Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.4e-42 174.5 81 100.0
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-37 158.7 78 94.9
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.8e-35 149.8 80 82.5
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.8e-35 149.8 80 82.5
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 8.8e-35 149.8 80 85.0
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 8.8e-35 149.8 80 82.5
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 2.6e-34 148.3 80 81.2
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 3.4e-34 147.9 80 81.2
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 5.7e-34 147.1 80 80.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 5.7e-34 147.1 80 85.0
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 5.7e-34 147.1 80 80.0
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 1.3e-33 146.0 80 81.2
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.7e-33 145.6 80 78.8
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.7e-33 145.6 80 78.8
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.8e-33 144.8 80 81.2
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 3.7e-33 144.4 80 81.2
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 4.9e-33 144.1 80 77.5
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.3e-33 143.3 80 77.5
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 8.3e-33 143.3 80 80.0
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 1.1e-32 142.9 80 76.2
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 1.1e-32 142.9 80 78.8
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.1e-32 142.9 80 78.8
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.1e-32 142.9 80 78.8
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.1e-32 142.9 80 78.8
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.1e-32 142.9 80 78.8
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.8e-32 142.1 80 80.0
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.8e-32 142.1 80 80.0
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.4e-32 141.7 80 76.2
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 3.1e-32 141.4 80 78.8
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.1e-32 141.0 80 76.2
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 4.1e-32 141.0 80 81.2
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 4.1e-32 141.0 80 78.8
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 5.4e-32 140.6 80 77.5
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 5.4e-32 140.6 80 77.5
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 5.4e-32 140.6 80 76.2
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 5.4e-32 140.6 80 77.5
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 5.4e-32 140.6 80 77.5
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 7.0e-32 140.2 80 77.5
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 7.0e-32 140.2 80 76.2
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 7.0e-32 140.2 78 78.2
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 7.0e-32 140.2 80 76.2
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 7.0e-32 140.2 78 78.2
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 7.0e-32 140.2 78 78.2
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.2e-32 139.8 80 76.2
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 9.2e-32 139.8 80 76.2
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 9.2e-32 139.8 80 75.0
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 9.2e-32 139.8 80 75.0
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.2e-31 139.4 80 75.0
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.2e-31 139.4 80 77.5
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.6e-31 139.0 80 76.2
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.6e-31 139.0 80 75.0
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 1.6e-31 139.0 80 76.2
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 1.6e-31 139.0 80 75.0
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 2.0e-31 138.7 80 76.2
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.0e-31 138.7 80 76.2
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 2.0e-31 138.7 78 76.9
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 2.7e-31 138.3 78 76.9
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 3.5e-31 137.9 80 73.8
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 3.5e-31 137.9 80 76.2
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 3.5e-31 137.9 80 76.2
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 5.9e-31 137.1 80 77.5
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 5.9e-31 137.1 80 76.2
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 7.8e-31 136.7 80 72.5
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 7.8e-31 136.7 80 73.8
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.0e-30 136.3 80 72.5
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.3e-30 136.0 80 75.0
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.3e-30 136.0 80 75.0
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.3e-30 136.0 80 76.2
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 1.7e-30 135.6 80 75.0
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 2.3e-30 135.2 78 76.9
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 2.3e-30 135.2 80 72.5
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 2.3e-30 135.2 80 72.5
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 2.9e-30 134.8 78 75.6
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 3.8e-30 134.4 80 75.0
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 5.0e-30 134.0 80 72.5
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 6.6e-30 133.7 80 73.8
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 6.6e-30 133.7 80 70.0
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 6.6e-30 133.7 80 72.5
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.1e-29 132.9 78 75.6
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.1e-29 132.9 80 72.5
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 1.5e-29 132.5 80 72.5
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.9e-29 132.1 80 73.8
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.5e-29 131.7 80 75.0
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 3.3e-29 131.3 78 70.5
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 3.3e-29 131.3 80 70.0
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 4.3e-29 131.0 80 71.2
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 4.3e-29 131.0 80 75.0
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 5.6e-29 130.6 80 70.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.6e-29 130.6 100 61.0
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 5.6e-29 130.6 80 70.0
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.6e-29 130.6 80 70.0
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.6e-29 130.6 80 70.0
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.6e-29 130.6 80 70.0
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.6e-29 130.6 80 70.0
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 5.6e-29 130.6 80 70.0
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 1.2e-28 129.4 80 73.8
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.2e-28 129.4 80 71.2
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.2e-28 129.4 80 71.2
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.1e-28 128.6 91 71.4
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 4.7e-28 127.5 77 72.7
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 6.1e-28 127.1 80 70.0
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.1e-28 127.1 80 68.8
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 6.1e-28 127.1 80 72.5
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 6.1e-28 127.1 102 61.8
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-27 126.3 67 82.1
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 2.3e-27 125.2 80 68.8
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 4.0e-27 124.4 80 67.5
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 5.2e-27 124.0 84 70.2
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 1.2e-26 122.9 80 66.2
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 3.4e-26 121.3 80 63.8
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 4.4e-26 120.9 80 67.5
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 5.7e-26 120.6 80 66.2
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 5.7e-26 120.6 80 66.2
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 9.8e-26 119.8 76 68.4
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 9.8e-26 119.8 76 68.4
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 9.8e-26 119.8 76 68.4
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.3e-25 119.4 80 63.8
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.7e-25 119.0 76 67.1
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.7e-25 119.0 76 67.1
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.7e-25 119.0 76 67.1
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.7e-25 119.0 76 67.1
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.7e-25 119.0 76 67.1
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.7e-25 117.9 74 66.2
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.9e-25 117.5 76 65.8
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.4e-24 115.9 80 63.8
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.2e-24 114.8 76 64.5
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 3.5e-23 111.3 62 75.8
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.0e-22 109.8 80 61.2
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 6.6e-22 107.1 56 82.1
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 6.2e-20 100.5 61 75.4
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 8.0e-20 100.1 62 71.0
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 6.8e-19 97.1 61 72.1
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.2e-18 96.3 75 57.3
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.9e-17 91.7 56 69.6
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.4e-11 72.8 57 54.4
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 8.9e-11 70.1 55 61.8
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 2.6e-10 68.6 58 51.7


User provided reference genes

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