Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004807g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.5e-72 273.5 130 100.0
Nitab4.5_0000908g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-58 229.6 143 79.0
Peaxi162Scf00074g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-43 179.5 143 65.0
Nitab4.5_0005962g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.6e-36 155.6 132 60.6
Peaxi162Scf00016g00259 Petunia axillaris HOM05D000007 ORTHO05D000039 5.4e-34 147.9 136 58.1
Nitab4.5_0008218g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.1e-33 146.0 138 55.8
Peaxi162Scf00094g02020 Petunia axillaris HOM05D000007 ORTHO05D000039 8.6e-32 140.6 138 56.5
Peaxi162Scf01093g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 4.3e-31 138.3 134 53.7
Peaxi162Scf00016g02536 Petunia axillaris HOM05D000007 ORTHO05D000039 1.2e-30 136.7 134 58.2
Peaxi162Scf00016g02525 Petunia axillaris HOM05D000007 ORTHO05D000039 1.6e-30 136.3 140 56.4
Nitab4.5_0009786g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.4e-28 128.6 100 67.0
Nitab4.5_0000908g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.9e-28 127.1 100 66.0
Peaxi162Scf00094g02018 Petunia axillaris HOM05D000007 ORTHO05D000039 7.1e-26 120.9 134 50.0
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 3.0e-24 115.5 143 47.6
Nitab4.5_0004807g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.9e-23 112.8 92 60.9
Peaxi162Scf01075g00007 Petunia axillaris HOM05D000007 ORTHO05D000039 3.3e-23 112.1 134 50.0
Peaxi162Scf00803g00055 Petunia axillaris HOM05D000007 ORTHO05D000039 5.6e-23 111.3 138 48.6
CAN.G78.127 Capsicum annuum HOM05D000007 ORTHO05D000039 3.6e-22 108.6 140 50.0
Peaxi162Scf00362g01132 Petunia axillaris HOM05D000007 ORTHO05D000039 4.7e-22 108.2 134 49.3
Peaxi162Scf00458g00008 Petunia axillaris HOM05D000007 ORTHO05D000039 3.4e-20 102.1 132 47.7
PGSC0003DMG400037388 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.9e-19 98.2 124 46.0
PGSC0003DMG400040421 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-17 93.2 134 46.3
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 2.7e-17 92.4 111 45.9
Peaxi162Scf00700g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 3.5e-17 92.0 141 36.9
Peaxi162Scf00700g00332 Petunia axillaris HOM05D000007 ORTHO05D000039 4.6e-17 91.7 127 43.3
PGSC0003DMG400041889 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.0e-17 91.3 121 43.0
PGSC0003DMG400046209 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.0e-17 91.3 123 43.9
Peaxi162Scf00700g00311 Petunia axillaris HOM05D000007 ORTHO05D000039 7.8e-17 90.9 136 38.2
Nitab4.5_0011885g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.0e-16 90.5 73 65.8
Sopen04g033920 Solanum pennellii HOM05D000044 ORTHO05D004555 1.7e-16 89.7 122 44.3
Nitab4.5_0007093g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.3e-16 89.4 130 43.1
Solyc04g080320.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.9e-16 88.6 122 44.3
Nitab4.5_0018243g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.1e-16 88.2 130 42.3
PGSC0003DMG400046539 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-15 87.0 124 45.2
Sopen10g005230 Solanum pennellii HOM05D000007 ORTHO05D000039 4.3e-15 85.1 123 41.5
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 5.6e-15 84.7 127 40.2
Solyc10g009450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 7.3e-15 84.3 122 41.8
PGSC0003DMG400003729 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-14 83.6 106 46.2
PGSC0003DMG400017392 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.1e-14 82.8 124 40.3
PGSC0003DMG400010976 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.6e-14 82.0 131 39.7
PGSC0003DMG400022112 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.8e-14 81.6 142 36.6
Nitab4.5_0000270g0310 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.2e-14 81.3 74 55.4
PGSC0003DMG400003781 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.2e-14 81.3 125 42.4
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.8e-13 79.7 103 38.8
Peaxi162Scf00803g00535 Petunia axillaris HOM05D000007 ORTHO05D000039 1.8e-13 79.7 100 49.0
Solyc10g009460.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.4e-13 79.3 122 41.8
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.0e-13 78.6 102 38.2
Lju41C12T10 Lonicera japonica HOM05D000007 ORTHO05D000039 5.3e-13 78.2 107 43.0
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 5.3e-13 78.2 108 44.4
Nitab4.5_0001530g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.0e-13 77.4 115 34.8
PGSC0003DMG400043031 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.0e-13 77.4 102 45.1
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-12 76.6 111 36.9
Nitab4.5_0001530g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-12 76.3 103 40.8
CAN.G319.8 Capsicum annuum HOM05D000007 ORTHO05D000039 4.4e-12 75.1 125 35.2
PGSC0003DMG400019996 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.4e-12 75.1 129 38.0
Lj2A997G27 Lonicera japonica HOM05D000007 ORTHO05D000039 9.9e-12 73.9 107 43.0
Lj5C836T5 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-11 73.2 111 38.7
Peaxi162Scf00700g00341 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-11 73.2 96 42.7
Lj5C842T1 Lonicera japonica HOM05D000007 ORTHO05D000039 4.9e-11 71.6 110 39.1
PGSC0003DMG400005153 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.4e-11 71.2 117 43.6
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.4e-11 71.2 105 41.9
Nitab4.5_0004807g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.4e-11 70.9 59 67.8
CAN.G656.20 Capsicum annuum HOM05D000007 ORTHO05D000039 1.4e-10 70.1 99 43.4
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-10 69.7 110 39.1
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.9e-10 69.7 106 40.6
PGSC0003DMG400030753 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.9e-10 69.7 113 34.5
Lj5C746G5 Lonicera japonica HOM05D000007 ORTHO05D000039 3.2e-10 68.9 120 39.2
Lju41C15G6 Lonicera japonica HOM05D000007 ORTHO05D000039 3.2e-10 68.9 111 38.7
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.2e-10 68.9 99 38.4
Lj2A996T28 Lonicera japonica HOM05D000007 ORTHO05D000039 4.2e-10 68.6 108 42.6
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.4e-10 68.2 102 36.3
CAN.G1034.1 Capsicum annuum HOM05D000007 ORTHO05D000039 7.1e-10 67.8 110 39.1
Lj6C102T0 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-10 67.8 98 40.8
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.1e-10 67.8 102 39.2
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 7.1e-10 67.8 130 31.5
Lj5C746T3 Lonicera japonica HOM05D000007 ORTHO05D000039 9.3e-10 67.4 108 39.8
Lj5C836T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-09 66.6 110 37.3
Lj7P401T27 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-09 66.6 105 39.0
CAN.G656.21 Capsicum annuum HOM05D000007 ORTHO05D000039 2.1e-09 66.2 132 37.9
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-09 66.2 126 34.9
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-09 66.2 122 36.1
Nitab4.5_0002547g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.1e-09 66.2 75 46.7
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.1e-09 66.2 102 38.2
PGSC0003DMG400043299 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.7e-09 65.9 78 46.2
CAN.G319.6 Capsicum annuum HOM05D000007 ORTHO05D000039 4.6e-09 65.1 99 38.4
Lj2C989T3 Lonicera japonica HOM05D000007 ORTHO05D000039 6.0e-09 64.7 122 36.9
PGSC0003DMG400039355 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.0e-09 64.7 102 38.2
PSO063G2578 Papaver somniferum HOM05D000007 ORTHO05D000017 7.8e-09 64.3 118 33.1
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-08 63.9 103 35.0
CAN.G475.39 Capsicum annuum HOM05D000007 ORTHO05D000039 1.3e-08 63.5 125 36.0
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 1.3e-08 63.5 121 33.1
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 1.7e-08 63.2 126 34.1
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.7e-08 63.2 106 36.8
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.3e-08 62.8 77 44.2
Solyc06g059820.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.9e-08 62.0 86 34.9
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 5.1e-08 61.6 106 39.6
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 6.6e-08 61.2 106 41.5
Lj2C996T7 Lonicera japonica HOM05D000007 ORTHO05D000039 6.6e-08 61.2 113 41.6
Lj5C747T5 Lonicera japonica HOM05D000007 ORTHO05D000039 6.6e-08 61.2 120 35.8
RcHm_v2.0_Chr2g0154611 Rosa chinensis HOM05D000007 ORTHO05D000017 6.6e-08 61.2 101 37.6
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-07 60.5 107 38.3
Lju41C24G4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-07 60.1 105 40.0
Nitab4.5_0001821g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.5e-07 60.1 79 41.8
Lj2C997T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-07 59.7 133 36.1
Lj5C747T4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-07 59.7 114 36.0
CAN.G723.19 Capsicum annuum HOM05D000007 ORTHO05D000039 2.5e-07 59.3 102 33.3
Cfa007607 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.3e-07 58.5 71 43.7
CiPaw.07G037600 Carya illinoinensis HOM05D000007 ORTHO05D000017 4.3e-07 58.5 76 40.8
QL03p024057 Quercus lobata HOM05D000007 ORTHO05D000039 4.3e-07 58.5 100 35.0
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.6e-07 58.2 91 38.5
Aqoxy5G02941 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 7.3e-07 57.8 110 33.6
PSO832G0828 Papaver somniferum HOM05D000007 ORTHO05D000017 7.3e-07 57.8 98 35.7
QL03p023798 Quercus lobata HOM05D000007 ORTHO05D000039 7.3e-07 57.8 94 35.1
QL03p023874 Quercus lobata HOM05D000007 ORTHO05D000039 7.3e-07 57.8 94 35.1
Lj7A0G37 Lonicera japonica HOM05D000007 ORTHO05D000039 9.6e-07 57.4 94 38.3
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 1.3e-06 57.0 106 34.0
Aqoxy6G02038 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 1.6e-06 56.6 85 36.5
Cfa007606 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-06 56.6 71 42.3
Cfa007564 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-06 56.2 71 42.3
Hma1.2p1_1292F.1_g273710 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.1e-06 56.2 110 33.6
Peaxi162Scf00290g00102 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-06 56.2 104 34.6
Peaxi162Scf00481g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-06 56.2 132 31.8
CiPaw.03G025900 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.8e-06 55.8 73 42.5
FvH4_3g41160 Fragaria vesca HOM05D000007 ORTHO05D000017 2.8e-06 55.8 106 39.6
RcHm_v2.0_Chr2g0154601 Rosa chinensis HOM05D000007 ORTHO05D000017 2.8e-06 55.8 99 35.4
Lj5P838T12 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-06 55.5 106 31.1
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.8e-06 55.1 71 43.7
Ciclev10027421m.g Citrus clementina HOM05D000007 ORTHO05D000039 4.8e-06 55.1 102 34.3
Eucgr.H02744 Eucalyptus grandis HOM05D000007 ORTHO05D000017 4.8e-06 55.1 94 38.3
FAN25G0779 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.8e-06 55.1 98 30.6
Lj1C724G4 Lonicera japonica HOM05D000007 ORTHO05D000039 4.8e-06 55.1 74 41.9
Sc21g0002920 Simmondsia chinensis HOM05D000007 ORTHO05D000039 4.8e-06 55.1 83 36.1
ECA233G1576 Erigeron canadensis HOM05D000007 ORTHO05D000039 6.2e-06 54.7 107 35.5
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 6.2e-06 54.7 73 41.1
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 8.1e-06 54.3 76 35.5
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 8.1e-06 54.3 101 35.6
Aqoxy1G03420 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 8.1e-06 54.3 80 37.5
Aqoxy3G01955 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 8.1e-06 54.3 81 34.6
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.1e-06 54.3 75 40.0
Gorai.004G022000 Gossypium raimondii HOM05D000007 ORTHO05D000017 8.1e-06 54.3 121 34.7
RcHm_v2.0_Chr2g0167131 Rosa chinensis HOM05D000007 ORTHO05D000017 8.1e-06 54.3 99 32.3
TAR624G0325 Trochodendron aralioides HOM05D000007 ORTHO05D000017 8.1e-06 54.3 92 39.1


User provided reference genes

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