Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004844g0060 Nicotiana tabacum HOM05D002020 ORTHO05D002046 3.6e-61 238.0 119 100.0
Nitab4.5_0011770g0010 Nicotiana tabacum HOM05D002020 ORTHO05D002046 6.7e-31 137.5 78 87.2
Nitab4.5_0002880g0090 Nicotiana tabacum HOM05D002020 ORTHO05D002046 2.0e-27 125.9 67 94.0
PGSC0003DMG400003549 Solanum tuberosum HOM05D002020 ORTHO05D002046 9.3e-25 117.1 78 75.6
Peaxi162Scf00083g00118 Petunia axillaris HOM05D002020 ORTHO05D002046 1.6e-24 116.3 78 75.6
CAN.G1505.17 Capsicum annuum HOM05D002020 ORTHO05D002046 1.3e-23 113.2 78 74.4
Sopen02g029110 Solanum pennellii HOM05D002020 ORTHO05D002046 6.7e-23 110.9 78 74.4
Solyc02g084400.4 Solanum lycopersicum HOM05D002020 ORTHO05D002046 1.3e-21 106.7 78 71.8
PGSC0003DMG400005040 Solanum tuberosum HOM05D002020 ORTHO05D002046 8.2e-13 77.4 67 55.2
Nitab4.5_0005304g0020 Nicotiana tabacum HOM05D002020 ORTHO05D002046 1.1e-12 77.0 79 49.4
Nitab4.5_0000273g0220 Nicotiana tabacum HOM05D002020 ORTHO05D002046 1.8e-12 76.3 79 49.4
Actinidia11815 Actinidia chinensis HOM05D002020 ORTHO05D002046 2.4e-12 75.9 75 48.0
CAN.G289.25 Capsicum annuum HOM05D002020 ORTHO05D002046 2.4e-12 75.9 79 46.8
Solyc03g006660.3 Solanum lycopersicum HOM05D002020 ORTHO05D002046 2.4e-12 75.9 78 50.0
Sopen03g002670 Solanum pennellii HOM05D002020 ORTHO05D002046 2.4e-12 75.9 78 50.0
Dinv40469 Davidia involucrata HOM05D002020 ORTHO05D002046 3.1e-12 75.5 75 56.0
DCAR_008085 Daucus carota HOM05D002020 ORTHO05D002046 5.3e-12 74.7 69 53.6
CSS0010338 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 9.1e-12 73.9 61 60.7
CSS0048663 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 1.5e-11 73.2 92 47.8
Hma1.2p1_1515F.1_g288160 Hydrangea macrophylla HOM05D002020 ORTHO05D002046 1.5e-11 73.2 62 62.9
TWI63G0918 Tripterygium wilfordii HOM05D002020 ORTHO05D002046 1.5e-11 73.2 100 42.0
CSS0020910 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 2.0e-11 72.8 74 52.7
Oeu030049.1 Olea europaea HOM05D002020 ORTHO05D002046 2.0e-11 72.8 90 43.3
Actinidia24052 Actinidia chinensis HOM05D002020 ORTHO05D002046 4.5e-11 71.6 60 58.3
Migut.H01524 Erythranthe guttata HOM05D002020 ORTHO05D002046 7.7e-11 70.9 82 42.7
HanXRQChr15g0482581 Helianthus annuus HOM05D002020 ORTHO05D002046 7.7e-11 70.9 79 48.1
Peaxi162Scf00137g02116 Petunia axillaris HOM05D002020 ORTHO05D002046 7.7e-11 70.9 79 43.0
Cc02_g12310 Coffea canephora HOM05D002020 ORTHO05D002046 1.0e-10 70.5 77 49.4
Thecc.06G201600 Theobroma cacao HOM05D002020 ORTHO05D002046 1.0e-10 70.5 65 52.3
Oeu021582.1 Olea europaea HOM05D002020 ORTHO05D002046 1.7e-10 69.7 78 42.3
TWI38G0928 Tripterygium wilfordii HOM05D002020 ORTHO05D002046 1.7e-10 69.7 77 45.5
COL.COLO4_31626 Corchorus olitorius HOM05D002020 ORTHO05D002046 2.9e-10 68.9 68 52.9
Rhsim02G0118900 Rhododendron simsii HOM05D002020 ORTHO05D002046 3.8e-10 68.6 61 57.4
Oeu038205.1 Olea europaea HOM05D002020 ORTHO05D002046 8.5e-10 67.4 61 45.9
Hma1.2p1_0827F.1_g224940 Hydrangea macrophylla HOM05D002020 ORTHO05D002046 1.1e-09 67.0 75 45.3
ECA236G1796 Erigeron canadensis HOM05D002020 ORTHO05D002046 1.4e-09 66.6 60 55.0
Dinv18982 Davidia involucrata HOM05D002020 ORTHO05D002046 1.9e-09 66.2 75 49.3
DCAR_028147 Daucus carota HOM05D002020 ORTHO05D002046 3.2e-09 65.5 66 51.5
Duzib235G1439 Durio zibethinus HOM05D002020 ORTHO05D002046 4.2e-09 65.1 94 42.6
Gohir.A10G022000 Gossypium hirsutum HOM05D002020 ORTHO05D002046 5.5e-09 64.7 94 43.6
Manes.16G019500 Manihot esculenta HOM05D002020 ORTHO05D002046 5.5e-09 64.7 65 53.8
Migut.M01226 Erythranthe guttata HOM05D002020 ORTHO05D002046 9.4e-09 63.9 61 47.5
Lj1C1214T5 Lonicera japonica HOM05D002020 ORTHO05D002046 9.4e-09 63.9 65 49.2
MSTRG.13175 Avicennia marina HOM05D002020 ORTHO05D002046 1.2e-08 63.5 79 36.7
CANSAT78G0174 Cannabis sativa HOM05D002020 ORTHO05D002046 1.2e-08 63.5 59 50.8
Gohir.D10G022800 Gossypium hirsutum HOM05D002020 ORTHO05D002046 1.2e-08 63.5 65 52.3
Duzib160G0865 Durio zibethinus HOM05D002020 ORTHO05D002046 2.1e-08 62.8 65 47.7
Sabra04G0018900 Salix brachista HOM05D002020 ORTHO05D002046 2.1e-08 62.8 66 51.5
Lsat_1_v5_gn_1_122220 Lactuca sativa HOM05D002020 ORTHO05D002046 2.7e-08 62.4 74 45.9
Gorai.011G023900 Gossypium raimondii HOM05D002020 ORTHO05D002046 6.1e-08 61.2 65 49.2
Thecc.06G201700 Theobroma cacao HOM05D002020 ORTHO05D002046 6.1e-08 61.2 65 46.2
Prupe.4G034900 Prunus persica HOM05D002020 ORTHO05D002046 7.9e-08 60.8 83 39.8
Cfa006138 Carpinus fangiana HOM05D002020 ORTHO05D002046 1.0e-07 60.5 65 49.2
Ciclev10014596m.g Citrus clementina HOM05D002020 ORTHO05D002046 1.0e-07 60.5 70 47.1
Glyma.15G066700 Glycine max HOM05D002020 ORTHO05D002046 1.0e-07 60.5 68 54.4
Haze_08603 Corylus avellana HOM05D002020 ORTHO05D002046 1.4e-07 60.1 65 49.2
Gohir.D09G070500 Gossypium hirsutum HOM05D002020 ORTHO05D002046 1.4e-07 60.1 65 52.3
Gorai.006G085200 Gossypium raimondii HOM05D002020 ORTHO05D002046 1.4e-07 60.1 65 52.3
Glyma.13G247300 Glycine max HOM05D002020 ORTHO05D002046 1.8e-07 59.7 82 47.6
Cfa003946 Carpinus fangiana HOM05D002020 ORTHO05D002046 2.3e-07 59.3 65 49.2
MD11G1235000 Malus domestica HOM05D002020 ORTHO05D002046 2.3e-07 59.3 82 41.5
Potri.004G032800 Populus trichocarpa HOM05D002020 ORTHO05D002046 2.3e-07 59.3 76 47.4
Potri.011G041500 Populus trichocarpa HOM05D002020 ORTHO05D002046 2.3e-07 59.3 90 42.2
MD05G1326600 Malus domestica HOM05D002020 ORTHO05D002046 3.0e-07 58.9 56 50.0
Sabra11G0028400 Salix brachista HOM05D002020 ORTHO05D002046 3.0e-07 58.9 61 54.1
MD10G1304700 Malus domestica HOM05D002020 ORTHO05D002046 3.9e-07 58.5 55 50.9
COL.COLO4_31625 Corchorus olitorius HOM05D002020 ORTHO05D002046 6.7e-07 57.8 53 54.7
HanXRQChr01g0004001 Helianthus annuus HOM05D002020 ORTHO05D002046 6.7e-07 57.8 66 50.0
Sc05g0008150 Simmondsia chinensis HOM05D002020 ORTHO05D002046 6.7e-07 57.8 77 41.6
Nn1g03851 Nelumbo nucifera HOM05D002020 ORTHO05D002046 8.8e-07 57.4 68 45.6
QL05p080967 Quercus lobata HOM05D002020 ORTHO05D002046 8.8e-07 57.4 81 42.0
Gohir.A09G070800 Gossypium hirsutum HOM05D002020 ORTHO05D002046 1.1e-06 57.0 65 49.2
Lj6g0026033 Lotus japonicus HOM05D002020 ORTHO05D002046 1.1e-06 57.0 68 51.5
Prupe.4G192100 Prunus persica HOM05D002020 ORTHO05D002046 1.1e-06 57.0 58 50.0
SalBow7G1541 Salvia bowleyana HOM05D002020 ORTHO05D002046 1.1e-06 57.0 79 39.2
FvH4_3g21150 Fragaria vesca HOM05D002020 ORTHO05D002046 1.5e-06 56.6 58 48.3
RcHm_v2.0_Chr5g0036231 Rosa chinensis HOM05D002020 ORTHO05D002046 1.5e-06 56.6 60 48.3
CiPaw.09G157200 Carya illinoinensis HOM05D002020 ORTHO05D002046 2.0e-06 56.2 58 44.8
SalBow8G3087 Salvia bowleyana HOM05D002020 ORTHO05D002046 2.0e-06 56.2 80 32.5
PSO210G1379 Papaver somniferum HOM05D002020 ORTHO05D002046 2.6e-06 55.8 65 46.2
RhsimUnG0258000 Rhododendron simsii HOM05D002020 ORTHO05D002046 2.6e-06 55.8 80 42.5
Sed0007419 Sechium edule HOM05D000934 ORTHO05D002046 2.6e-06 55.8 79 41.8
THA.LOC104823517 Tarenaya hassleriana HOM05D002020 ORTHO05D002046 3.3e-06 55.5 68 44.1
Ca_00231_v3 Cicer arietinum L. HOM05D002020 ORTHO05D002046 4.4e-06 55.1 68 48.5
COL.COLO4_31598 Corchorus olitorius HOM05D002020 ORTHO05D002046 4.4e-06 55.1 72 45.8
Thhalv10007063m.g Eutrema salsugineum HOM05D002020 ORTHO05D002046 5.7e-06 54.7 67 40.3
PSO210G2494 Papaver somniferum HOM05D002020 ORTHO05D002046 5.7e-06 54.7 68 39.7
Nn1g06815 Nelumbo nucifera HOM05D002020 ORTHO05D002046 7.4e-06 54.3 67 41.8
PGR042G3471 Punica granatum HOM05D002020 ORTHO05D002046 7.4e-06 54.3 65 46.2
Atru.chr10.2025 Acer truncatum HOM05D002020 ORTHO05D002046 9.7e-06 53.9 79 46.8
FAN16G0246 Fragaria x ananassa HOM05D002020 ORTHO05D002046 9.7e-06 53.9 60 43.3
Lalb_Chr20g0122361 Lupinus albus HOM05D002020 ORTHO05D002046 9.7e-06 53.9 76 43.4
Sp1g10020 Schrenkiella parvula HOM05D002020 ORTHO05D002046 9.7e-06 53.9 67 41.8


User provided reference genes

Program Settings