Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.1e-49 197.6 90 100.0
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 8.6e-31 136.7 91 73.6
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.6e-30 134.0 85 75.3
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.8e-28 129.0 91 68.1
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 5.8e-27 124.0 74 78.4
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.1e-25 119.8 95 66.3
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.7e-24 115.2 95 64.2
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 8.6e-23 110.2 94 62.8
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.6e-21 105.9 90 61.1
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.1e-21 105.5 54 85.2
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.7e-21 104.4 90 64.4
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.2e-21 104.0 51 88.2
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 1.4e-20 102.8 54 83.3
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 1.8e-20 102.4 96 61.5
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 1.2e-19 99.8 94 59.6
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.4e-19 98.2 54 79.6
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 4.4e-19 97.8 51 84.3
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 4.4e-19 97.8 51 84.3
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 9.9e-19 96.7 54 79.6
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 1.3e-18 96.3 89 59.6
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 1.7e-18 95.9 81 60.5
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 2.2e-18 95.5 59 74.6
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.8e-18 94.7 79 63.3
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 4.2e-17 91.3 54 79.6
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.2e-16 89.7 93 55.9
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 3.5e-16 88.2 56 73.2
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.0e-16 87.4 54 72.2
Solyc11g044665.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 1.1e-14 83.2 90 56.7
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 7.3e-14 80.5 77 55.8
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.1e-13 79.0 51 76.5
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 1.8e-12 75.9 69 58.0
Solyc03g150126.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 5.3e-12 74.3 83 54.2
Solyc03g058260.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 9.0e-12 73.6 58 62.1
Gohir.1Z049482 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.0e-11 72.4 58 67.2
BraSC59t46557Z Brassica rapa HOM05D008016 ORTHO05D004271 2.6e-11 72.0 59 67.8
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.6e-11 72.0 54 64.8
Nitab4.5_0005831g0110 Nicotiana tabacum HOM05D008016 ORTHO05D011667 3.4e-11 71.6 61 63.9
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 5.8e-11 70.9 60 60.0
Solyc06g043035.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 9.9e-11 70.1 36 88.9
RcHm_v2.0_Chr4g0392721 Rosa chinensis HOM05D008016 ORTHO05D004271 2.9e-10 68.6 59 64.4
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 3.8e-10 68.2 75 53.3
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 3.8e-10 68.2 75 53.3
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 3.8e-10 68.2 75 53.3
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.1e-09 66.6 35 85.7
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 1.9e-09 65.9 31 93.5
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 5.4e-09 64.3 50 64.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 7.1e-09 63.9 31 90.3
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 7.1e-09 63.9 31 90.3
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.1e-09 63.9 31 90.3
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 7.1e-09 63.9 31 90.3
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 9.3e-09 63.5 31 87.1
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 2.1e-08 62.4 52 65.4
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 2.1e-08 62.4 52 65.4
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 2.1e-08 62.4 52 65.4
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 2.1e-08 62.4 52 65.4
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 2.1e-08 62.4 52 65.4
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 2.1e-08 62.4 52 65.4
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.7e-08 62.0 31 83.9
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 6.0e-08 60.8 31 87.1
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 6.0e-08 60.8 31 87.1
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 6.0e-08 60.8 31 87.1
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 6.0e-08 60.8 31 87.1
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 7.8e-08 60.5 31 83.9
BolSC44t60833H Brassica oleracea HOM05D008016 ORTHO05D004271 1.0e-07 60.1 51 64.7
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 1.0e-07 60.1 58 62.1
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.3e-07 59.7 60 58.3
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 5.1e-07 57.8 29 86.2
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 6.6e-07 57.4 31 80.6
Lalb_Chr15g0080721 Lupinus albus HOM05D008016 ORTHO05D004271 6.6e-07 57.4 58 60.3
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.6e-07 57.4 29 86.2
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 8.7e-07 57.0 31 80.6
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.7e-07 57.0 32 78.1
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.9e-06 55.8 58 56.9
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 1.9e-06 55.8 58 56.9
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.9e-06 55.8 58 56.9
EL10As18g24159 Beta vulgaris HOM05D008037 ORTHO05D004271 2.5e-06 55.5 55 58.2
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 3.3e-06 55.1 31 80.6
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.3e-06 55.1 43 60.5
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 4.3e-06 54.7 31 80.6
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 5.6e-06 54.3 38 71.1
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 9.6e-06 53.5 27 85.2


User provided reference genes

Program Settings