Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004872g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.1e-81 304.3 146 100.0
Nitab4.5_0002792g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.6e-63 245.0 157 76.4
Nitab4.5_0001334g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 6.4e-52 207.6 158 69.0
Nitab4.5_0006479g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 7.6e-45 184.1 162 61.1
Nitab4.5_0002837g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.5e-40 169.9 140 64.3
Nitab4.5_0000045g0210 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.3e-39 166.8 116 71.6
Nitab4.5_0000855g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 8.2e-39 164.1 123 69.1
Nitab4.5_0002516g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.1e-30 135.6 116 62.9
Nitab4.5_0000559g0270 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.2e-29 133.7 112 67.0
Nitab4.5_0000376g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.1e-22 109.0 64 71.9
Nitab4.5_0000072g0380 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.9e-20 102.4 64 70.3
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 1.9e-19 99.8 93 52.7
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 9.4e-19 97.4 93 50.5
Solyc11g150102.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 3.6e-18 95.5 93 50.5
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 8.0e-18 94.4 93 48.4
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 8.0e-18 94.4 93 48.4
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 8.0e-18 94.4 93 48.4
Peaxi162Scf00334g00126 Petunia axillaris HOM05D009060 ORTHO05D011398 2.6e-16 89.4 148 35.1
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 3.7e-15 85.5 81 51.9
Nitab4.5_0006088g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 9.1e-14 80.9 53 62.3
PGSC0003DMG400042476 Solanum tuberosum HOM05D009060 ORTHO05D011398 2.0e-13 79.7 100 45.0
Sopen10g022460 Solanum pennellii HOM05D000030 ORTHO05D000009 1.9e-11 73.2 101 40.6
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 4.2e-11 72.0 101 40.6
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 4.2e-11 72.0 50 56.0
Solyc07g049405.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.6e-10 70.1 50 54.0
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 1.6e-10 70.1 96 41.7
Solyc11g150144.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 1.2e-08 63.9 68 39.7
Sopen03g009880 Solanum pennellii HOM05D009060 ORTHO05D011398 1.5e-08 63.5 81 38.3
Nitab4.5_0008198g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 7.5e-08 61.2 81 46.9
Nitab4.5_0000133g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.3e-07 60.5 87 41.4
Solyc12g021265.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 3.7e-07 58.9 54 40.7
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 3.7e-07 58.9 54 40.7
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 6.3e-07 58.2 47 44.7
Nitab4.5_0003152g0080 Nicotiana tabacum HOM05D014912 ORTHO05D011398 6.3e-07 58.2 89 38.2
Duzib128G1005 Durio zibethinus HOM05D000030 ORTHO05D000009 1.1e-06 57.4 70 37.1
CSS0039703 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-06 57.0 88 31.8
Solyc05g045957.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 1.4e-06 57.0 54 40.7
Solyc11g150101.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 1.4e-06 57.0 60 36.7
CSS0038209 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.8e-06 56.6 63 39.7
CSS0048206 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.8e-06 56.6 47 44.7
Hma1.2p1_1137F.1_g260640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.4e-06 56.2 52 44.2
Nitab4.5_0004648g0020 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.4e-06 56.2 39 66.7
Nitab4.5_0005833g0010 Nicotiana tabacum HOM05D003038 ORTHO05D003514 2.4e-06 56.2 22 100.0
CSS0008746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.1e-06 55.8 88 31.8
CSS0048534 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 3.1e-06 55.8 47 46.8
Hma1.2p1_0284F.1_g113810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.1e-06 55.5 85 36.5
CSS0004161 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.3e-06 55.1 88 30.7
Nitab4.5_0004648g0030 Nicotiana tabacum HOM05D009060 ORTHO05D285201 5.3e-06 55.1 92 43.5
ECA234G3092 Erigeron canadensis HOM05D000030 ORTHO05D000009 7.0e-06 54.7 47 38.3
Nitab4.5_0001298g0080 Nicotiana tabacum HOM05D009060 ORTHO05D011398 7.0e-06 54.7 46 58.7


User provided reference genes

Program Settings