Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004867g0020 Nicotiana tabacum HOM05D003214 ORTHO05D004330 3.9e-47 191.0 92 100.0
Solyc01g111780.4 Solanum lycopersicum HOM05D003214 ORTHO05D004330 8.0e-16 87.0 69 66.7
Sopen01g053820 Solanum pennellii HOM05D003214 ORTHO05D004330 8.0e-16 87.0 69 66.7
CAN.G588.99 Capsicum annuum HOM05D003214 ORTHO05D004330 3.0e-15 85.1 69 63.8
Nitab4.5_0000079g0220 Nicotiana tabacum HOM05D003214 ORTHO05D004330 6.8e-15 84.0 69 65.2
Peaxi162Scf00078g01329 Petunia axillaris HOM05D003214 ORTHO05D004330 8.8e-15 83.6 69 65.2
MSTRG.13818 Avicennia marina HOM05D003214 ORTHO05D004330 9.8e-14 80.1 69 60.9
Migut.E01296 Erythranthe guttata HOM05D003214 ORTHO05D004330 1.3e-13 79.7 69 59.4
SGA_v2.0_scaffold196G40882 Striga asiatica HOM05D003214 ORTHO05D004330 1.7e-13 79.3 69 59.4
vmacro02292 Vaccinium macrocarpon HOM05D003214 ORTHO05D004330 2.8e-13 78.6 69 59.4
Manes.11G097900 Manihot esculenta HOM05D003214 ORTHO05D004330 3.7e-13 78.2 69 56.5
Potri.004G177700 Populus trichocarpa HOM05D003214 ORTHO05D004330 3.7e-13 78.2 69 56.5
QL01p046809 Quercus lobata HOM05D003214 ORTHO05D004330 3.7e-13 78.2 69 59.4
Oeu031591.4 Olea europaea HOM05D003214 ORTHO05D004330 4.9e-13 77.8 69 59.4
Potri.009G138200 Populus trichocarpa HOM05D003214 ORTHO05D004330 4.9e-13 77.8 69 56.5
Sabra09G0107100 Salix brachista HOM05D003214 ORTHO05D004330 4.9e-13 77.8 69 56.5
TPR.G2434 Trifolium pratense HOM05D003214 ORTHO05D004330 6.3e-13 77.4 92 45.7
Ciclev10027778m.g Citrus clementina HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
COL.COLO4_17378 Corchorus olitorius HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
Gohir.A01G170600 Gossypium hirsutum HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
Gohir.D01G161600 Gossypium hirsutum HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
Gorai.002G200500 Gossypium raimondii HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
Thecc.02G055400 Theobroma cacao HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
GSVIVG01023974001 Vitis vinifera HOM05D003214 ORTHO05D004330 8.3e-13 77.0 69 58.0
Cfa005285 Carpinus fangiana HOM05D003214 ORTHO05D004330 1.4e-12 76.3 69 58.0
Haze_02105 Corylus avellana HOM05D003214 ORTHO05D004330 1.4e-12 76.3 69 58.0
Aqoxy5G01104 Aquilegia oxysepala HOM05D003214 ORTHO05D004330 1.8e-12 75.9 69 56.5
CSS0041068 Camellia sinensis var. sinensis HOM05D003214 ORTHO05D004330 1.8e-12 75.9 69 58.0
Hma1.2p1_0144F.1_g064770 Hydrangea macrophylla HOM05D003214 ORTHO05D004330 1.8e-12 75.9 69 58.0
Sabra04G0119600 Salix brachista HOM05D003214 ORTHO05D004330 1.8e-12 75.9 69 56.5
Glyma.20G106300 Glycine max HOM05D003214 ORTHO05D004330 2.4e-12 75.5 69 56.5
Phvul.007G017800 Phaseolus vulgaris HOM05D003214 ORTHO05D004330 2.4e-12 75.5 69 56.5
VMungo0720G0502 Vigna mungo HOM05D003214 ORTHO05D004330 2.4e-12 75.5 69 56.5
CiPaw.05G085300 Carya illinoinensis HOM05D003214 ORTHO05D004330 3.1e-12 75.1 69 56.5
Ca_03296_v3 Cicer arietinum L. HOM05D003214 ORTHO05D004330 3.1e-12 75.1 69 55.1
Medtr1g112920 Medicago truncatula HOM05D003214 ORTHO05D004330 3.1e-12 75.1 69 55.1
Duzib052G0573 Durio zibethinus HOM05D003214 ORTHO05D004330 5.4e-12 74.3 69 56.5
Rhsim11G0193600 Rhododendron simsii HOM05D003214 ORTHO05D004330 5.4e-12 74.3 69 55.1
TWI75G1738 Tripterygium wilfordii HOM05D003214 ORTHO05D004330 5.4e-12 74.3 69 55.1
Lj5g0003348 Lotus japonicus HOM05D003214 ORTHO05D004330 7.0e-12 73.9 69 55.1
PSO210G6165 Papaver somniferum HOM05D003214 ORTHO05D004330 7.0e-12 73.9 69 55.1
DCAR_022960 Daucus carota HOM05D003214 ORTHO05D004330 9.2e-12 73.6 69 55.1
Glyma.10G283400 Glycine max HOM05D003214 ORTHO05D004330 9.2e-12 73.6 69 56.5
HanXRQChr04g0110121 Helianthus annuus HOM05D003214 ORTHO05D004330 9.2e-12 73.6 68 55.9
Psat6g232040 Pisum sativum HOM05D003214 ORTHO05D004330 9.2e-12 73.6 69 53.6
Nn1g08447 Nelumbo nucifera HOM05D003214 ORTHO05D004330 1.2e-11 73.2 69 53.6
Atru.chr5.3440 Acer truncatum HOM05D003214 ORTHO05D004330 1.6e-11 72.8 69 53.6
arahy.Tifrunner.gnm1.ann1.47PMEA Arachis hypogaea HOM05D003214 ORTHO05D004330 1.6e-11 72.8 69 53.6
FAN24G0254 Fragaria x ananassa HOM05D003214 ORTHO05D004330 2.0e-11 72.4 69 55.1
Nn5g27766 Nelumbo nucifera HOM05D003214 ORTHO05D004330 2.7e-11 72.0 69 53.6
PSO170G1418 Papaver somniferum HOM05D003214 ORTHO05D004330 2.7e-11 72.0 68 54.4
PGR142G0610 Punica granatum HOM05D003214 ORTHO05D004330 2.7e-11 72.0 69 55.1
MSTRG.12021 Avicennia marina HOM05D003214 ORTHO05D004330 3.5e-11 71.6 69 53.6
CSS0005434 Camellia sinensis var. sinensis HOM05D003214 ORTHO05D004330 3.5e-11 71.6 69 53.6
CiPaw.06G120100 Carya illinoinensis HOM05D003214 ORTHO05D004330 5.9e-11 70.9 68 55.9
ClCG02G012090 Citrullus lanatus HOM05D003214 ORTHO05D004330 5.9e-11 70.9 68 51.5
ECA196G0013 Erigeron canadensis HOM05D003214 ORTHO05D004330 5.9e-11 70.9 69 52.2
FvH4_2g15650 Fragaria vesca HOM05D003214 ORTHO05D004330 5.9e-11 70.9 69 53.6
HanXRQChr02g0040581 Helianthus annuus HOM05D003214 ORTHO05D004330 5.9e-11 70.9 69 52.2
arahy.Tifrunner.gnm1.ann1.L5LJLM Arachis hypogaea HOM05D003214 ORTHO05D004330 7.8e-11 70.5 69 53.6
CsaV3_2G016250 Cucumis sativus L. HOM05D003214 ORTHO05D004330 7.8e-11 70.5 69 52.2
FAN15G1272 Fragaria x ananassa HOM05D003214 ORTHO05D004330 1.0e-10 70.1 68 52.9
FAN27G1670 Fragaria x ananassa HOM05D003214 ORTHO05D004330 1.0e-10 70.1 68 52.9
RcHm_v2.0_Chr6g0278851 Rosa chinensis HOM05D003214 ORTHO05D004330 1.0e-10 70.1 69 52.2
Duzib093G0144 Durio zibethinus HOM05D003214 ORTHO05D004330 1.3e-10 69.7 78 48.7
Lalb_Chr02g0143501 Lupinus albus HOM05D003214 ORTHO05D004330 1.3e-10 69.7 69 55.1
Manes.05G143000 Manihot esculenta HOM05D003214 ORTHO05D004330 1.3e-10 69.7 69 50.7
CANSAT25G3225 Cannabis sativa HOM05D003214 ORTHO05D004330 1.7e-10 69.3 69 53.6
Prupe.8G169000 Prunus persica HOM05D003214 ORTHO05D004330 1.7e-10 69.3 69 50.7
GSVIVG01008744001 Vitis vinifera HOM05D003214 ORTHO05D004330 1.7e-10 69.3 68 54.4
Cc09_g10320 Coffea canephora HOM05D003214 ORTHO05D004330 2.3e-10 68.9 78 48.7
PSO675G3496 Papaver somniferum HOM05D003214 ORTHO05D004330 2.3e-10 68.9 69 52.2
Lalb_Chr21g0307001 Lupinus albus HOM05D003214 ORTHO05D004330 2.9e-10 68.6 69 52.2
Actinidia18041 Actinidia chinensis HOM05D003214 ORTHO05D004330 3.8e-10 68.2 68 51.5
Atru.chr13.221 Acer truncatum HOM05D003214 ORTHO05D004330 5.0e-10 67.8 67 52.2
Eucgr.F03709 Eucalyptus grandis HOM05D003214 ORTHO05D004330 5.0e-10 67.8 69 50.7
FAN20G2853 Fragaria x ananassa HOM05D003214 ORTHO05D004330 5.0e-10 67.8 68 51.5
THA.LOC104804319 Tarenaya hassleriana HOM05D003214 ORTHO05D004330 6.6e-10 67.4 69 47.8
Gohir.D01G001600 Gossypium hirsutum HOM05D003214 ORTHO05D004330 8.6e-10 67.0 69 52.2
Gorai.002G002200 Gossypium raimondii HOM05D003214 ORTHO05D004330 8.6e-10 67.0 69 52.2
Actinidia20525 Actinidia chinensis HOM05D003214 ORTHO05D004330 1.1e-09 66.6 64 53.1
unitig_21.g20525 Utricularia gibba HOM05D003214 ORTHO05D004330 1.1e-09 66.6 74 50.0
Gohir.A01G002000 Gossypium hirsutum HOM05D003214 ORTHO05D004330 2.5e-09 65.5 69 50.7
THA.LOC104819659 Tarenaya hassleriana HOM05D003214 ORTHO05D004330 2.5e-09 65.5 68 47.1
CDE08G0902 Ceratophyllum demersum HOM05D003214 ORTHO05D004330 3.3e-09 65.1 65 49.2
Sed0023751 Sechium edule HOM05D003214 ORTHO05D004330 9.5e-09 63.5 69 44.9
MD10G1127800 Malus domestica HOM05D003214 ORTHO05D004330 1.6e-08 62.8 68 45.6
CDE06G1850 Ceratophyllum demersum HOM05D003214 ORTHO05D004330 3.6e-08 61.6 62 50.0
EL10Ac8g18581 Beta vulgaris HOM05D003214 ORTHO05D004330 4.7e-08 61.2 69 47.8
Sc15g0002120 Simmondsia chinensis HOM05D003214 ORTHO05D004330 4.7e-08 61.2 69 49.3
Thecc.08G051200 Theobroma cacao HOM05D003214 ORTHO05D004330 4.7e-08 61.2 78 43.6
Aa31LG8G14130 Aethionema arabicum HOM05D003214 ORTHO05D004330 6.1e-08 60.8 68 44.1
MD05G1125000 Malus domestica HOM05D003214 ORTHO05D004330 1.0e-07 60.1 68 44.1
Thhalv10022538m.g Eutrema salsugineum HOM05D003214 ORTHO05D004330 1.8e-07 59.3 68 42.6
Sp3g30230 Schrenkiella parvula HOM05D003214 ORTHO05D004330 1.8e-07 59.3 68 42.6
HPP92_006849 Vanilla planifolia HOM05D003214 ORTHO05D004330 1.8e-07 59.3 69 46.4
BcaB08g34680 Brassica carinata HOM05D003214 ORTHO05D004330 4.0e-07 58.2 68 42.6
HPP92_006866 Vanilla planifolia HOM05D003214 ORTHO05D004330 4.0e-07 58.2 69 44.9
BcaB03g16429 Brassica carinata HOM05D003214 ORTHO05D004330 6.8e-07 57.4 67 41.8
BcaC01g02966 Brassica carinata HOM05D003214 ORTHO05D004330 6.8e-07 57.4 68 42.6
BcaC06g36202 Brassica carinata HOM05D003214 ORTHO05D004330 6.8e-07 57.4 67 41.8
A07p04130 Brassica napus HOM05D003214 ORTHO05D004330 6.8e-07 57.4 67 41.8
C03p57710 Brassica napus HOM05D003214 ORTHO05D004330 6.8e-07 57.4 68 42.6
C07p06530 Brassica napus HOM05D003214 ORTHO05D004330 6.8e-07 57.4 67 41.8
BolC7t41074H Brassica oleracea HOM05D003214 ORTHO05D004330 6.8e-07 57.4 67 41.8
Carub.0003s3076 Capsella rubella HOM05D003214 ORTHO05D004330 6.8e-07 57.4 68 41.2
BcaC04g23002 Brassica carinata HOM05D003214 ORTHO05D004330 8.9e-07 57.0 68 41.2
C09p13150 Brassica napus HOM05D003214 ORTHO05D004330 8.9e-07 57.0 68 41.2
BolC9t54210H Brassica oleracea HOM05D003214 ORTHO05D004330 8.9e-07 57.0 68 41.2
AT2G16950 Arabidopsis thaliana HOM05D003214 ORTHO05D004330 1.2e-06 56.6 68 39.7
AL3G49700 Arabidopsis lyrata HOM05D003214 ORTHO05D004330 2.6e-06 55.5 68 39.7
BraA03t13744Z Brassica rapa HOM05D003214 ORTHO05D004330 2.6e-06 55.5 76 39.5
SEGI_16409 Sequoiadendron giganteum HOM05D003214 ORTHO05D004330 2.6e-06 55.5 67 43.3
A03p46190 Brassica napus HOM05D003214 ORTHO05D004330 3.4e-06 55.1 69 44.9
CARHR107250 Cardamine hirsuta HOM05D003214 ORTHO05D004330 4.4e-06 54.7 69 42.0
A09p11160 Brassica napus HOM05D003214 ORTHO05D004330 5.7e-06 54.3 68 39.7
BraA09t36758Z Brassica rapa HOM05D003214 ORTHO05D004330 5.7e-06 54.3 68 39.7
Gohir.A03G205850 Gossypium hirsutum HOM05D003214 ORTHO05D004330 5.7e-06 54.3 68 44.1
Gohir.D02G227200 Gossypium hirsutum HOM05D003214 ORTHO05D004330 5.7e-06 54.3 68 44.1
Gorai.005G255100 Gossypium raimondii HOM05D003214 ORTHO05D004330 5.7e-06 54.3 68 44.1
Sed0004428 Sechium edule HOM05D003214 ORTHO05D004330 5.7e-06 54.3 67 38.8


User provided reference genes

Program Settings