Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 6.2e-199 697.2 336 100.0
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.1e-190 668.3 334 96.1
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 3.2e-187 658.3 336 94.0
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.6e-186 656.0 336 94.3
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 5.6e-184 647.5 336 92.6
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 1.6e-183 646.0 336 92.6
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.1e-183 645.6 336 93.8
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 3.6e-183 644.8 336 92.6
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 1.8e-182 642.5 336 92.3
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 1.1e-174 616.7 336 86.6
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 9.9e-173 610.1 323 89.5
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 3.8e-172 608.2 327 86.5
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 8.4e-172 607.1 331 85.5
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.1e-171 606.7 325 88.9
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 1.1e-171 606.7 320 88.4
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 1.4e-171 606.3 336 85.7
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.9e-171 605.9 325 86.5
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 2.4e-171 605.5 331 85.8
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 3.5e-170 601.7 319 86.8
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 6.0e-170 600.9 327 86.5
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 6.0e-170 600.9 327 85.3
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.8e-169 599.4 320 88.8
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.3e-169 599.0 322 86.6
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.3e-169 599.0 319 89.3
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.3e-169 599.0 328 86.6
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.9e-169 598.2 321 87.2
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 3.9e-169 598.2 338 84.3
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.1e-168 596.7 318 88.4
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 1.1e-168 596.7 336 84.2
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.5e-168 596.3 328 84.8
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 1.9e-168 595.9 336 84.8
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 2.1e-167 592.4 340 83.5
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.7e-167 591.7 315 86.3
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 8.1e-167 590.5 326 84.0
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.4e-166 589.7 330 84.8
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.8e-166 589.3 332 83.7
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.8e-166 589.3 333 84.1
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.4e-166 589.0 323 86.4
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.4e-166 589.0 327 85.6
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.1e-166 588.6 321 86.6
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 3.1e-166 588.6 327 85.3
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 5.3e-166 587.8 326 84.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 6.9e-166 587.4 332 83.4
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 6.9e-166 587.4 336 83.3
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 9.0e-166 587.0 320 84.7
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 9.0e-166 587.0 312 87.2
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.2e-165 586.6 323 85.8
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 1.2e-165 586.6 323 86.7
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 2.0e-165 585.9 321 87.2
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 2.0e-165 585.9 321 84.4
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 4.5e-165 584.7 319 86.5
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 5.8e-165 584.3 326 84.7
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 7.6e-165 583.9 327 84.1
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 7.6e-165 583.9 323 85.8
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 7.6e-165 583.9 323 85.8
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 7.6e-165 583.9 321 84.4
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 7.6e-165 583.9 321 84.4
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.3e-164 583.2 327 84.4
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.2e-164 582.4 325 84.0
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 2.2e-164 582.4 326 83.7
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 1.1e-163 580.1 325 82.8
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.1e-163 580.1 321 85.4
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.4e-163 579.7 323 85.1
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.4e-163 579.7 326 82.2
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 7.1e-163 577.4 322 83.2
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 9.3e-163 577.0 315 85.4
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 9.3e-163 577.0 318 84.3
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 3.5e-162 575.1 327 83.2
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 3.5e-162 575.1 314 86.9
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.0e-161 573.5 337 81.6
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.0e-161 573.5 325 84.0
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.0e-161 573.5 330 82.1
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.0e-161 573.5 330 82.1
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 5.1e-161 571.2 315 85.1
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 6.7e-161 570.9 315 86.7
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 8.7e-161 570.5 337 81.0
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 8.7e-161 570.5 337 81.0
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 8.7e-161 570.5 327 80.4
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.1e-160 570.1 315 84.8
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 1.9e-160 569.3 331 81.3
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.9e-160 569.3 326 81.6
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.5e-160 568.9 376 74.5
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 3.3e-160 568.5 310 85.8
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 3.3e-160 568.5 314 84.1
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 5.6e-160 567.8 332 81.3
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 7.4e-160 567.4 327 81.7
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 1.6e-159 566.2 319 83.4
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.8e-159 565.5 337 80.4
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.8e-159 565.5 337 80.4
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 2.8e-159 565.5 331 80.7
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 4.8e-159 564.7 334 80.5
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 6.2e-159 564.3 319 82.8
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 8.2e-159 563.9 317 82.6
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 6.9e-158 560.8 326 81.9
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 9.0e-158 560.5 336 80.1
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 9.0e-158 560.5 317 81.7
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 1.0e-156 557.0 330 80.3
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 1.3e-156 556.6 334 79.3
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 3.8e-156 555.1 334 79.0
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 7.1e-155 550.8 316 82.0
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.6e-154 549.7 316 83.9
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 7.9e-154 547.4 317 79.8
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.5e-152 543.1 323 78.6
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.5e-152 543.1 316 81.0
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 6.3e-151 537.7 275 93.1
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 1.7e-148 529.6 347 73.2
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.2e-147 525.4 319 76.8
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 7.2e-147 524.2 299 80.9
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.0e-145 520.4 315 75.9
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 2.0e-144 516.2 280 85.7
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 5.7e-144 514.6 329 72.9
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 5.3e-142 508.1 298 77.5
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 2.0e-141 506.1 279 84.9
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 4.8e-135 485.0 319 70.2
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 2.7e-130 469.2 313 67.4
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 1.1e-128 463.8 333 70.0
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 2.6e-128 462.6 251 84.5
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.2e-127 459.5 306 68.3
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.2e-127 459.5 312 66.7
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.2e-127 459.5 312 66.7
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.0e-116 424.1 230 87.4
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.5e-115 420.2 307 61.9
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 5.2e-105 385.2 316 58.5
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 2.1e-98 363.2 242 70.2
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 2.0e-96 356.7 215 77.2
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 1.6e-90 337.0 316 51.9
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 5.6e-83 312.0 351 44.4
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 8.4e-71 271.6 360 41.1
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.6e-53 214.2 123 75.6
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 4.5e-32 142.9 82 84.1
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.2e-29 134.8 89 75.3
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-22 110.2 84 69.0
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.6e-19 100.5 68 69.1
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 6.5e-15 85.9 52 76.9
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 1.2e-13 81.6 50 72.0
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 6.7e-12 75.9 41 80.5
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 8.8e-12 75.5 51 72.5
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 2.9e-07 60.5 42 59.5


User provided reference genes

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