Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 3.3e-203 711.4 351 100.0
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 6.7e-172 607.4 347 87.9
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 4.5e-152 541.6 360 78.3
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 1.9e-142 509.6 351 75.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 4.0e-132 475.3 266 87.6
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 7.5e-131 471.1 266 86.5
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 9.2e-129 464.2 350 67.7
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 4.3e-126 455.3 350 66.6
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 8.3e-122 441.0 349 65.0
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 4.1e-121 438.7 350 64.0
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 1.3e-119 433.7 350 63.4
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 6.6e-119 431.4 353 62.9
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.1e-118 430.6 352 62.8
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 5.6e-118 428.3 350 64.3
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 9.5e-118 427.6 347 63.1
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 1.8e-116 423.3 351 60.7
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.7e-114 416.8 334 63.5
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 3.7e-114 415.6 352 59.4
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 4.9e-114 415.2 356 59.8
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 6.4e-114 414.8 334 63.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 5.4e-113 411.8 353 60.6
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.2e-112 410.6 357 58.8
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.1e-112 409.8 344 61.3
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 2.7e-112 409.5 350 60.6
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 3.5e-112 409.1 350 60.0
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 4.6e-112 408.7 349 61.3
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 3.0e-111 406.0 350 60.9
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.5e-110 403.7 356 58.1
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.9e-110 403.3 348 58.9
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.3e-110 402.5 334 60.5
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 5.6e-110 401.7 369 57.2
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 7.3e-110 401.4 354 60.5
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 9.6e-110 401.0 342 59.4
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 6.8e-108 394.8 350 56.9
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.2e-107 394.0 346 59.5
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 1.2e-107 394.0 281 67.6
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.0e-107 393.3 344 59.0
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 3.4e-107 392.5 353 59.8
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 4.4e-107 392.1 305 63.3
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 4.4e-107 392.1 342 59.1
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.3e-106 390.6 356 58.4
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 2.9e-106 389.4 346 57.5
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 2.9e-106 389.4 289 64.7
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 2.4e-105 386.3 355 58.6
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 3.2e-105 386.0 346 59.8
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 2.7e-104 382.9 335 60.0
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 3.0e-103 379.4 269 66.5
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 3.9e-103 379.0 398 53.5
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 8.7e-103 377.9 347 56.5
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.5e-102 376.3 347 57.1
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.3e-102 375.9 336 60.4
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.3e-102 375.6 350 59.4
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 9.6e-102 374.4 290 63.4
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.3e-101 374.0 353 54.4
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 2.8e-101 372.9 349 57.0
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 2.8e-101 372.9 350 56.3
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 4.8e-101 372.1 349 56.7
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 9.0e-100 367.9 350 55.4
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 3.4e-99 365.9 366 52.7
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 3.4e-99 365.9 229 73.8
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.4e-99 365.5 306 61.1
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 9.9e-99 364.4 351 55.6
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.9e-98 362.8 339 58.4
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 6.4e-98 361.7 339 56.0
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 2.4e-97 359.8 346 55.8
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 7.1e-97 358.2 345 54.8
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 9.3e-97 357.8 339 56.9
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.2e-96 357.5 237 69.2
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.2e-96 357.5 237 69.2
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.2e-96 357.5 353 55.2
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.2e-96 357.5 232 69.4
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.6e-96 357.1 346 54.6
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 7.8e-96 354.8 318 56.9
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.3e-95 354.0 354 54.8
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.3e-95 353.2 237 68.4
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 5.1e-95 352.1 344 53.5
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.9e-94 350.1 372 53.0
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.9e-94 350.1 372 53.0
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 7.3e-94 348.2 342 53.8
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 5.3e-92 342.0 209 76.6
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 6.9e-92 341.7 441 47.4
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 3.8e-90 335.9 221 67.9
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.4e-89 334.0 216 73.6
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 2.1e-88 330.1 336 53.0
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 4.6e-88 328.9 231 68.8
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.0e-87 327.8 323 53.6
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 3.9e-87 325.9 351 52.7
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.6e-85 320.5 199 74.9
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.7e-77 292.7 350 48.6
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 2.6e-75 286.6 174 70.7
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.3e-74 284.3 274 56.6
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 1.8e-71 273.9 249 60.2
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 5.1e-71 272.3 268 48.5
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 3.3e-70 269.6 264 50.4
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.1e-68 264.6 251 58.6
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 2.4e-68 263.5 284 52.1
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 5.3e-68 262.3 227 54.6
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 1.5e-67 260.8 292 51.7
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 2.9e-66 256.5 222 52.7
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 5.5e-65 252.3 301 48.2
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 3.3e-62 243.0 261 53.3
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 7.4e-62 241.9 232 53.0
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 7.4e-62 241.9 232 53.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 1.0e-47 194.9 244 41.4
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 3.8e-42 176.4 212 42.5
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.4e-36 157.1 108 65.7
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.5e-35 152.9 108 64.8
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 5.5e-33 146.0 104 64.4
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 4.7e-32 142.9 169 50.3
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 2.2e-29 134.0 97 59.8
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 6.4e-21 105.9 167 39.5
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 1.6e-19 101.3 140 49.3
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 3.2e-12 77.0 45 73.3
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 2.0e-11 74.3 252 28.6
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 2.3e-10 70.9 50 64.0
Solyc07g045280.3 Solanum lycopersicum HOM05D006836 ORTHO05D008691 8.6e-10 68.9 32 87.5
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 3.3e-09 67.0 141 36.9
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 9.5e-09 65.5 141 36.2
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 1.1e-07 62.0 89 38.2


User provided reference genes

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