Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004768g0030 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.3e-44 181.8 90 100.0
Peaxi162Scf00303g00058 Petunia axillaris HOM05D004108 ORTHO05D004849 3.9e-23 111.3 77 74.0
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.6e-19 98.6 98 57.1
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 7.6e-19 97.1 99 54.5
Peaxi162Scf00020g01711 Petunia axillaris HOM05D004108 ORTHO05D004849 1.2e-16 89.7 82 64.6
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 8.1e-13 77.0 105 48.6
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 4.0e-12 74.7 99 46.5
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 2.0e-11 72.4 99 45.5
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 4.4e-11 71.2 99 45.5
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 4.4e-11 71.2 99 45.5
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 1.3e-10 69.7 105 44.8
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 1.7e-10 69.3 105 45.7
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 2.2e-10 68.9 99 44.4
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.9e-09 65.9 105 42.9
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 5.4e-09 64.3 98 46.9
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 5.4e-09 64.3 98 46.9
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 2.1e-08 62.4 106 41.5
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 2.1e-08 62.4 99 41.4
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 3.5e-08 61.6 105 41.9
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 6.0e-08 60.8 106 40.6
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 6.0e-08 60.8 105 41.0
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 7.8e-08 60.5 108 43.5
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 7.8e-08 60.5 106 41.5
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 1.0e-07 60.1 99 43.4
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 1.0e-07 60.1 101 40.6
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.0e-07 60.1 101 40.6
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.3e-07 59.7 102 42.2
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 1.7e-07 59.3 103 40.8
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 3.0e-07 58.5 108 43.5
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 3.9e-07 58.2 112 39.3
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 8.7e-07 57.0 106 39.6
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 8.7e-07 57.0 102 40.2
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 8.7e-07 57.0 104 39.4
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 1.1e-06 56.6 86 44.2
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 1.1e-06 56.6 100 41.0
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 1.1e-06 56.6 102 36.3
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 1.5e-06 56.2 105 39.0
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 1.9e-06 55.8 107 39.3
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.5e-06 55.5 106 40.6
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 3.3e-06 55.1 99 40.4
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.3e-06 55.1 104 37.5
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 3.3e-06 55.1 108 38.0
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.3e-06 54.7 104 38.5
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 4.3e-06 54.7 97 40.2
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 4.3e-06 54.7 101 36.6
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 4.3e-06 54.7 106 36.8
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 5.6e-06 54.3 103 39.8
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 7.3e-06 53.9 85 43.5
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.6e-06 53.5 84 40.5
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.6e-06 53.5 82 40.2
Hma1.2p1_0203F.1_g086240 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 9.6e-06 53.5 63 54.0
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 9.6e-06 53.5 105 35.2


User provided reference genes

Program Settings