.2e-10 69.3 365 24.4
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 9.1e-09 65.9 414 22.5
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 2.5e-06 57.8 59 44.1
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 5.5e-06 56.6 36 75.0


User provided reference genes

Program Settings