Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.4e-78 294.7 232 100.0
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.2e-60 237.3 147 84.4
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 2.1e-60 236.5 141 86.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.7e-59 233.4 145 86.2
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 5.6e-58 228.4 142 85.9
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 2.0e-55 219.9 146 80.8
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.3e-51 207.2 141 74.5
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.3e-51 207.2 135 77.8
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.3e-51 207.2 135 77.8
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 5.1e-51 205.3 143 72.7
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 6.6e-51 204.9 141 73.0
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.1e-50 204.1 145 73.1
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 1.5e-50 203.8 141 73.0
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 7.3e-50 201.4 133 75.9
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 9.6e-50 201.1 138 73.9
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 1.3e-49 200.7 150 70.0
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.6e-49 200.3 138 74.6
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 2.1e-49 199.9 142 73.9
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.1e-49 199.9 147 70.7
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.8e-49 199.5 138 74.6
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 4.8e-49 198.7 141 72.3
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 1.1e-48 197.6 136 72.8
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.8e-48 196.8 135 71.9
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 5.3e-48 195.3 145 70.3
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 6.9e-48 194.9 142 71.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 9.0e-48 194.5 150 68.0
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.2e-47 194.1 147 66.7
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.0e-47 193.4 131 75.6
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 2.0e-47 193.4 139 71.9
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 3.4e-47 192.6 138 71.0
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.5e-47 192.2 142 70.4
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 9.9e-47 191.0 135 72.6
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 2.9e-46 189.5 133 69.9
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.8e-46 189.1 146 70.5
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 3.8e-46 189.1 140 71.4
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 6.4e-46 188.3 140 69.3
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.1e-45 187.6 138 69.6
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 1.1e-45 187.6 139 68.3
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.4e-45 187.2 135 69.6
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.4e-45 187.2 136 69.1
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.4e-45 187.2 136 71.3
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.9e-45 186.8 148 68.2
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.9e-45 186.8 148 67.6
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 3.2e-45 186.0 146 65.1
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 3.2e-45 186.0 140 68.6
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 5.4e-45 185.3 134 72.4
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 9.3e-45 184.5 136 69.9
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 9.3e-45 184.5 139 68.3
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 1.6e-44 183.7 136 67.6
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.6e-44 183.7 139 67.6
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.1e-44 183.3 106 92.5
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 2.1e-44 183.3 143 63.6
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 3.5e-44 182.6 140 67.1
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.5e-44 182.6 144 66.0
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 4.6e-44 182.2 144 63.9
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 4.6e-44 182.2 138 68.1
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 4.6e-44 182.2 138 67.4
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.6e-44 182.2 136 70.6
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 7.9e-44 181.4 147 64.6
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.3e-43 180.6 132 68.2
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.8e-43 180.3 148 67.6
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.3e-43 179.9 144 65.3
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 3.0e-43 179.5 135 65.9
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 3.0e-43 179.5 138 64.5
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.9e-43 179.1 146 64.4
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 6.7e-43 178.3 144 64.6
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 4.3e-42 175.6 138 63.8
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 4.3e-42 175.6 133 67.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 4.3e-42 175.6 135 66.7
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 5.6e-42 175.3 144 64.6
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 5.6e-42 175.3 144 64.6
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 5.6e-42 175.3 144 64.6
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 5.6e-42 175.3 144 64.6
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 5.6e-42 175.3 144 64.6
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 5.6e-42 175.3 131 70.2
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 9.6e-42 174.5 139 62.6
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 9.6e-42 174.5 131 68.7
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.3e-41 174.1 140 65.0
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-41 174.1 140 65.0
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.3e-41 174.1 139 64.7
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.3e-41 174.1 134 68.7
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 2.1e-41 173.3 144 63.2
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 2.1e-41 173.3 144 63.2
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.1e-41 173.3 131 68.7
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.8e-41 172.9 144 63.2
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 3.7e-41 172.6 138 63.0
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.7e-41 172.6 144 62.5
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 4.8e-41 172.2 144 61.8
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 4.8e-41 172.2 144 62.5
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.8e-41 172.2 137 66.4
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 4.8e-41 172.2 133 65.4
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 6.2e-41 171.8 140 64.3
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.4e-40 170.6 140 63.6
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.8e-40 170.2 138 63.0
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.0e-40 169.1 142 62.0
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.2e-39 167.5 135 66.7
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.5e-39 167.2 131 64.1
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.5e-39 167.2 138 60.9
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 2.0e-39 166.8 142 58.5
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 2.0e-39 166.8 142 58.5
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 4.5e-39 165.6 131 66.4
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.1e-37 161.0 126 64.3
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.2e-37 159.5 140 62.1
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.2e-37 159.5 135 63.7
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.7e-36 156.4 136 60.3
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 3.5e-36 156.0 130 63.1
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 6.0e-36 155.2 137 59.1
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.3e-35 154.1 132 62.9
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 5.1e-35 152.1 131 60.3
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.1e-34 151.0 145 57.9
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.3e-33 147.5 138 55.1
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.4e-32 144.1 138 54.3
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.4e-32 143.3 140 55.0
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 3.4e-31 139.4 140 53.6
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 3.4e-31 139.4 140 53.6
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 3.4e-31 139.4 140 53.6
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 5.8e-31 138.7 140 53.6
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 5.8e-31 138.7 140 53.6
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.0e-30 137.9 132 56.8
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-30 137.1 153 52.9
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 2.2e-30 136.7 138 54.3
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 2.2e-30 136.7 138 54.3
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 3.8e-30 136.0 131 53.4
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 4.9e-30 135.6 132 56.1
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 5.5e-29 132.1 141 53.2
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-28 131.0 148 50.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.7e-27 125.2 138 50.7
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 6.3e-25 118.6 107 57.9
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 5.3e-24 115.5 134 52.2
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 6.9e-24 115.2 138 50.7
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 2.6e-23 113.2 115 54.8
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.7e-22 110.5 143 46.9
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 8.5e-22 108.2 143 48.3
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 8.5e-22 108.2 143 48.3
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 6.7e-19 98.6 97 59.8
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.1e-18 97.8 68 75.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 9.7e-18 94.7 67 71.6
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 2.6e-07 60.1 133 34.6
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 2.6e-07 60.1 69 55.1
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 8.5e-06 55.1 55 54.5


User provided reference genes

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