Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004776g0110 Nicotiana tabacum HOM05D003041 ORTHO05D003400 1.7e-51 205.7 99 100.0
Peaxi162Scf00205g00119 Petunia axillaris HOM05D003041 ORTHO05D003400 1.2e-30 136.3 140 52.1
Haze_11021 Corylus avellana HOM05D003041 ORTHO05D003400 5.7e-28 127.5 140 50.7
Thecc.02G279900 Theobroma cacao HOM05D003041 ORTHO05D003400 5.7e-28 127.5 140 50.7
Atru.chr11.396 Acer truncatum HOM05D003041 ORTHO05D003400 1.3e-27 126.3 140 48.6
Cfa008593 Carpinus fangiana HOM05D003041 ORTHO05D003400 1.3e-27 126.3 140 50.0
Dinv05160 Davidia involucrata HOM05D003041 ORTHO05D003400 4.9e-27 124.4 140 47.9
Oeu036719.1 Olea europaea HOM05D003041 ORTHO05D003400 1.4e-26 122.9 140 48.6
Atru.chr11.1539 Acer truncatum HOM05D003041 ORTHO05D003400 1.8e-26 122.5 140 46.4
COL.COLO4_20466 Corchorus olitorius HOM05D003041 ORTHO05D003400 2.4e-26 122.1 141 48.9
Ciclev10014737m.g Citrus clementina HOM05D003041 ORTHO05D003400 4.1e-26 121.3 140 47.9
Nitab4.5_0004776g0020 Nicotiana tabacum HOM05D003041 ORTHO05D003400 4.1e-26 121.3 140 50.7
QL01p002017 Quercus lobata HOM05D003041 ORTHO05D003400 4.1e-26 121.3 140 47.1
Duzib251G0338 Durio zibethinus HOM05D003041 ORTHO05D003400 9.2e-26 120.2 140 48.6
Oeu045878.1 Olea europaea HOM05D003041 ORTHO05D003400 9.2e-26 120.2 140 48.6
Atru.chr1.911 Acer truncatum HOM05D003041 ORTHO05D003400 1.2e-25 119.8 140 47.9
Gohir.D02G145300 Gossypium hirsutum HOM05D003041 ORTHO05D003400 1.2e-25 119.8 140 47.9
Gorai.005G162700 Gossypium raimondii HOM05D003041 ORTHO05D003400 1.2e-25 119.8 140 47.9
FAN12G2939 Fragaria x ananassa HOM05D003041 ORTHO05D003400 1.6e-25 119.4 140 50.0
FAN17G2366 Fragaria x ananassa HOM05D003041 ORTHO05D003400 1.6e-25 119.4 140 50.0
TWI31G0001 Tripterygium wilfordii HOM05D003041 ORTHO05D003400 1.6e-25 119.4 140 47.9
COL.COLO4_20467 Corchorus olitorius HOM05D003041 ORTHO05D003400 2.0e-25 119.0 141 48.2
Duzib248G0865 Durio zibethinus HOM05D003041 ORTHO05D003400 3.5e-25 118.2 140 47.1
FvH4_4g32270 Fragaria vesca HOM05D003041 ORTHO05D003400 3.5e-25 118.2 140 49.3
Gohir.A03G122700 Gossypium hirsutum HOM05D003041 ORTHO05D003400 4.6e-25 117.9 140 46.4
Actinidia14957 Actinidia chinensis HOM05D003041 ORTHO05D003400 5.9e-25 117.5 140 45.7
Duzib268G0521 Durio zibethinus HOM05D003041 ORTHO05D003400 7.8e-25 117.1 140 47.1
RcHm_v2.0_Chr4g0441061 Rosa chinensis HOM05D003041 ORTHO05D003400 1.0e-24 116.7 142 47.2
PGSC0003DMG400030551 Solanum tuberosum HOM05D003041 ORTHO05D003400 1.0e-24 116.7 140 47.1
GSVIVG01011776001 Vitis vinifera HOM05D003041 ORTHO05D003400 1.0e-24 116.7 140 45.0
Actinidia14958 Actinidia chinensis HOM05D003041 ORTHO05D003400 1.3e-24 116.3 140 45.7
Manes.15G126800 Manihot esculenta HOM05D003041 ORTHO05D003400 1.3e-24 116.3 140 46.4
QL01p002000 Quercus lobata HOM05D003041 ORTHO05D003400 3.0e-24 115.2 140 47.9
GSVIVG01011773001 Vitis vinifera HOM05D003041 ORTHO05D003400 3.0e-24 115.2 140 45.7
CSS0038717 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 5.0e-24 114.4 140 46.4
COL.COLO4_20468 Corchorus olitorius HOM05D003041 ORTHO05D003400 5.0e-24 114.4 142 45.1
Sabra10G0084200 Salix brachista HOM05D003041 ORTHO05D003400 5.0e-24 114.4 140 45.7
CAN.G1334.9 Capsicum annuum HOM05D003041 ORTHO05D003400 6.6e-24 114.0 141 44.7
Haze_11020 Corylus avellana HOM05D003041 ORTHO05D003400 6.6e-24 114.0 140 43.6
Hma1.2p1_0464F.1_g158300 Hydrangea macrophylla HOM05D003041 ORTHO05D003400 8.6e-24 113.6 140 44.3
Atru.chr4.801 Acer truncatum HOM05D003041 ORTHO05D003400 1.1e-23 113.2 140 45.7
Migut.L00984 Erythranthe guttata HOM05D003041 ORTHO05D003400 1.1e-23 113.2 140 45.7
MD16G1029700 Malus domestica HOM05D003041 ORTHO05D003400 1.1e-23 113.2 140 45.0
Potri.010G114200 Populus trichocarpa HOM05D003041 ORTHO05D003400 1.1e-23 113.2 140 44.3
CiPaw.06G012600 Carya illinoinensis HOM05D003041 ORTHO05D003400 1.5e-23 112.8 140 42.1
SalBow8G4352 Salvia bowleyana HOM05D003041 ORTHO05D003400 1.5e-23 112.8 140 46.4
Solyc05g008290.4 Solanum lycopersicum HOM05D003041 ORTHO05D003400 1.5e-23 112.8 140 46.4
TWI31G0694 Tripterygium wilfordii HOM05D003041 ORTHO05D003400 1.5e-23 112.8 140 45.0
MD13G1026500 Malus domestica HOM05D003041 ORTHO05D003400 1.9e-23 112.5 140 43.6
Cc11_g08850 Coffea canephora HOM05D003041 ORTHO05D003400 2.5e-23 112.1 143 44.8
FAN07G1313 Fragaria x ananassa HOM05D003041 ORTHO05D003400 2.5e-23 112.1 140 48.6
vmacro10636 Vaccinium macrocarpon HOM05D003041 ORTHO05D003400 2.5e-23 112.1 140 44.3
MSTRG.891 Avicennia marina HOM05D003041 ORTHO05D003400 3.3e-23 111.7 140 42.9
BcaB07g32299 Brassica carinata HOM05D003041 ORTHO05D003400 3.3e-23 111.7 142 43.0
Cpa.g.sc65.123 Carica papaya HOM05D003041 ORTHO05D003400 4.3e-23 111.3 140 46.4
Sopen05g004120 Solanum pennellii HOM05D003041 ORTHO05D003400 4.3e-23 111.3 140 45.7
THA.LOC104823018 Tarenaya hassleriana HOM05D003041 ORTHO05D003400 4.3e-23 111.3 140 45.7
TAR622G0413 Trochodendron aralioides HOM05D003041 ORTHO05D003400 4.3e-23 111.3 140 42.1
MSTRG.7628 Avicennia marina HOM05D003041 ORTHO05D003400 9.5e-23 110.2 140 45.7
BcaC05g26213 Brassica carinata HOM05D003041 ORTHO05D003400 9.5e-23 110.2 142 41.5
C05p22220 Brassica napus HOM05D003041 ORTHO05D003400 9.5e-23 110.2 142 41.5
BolC5t30923H Brassica oleracea HOM05D003041 ORTHO05D003400 9.5e-23 110.2 142 41.5
CiPaw.05G248400 Carya illinoinensis HOM05D003041 ORTHO05D003400 1.6e-22 109.4 140 45.0
CANSAT01G2422 Cannabis sativa HOM05D003041 ORTHO05D003400 2.1e-22 109.0 140 40.7
vmacro10637 Vaccinium macrocarpon HOM05D003041 ORTHO05D003400 2.1e-22 109.0 140 43.6
MD13G1026600 Malus domestica HOM05D003041 ORTHO05D003400 3.6e-22 108.2 140 43.6
Cfa008595 Carpinus fangiana HOM05D003041 ORTHO05D003400 6.2e-22 107.5 141 41.8
Ciclev10025245m.g Citrus clementina HOM05D003041 ORTHO05D003400 8.0e-22 107.1 140 44.3
CARHR023390 Cardamine hirsuta HOM05D003041 ORTHO05D003400 1.8e-21 105.9 142 40.8
Thhalv10007182m.g Eutrema salsugineum HOM05D003041 ORTHO05D003400 1.8e-21 105.9 142 43.0
CiPaw.05G248500 Carya illinoinensis HOM05D003041 ORTHO05D003400 2.3e-21 105.5 140 43.6
DCAR_023612 Daucus carota HOM05D003041 ORTHO05D003400 2.3e-21 105.5 140 44.3
Lj6P748T31 Lonicera japonica HOM05D003041 ORTHO05D003400 4.0e-21 104.8 140 41.4
MBI16_g05921_MAGBIO Magnolia biondii HOM05D003041 ORTHO05D003400 4.0e-21 104.8 140 42.1
A09p41710 Brassica napus HOM05D003041 ORTHO05D003400 1.2e-20 103.2 142 40.1
BraA09t39660Z Brassica rapa HOM05D003041 ORTHO05D003400 1.2e-20 103.2 142 40.1
Sp1g20470 Schrenkiella parvula HOM05D003041 ORTHO05D003400 1.2e-20 103.2 142 41.5
AT1G23010 Arabidopsis thaliana HOM05D003041 ORTHO05D003400 1.5e-20 102.8 142 42.3
Nn3g18197 Nelumbo nucifera HOM05D003041 ORTHO05D003400 1.5e-20 102.8 142 41.5
Aa31LG4G10010 Aethionema arabicum HOM05D003041 ORTHO05D003400 2.0e-20 102.4 142 41.5
arahy.Tifrunner.gnm1.ann1.YRV6S7 Arachis hypogaea HOM05D003041 ORTHO05D003400 2.6e-20 102.1 140 41.4
Carub.0001s2251 Capsella rubella HOM05D003041 ORTHO05D003400 2.6e-20 102.1 142 42.3
Prupe.1G323200 Prunus persica HOM05D003041 ORTHO05D003400 2.6e-20 102.1 140 41.4
Glyma.20G126500 Glycine max HOM05D003041 ORTHO05D003400 4.4e-20 101.3 141 42.6
arahy.Tifrunner.gnm1.ann1.TA5AS1 Arachis hypogaea HOM05D003041 ORTHO05D003400 5.8e-20 100.9 140 41.4
AL2G30610 Arabidopsis lyrata HOM05D003041 ORTHO05D003400 1.3e-19 99.8 140 41.4
Carub.0002s1785 Capsella rubella HOM05D003041 ORTHO05D003400 1.3e-19 99.8 140 41.4
Lalb_Chr21g0308461 Lupinus albus HOM05D003041 ORTHO05D003400 1.3e-19 99.8 140 41.4
AT1G71040 Arabidopsis thaliana HOM05D003041 ORTHO05D003400 1.7e-19 99.4 140 42.1
Glyma.10G263800 Glycine max HOM05D003041 ORTHO05D003400 1.7e-19 99.4 89 58.4
Cpa.g.sc211.3 Carica papaya HOM05D003041 ORTHO05D003400 2.2e-19 99.0 140 41.4
PSO017G6219 Papaver somniferum HOM05D003041 ORTHO05D003400 2.2e-19 99.0 140 42.9
PGR119G1292 Punica granatum HOM05D003041 ORTHO05D003400 2.2e-19 99.0 140 40.0
Aqoxy7G02484 Aquilegia oxysepala HOM05D003041 ORTHO05D003400 2.9e-19 98.6 140 40.7
BraA07t31304Z Brassica rapa HOM05D003041 ORTHO05D003400 2.9e-19 98.6 140 40.7
Thhalv10018329m.g Eutrema salsugineum HOM05D003041 ORTHO05D003400 2.9e-19 98.6 140 41.4
BcaB03g14866 Brassica carinata HOM05D003041 ORTHO05D003400 3.7e-19 98.2 140 40.7
C06p45170 Brassica napus HOM05D003041 ORTHO05D003400 3.7e-19 98.2 140 40.7
DCAR_030214 Daucus carota HOM05D003041 ORTHO05D003400 3.7e-19 98.2 140 40.7
CSS0013684 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 6.4e-19 97.4 126 45.2
BolC6t39573H Brassica oleracea HOM05D003041 ORTHO05D003400 8.3e-19 97.1 140 40.0
ECA246G0006 Erigeron canadensis HOM05D003041 ORTHO05D003400 1.1e-18 96.7 140 38.6
Ah.02g127740 Amaranthus hybridus HOM05D003041 ORTHO05D003400 1.4e-18 96.3 140 37.9
Lalb_Chr02g0145381 Lupinus albus HOM05D003041 ORTHO05D003400 1.4e-18 96.3 140 43.6
SGA_v2.0_scaffold38G15066 Striga asiatica HOM05D003041 ORTHO05D003400 1.4e-18 96.3 141 41.1
A07p37470 Brassica napus HOM05D003041 ORTHO05D003400 1.9e-18 95.9 140 40.0
Lalb_Chr21g0308441 Lupinus albus HOM05D003041 ORTHO05D003400 1.9e-18 95.9 140 41.4
Medtr1g107555 Medicago truncatula HOM05D003041 ORTHO05D003400 1.9e-18 95.9 140 40.7
Lj5g0012593 Lotus japonicus HOM05D003041 ORTHO05D003400 2.4e-18 95.5 70 61.4
TPR.G13860 Trifolium pratense HOM05D003041 ORTHO05D003400 3.2e-18 95.1 140 39.3
AL1G36580 Arabidopsis lyrata HOM05D003041 ORTHO05D003400 4.1e-18 94.7 142 40.1
QL01p001972 Quercus lobata HOM05D003041 ORTHO05D003400 4.1e-18 94.7 140 40.7
Sp5g26210 Schrenkiella parvula HOM05D003041 ORTHO05D003400 4.1e-18 94.7 140 40.0
AUR62041235 Chenopodium quinoa HOM05D003041 ORTHO05D003400 5.4e-18 94.4 140 37.9
PSO478G3228 Papaver somniferum HOM05D003041 ORTHO05D003400 5.4e-18 94.4 141 42.6
PGR119G0930 Punica granatum HOM05D003041 ORTHO05D003400 5.4e-18 94.4 140 38.6
MELO3C005201.2 Cucumis melo HOM05D003041 ORTHO05D003400 7.0e-18 94.0 140 37.9
Psat6g220240 Pisum sativum HOM05D003041 ORTHO05D003400 7.0e-18 94.0 140 38.6
HanXRQChr15g0488641 Helianthus annuus HOM05D003041 ORTHO05D003400 9.2e-18 93.6 140 37.9
Aa31LG7G7020 Aethionema arabicum HOM05D003041 ORTHO05D003400 1.2e-17 93.2 142 38.7
Eucgr.G02197 Eucalyptus grandis HOM05D003041 ORTHO05D003400 2.0e-17 92.4 140 37.1
Eucgr.L02941 Eucalyptus grandis HOM05D003041 ORTHO05D003400 2.0e-17 92.4 140 37.1
Lsat_1_v5_gn_3_54600 Lactuca sativa HOM05D003041 ORTHO05D003400 2.0e-17 92.4 140 38.6
Lj5g0011691 Lotus japonicus HOM05D003041 ORTHO05D003400 2.0e-17 92.4 70 58.6
Nn4g24113 Nelumbo nucifera HOM05D003041 ORTHO05D003400 2.0e-17 92.4 140 40.0
Sed0020640 Sechium edule HOM05D003041 ORTHO05D003400 3.5e-17 91.7 140 38.6
Ca_27464_v3 Cicer arietinum L. HOM05D003041 ORTHO05D003400 4.6e-17 91.3 140 37.9
CARHR064330 Cardamine hirsuta HOM05D003041 ORTHO05D003400 6.0e-17 90.9 140 40.0
AUR62014200 Chenopodium quinoa HOM05D003041 ORTHO05D003400 6.0e-17 90.9 140 37.9
CsaV3_5G017570 Cucumis sativus L. HOM05D003041 ORTHO05D003400 6.0e-17 90.9 140 36.4
Phvul.007G038200 Phaseolus vulgaris HOM05D003041 ORTHO05D003400 7.8e-17 90.5 140 37.1
ClCG01G007120 Citrullus lanatus HOM05D003041 ORTHO05D003400 3.0e-16 88.6 140 37.1
EL10Ac6g14235 Beta vulgaris HOM05D003041 ORTHO05D003400 3.9e-16 88.2 140 35.7
Hund28920 Selenicereus undatus HOM05D003041 ORTHO05D003400 3.9e-16 88.2 72 55.6
Hund28921 Selenicereus undatus HOM05D003041 ORTHO05D003400 3.9e-16 88.2 72 55.6
VMungo0720G1513 Vigna mungo HOM05D003041 ORTHO05D003400 5.0e-16 87.8 140 37.1
Ah.10g035140 Amaranthus hybridus HOM05D003041 ORTHO05D003400 1.5e-15 86.3 140 36.4
SEGI_12055 Sequoiadendron giganteum HOM05D003041 ORTHO05D003400 3.6e-14 81.6 69 56.5
HPP92_021851 Vanilla planifolia HOM05D003041 ORTHO05D003400 8.1e-14 80.5 73 54.8
ATR0686G217 Amborella trichopoda HOM05D003041 ORTHO05D003400 1.1e-13 80.1 72 55.6
HPP92_021474 Vanilla planifolia HOM05D003041 ORTHO05D003400 1.8e-13 79.3 73 54.8
SHI04700 Sapria himalayana HOM05D003041 ORTHO05D003400 2.3e-13 79.0 70 54.3
Os01g0126100 Oryza sativa ssp. japonica HOM05D003041 ORTHO05D003400 9.9e-12 73.6 88 42.0
Os01g0126900 Oryza sativa ssp. japonica HOM05D003041 ORTHO05D003400 1.3e-11 73.2 71 49.3
SEGI_28453 Sequoiadendron giganteum HOM05D003041 ORTHO05D003400 1.7e-11 72.8 68 51.5
SEGI_12072 Sequoiadendron giganteum HOM05D003041 ORTHO05D003400 2.2e-11 72.4 70 45.7
Manes.14G169400 Manihot esculenta HOM05D003041 ORTHO05D003400 2.9e-11 72.0 106 38.7
Nn1g01995 Nelumbo nucifera HOM05D003041 ORTHO05D003400 2.9e-11 72.0 87 41.4
Nn1g01994 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.7e-11 71.6 87 40.2
Zm00001eb125660 Zea mays HOM05D003041 ORTHO05D003400 6.4e-11 70.9 107 35.5
Nn1g01993 Nelumbo nucifera HOM05D003041 ORTHO05D003400 8.3e-11 70.5 71 45.1
TAR622G0259 Trochodendron aralioides HOM05D003041 ORTHO05D003400 1.1e-10 70.1 71 46.5
unitig_26.g8995 Utricularia gibba HOM05D003041 ORTHO05D003400 1.1e-10 70.1 71 45.1
Nn5g28967 Nelumbo nucifera HOM05D003041 ORTHO05D003400 9.2e-10 67.0 71 43.7
Nn1g05235 Nelumbo nucifera HOM05D003041 ORTHO05D003400 1.2e-09 66.6 71 43.7
unitig_26.g9005 Utricularia gibba HOM05D003041 ORTHO05D003400 1.2e-09 66.6 72 43.1
CDE07G1323 Ceratophyllum demersum HOM05D003041 ORTHO05D003400 1.6e-09 66.2 71 39.4
Os01g0127000 Oryza sativa ssp. japonica HOM05D003041 ORTHO05D003400 4.6e-09 64.7 77 40.3
CSS0007148 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 6.0e-09 64.3 71 42.3
CSS0000009 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 7.8e-09 63.9 84 40.5
CSS0008481 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 7.8e-09 63.9 84 40.5
Cc04_g06550 Coffea canephora HOM05D003041 ORTHO05D003400 7.8e-09 63.9 71 42.3
Hma1.2p1_2302F.1_g319290 Hydrangea macrophylla HOM05D003041 ORTHO05D003400 1.0e-08 63.5 82 40.2
Nn3g19285 Nelumbo nucifera HOM05D003041 ORTHO05D003400 1.0e-08 63.5 71 40.8
Eucgr.B00862 Eucalyptus grandis HOM05D003041 ORTHO05D003400 1.3e-08 63.2 69 43.5
Zm00001eb125630 Zea mays HOM05D003041 ORTHO05D003400 1.3e-08 63.2 71 45.1
unitig_26.g9004 Utricularia gibba HOM05D003041 ORTHO05D003400 1.7e-08 62.8 72 44.4
Nn3g18200 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.0e-08 62.0 71 40.8
Nn3g19305 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.0e-08 62.0 71 40.8
Nn3g19283 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.9e-08 61.6 71 39.4
Nn4g24116 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.9e-08 61.6 87 36.8
Eucgr.B00864 Eucalyptus grandis HOM05D003041 ORTHO05D003400 5.1e-08 61.2 71 40.8
Hma1.2p1_2006F.1_g310880 Hydrangea macrophylla HOM05D003041 ORTHO05D003400 8.6e-08 60.5 71 39.4
Os01g0127200 Oryza sativa ssp. japonica HOM05D003041 ORTHO05D003400 8.6e-08 60.5 71 39.4
unitig_26.g9001 Utricularia gibba HOM05D003041 ORTHO05D003400 1.1e-07 60.1 70 42.9
Eucgr.B00861 Eucalyptus grandis HOM05D003041 ORTHO05D003400 1.5e-07 59.7 69 40.6
CDE02G4174 Ceratophyllum demersum HOM05D003041 ORTHO05D003400 1.9e-07 59.3 71 38.0
Nn4g24117 Nelumbo nucifera HOM05D003041 ORTHO05D003400 1.9e-07 59.3 71 42.3
Dinv26503 Davidia involucrata HOM05D003041 ORTHO05D003400 2.5e-07 58.9 71 42.3
Os01g0126200 Oryza sativa ssp. japonica HOM05D003041 ORTHO05D003400 2.5e-07 58.9 75 42.7
unitig_749.g14111 Utricularia gibba HOM05D003041 ORTHO05D003400 4.3e-07 58.2 72 36.1
Nn4g24115 Nelumbo nucifera HOM05D003041 ORTHO05D003400 5.6e-07 57.8 71 43.7
Eucgr.B00863 Eucalyptus grandis HOM05D003041 ORTHO05D003400 1.2e-06 56.6 69 39.1
Nn3g18198 Nelumbo nucifera HOM05D003041 ORTHO05D003400 1.2e-06 56.6 72 41.7
Nn4g24118 Nelumbo nucifera HOM05D003041 ORTHO05D003400 1.2e-06 56.6 96 32.3
Nn3g19308 Nelumbo nucifera HOM05D003041 ORTHO05D003400 8.1e-06 53.9 71 39.4


User provided reference genes

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