Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 0.0e+00 1157.9 579 100.0
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 0.0e+00 1119.0 584 96.9
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 2.5e-309 1064.7 584 91.8
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 4.3e-301 1037.3 588 86.6
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 2.8e-300 1034.6 584 86.6
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 4.8e-300 1033.9 584 86.6
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 2.2e-297 1025.0 556 89.0
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 3.6e-279 964.5 560 83.0
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 4.8e-276 954.1 583 79.1
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 4.8e-276 954.1 578 80.8
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 3.1e-275 951.4 561 82.0
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.6e-274 949.1 557 82.0
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 1.7e-273 945.7 562 82.2
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 2.2e-273 945.3 575 82.1
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 6.5e-273 943.7 589 80.8
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 6.5e-273 943.7 588 79.6
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 3.2e-272 941.4 583 78.9
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 5.5e-272 940.6 563 80.5
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 3.6e-271 937.9 585 80.7
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 6.1e-271 937.2 561 81.3
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.8e-270 935.6 561 81.1
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 2.0e-269 932.2 584 78.8
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 2.0e-269 932.2 560 80.9
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 3.4e-269 931.4 587 78.7
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 4.4e-269 931.0 585 77.9
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 5.7e-269 930.6 561 79.9
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 9.7e-269 929.9 586 79.2
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 9.7e-269 929.9 555 80.9
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 2.2e-268 928.7 561 79.5
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 8.3e-268 926.8 556 80.6
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.4e-267 926.0 560 80.4
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.8e-267 925.6 556 80.4
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 7.0e-267 923.7 586 77.3
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 7.0e-267 923.7 558 78.9
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 9.1e-267 923.3 591 79.5
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 1.2e-266 922.9 563 79.9
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 1.6e-266 922.5 583 77.9
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.7e-266 921.8 559 80.0
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.5e-266 921.4 560 79.3
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.5e-266 921.4 560 79.3
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 3.5e-266 921.4 560 79.3
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.3e-265 919.5 561 79.3
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 1.7e-265 919.1 558 79.0
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 1.7e-265 919.1 559 79.8
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 2.9e-265 918.3 587 77.5
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 2.9e-265 918.3 560 79.1
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 3.8e-265 917.9 579 78.8
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 1.1e-264 916.4 575 77.9
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 1.5e-264 916.0 562 79.5
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 2.5e-264 915.2 585 79.1
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 3.2e-264 914.8 592 76.5
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.6e-263 912.5 592 76.2
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 3.6e-263 911.4 584 76.9
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 4.7e-263 911.0 561 79.1
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 1.0e-262 909.8 580 76.2
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 1.4e-262 909.4 582 77.3
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.3e-262 908.7 592 75.0
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 6.8e-262 907.1 592 74.8
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.2e-261 906.4 592 74.8
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.2e-261 906.4 554 79.6
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 2.0e-261 905.6 561 78.8
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 2.0e-261 905.6 554 78.7
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 3.4e-261 904.8 578 76.3
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 3.4e-261 904.8 579 76.2
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 3.4e-261 904.8 584 76.2
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 7.5e-261 903.7 579 76.9
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 2.8e-260 901.7 688 66.6
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 2.8e-260 901.7 557 78.3
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.7e-260 901.4 592 74.5
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 3.7e-260 901.4 564 79.1
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 1.1e-259 899.8 563 77.3
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 1.8e-259 899.0 535 82.1
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 3.1e-259 898.3 557 78.5
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.1e-259 897.9 578 76.0
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 5.4e-259 897.5 563 77.1
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 9.1e-259 896.7 562 76.9
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 1.2e-258 896.3 561 77.2
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 1.6e-258 896.0 586 76.1
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 2.0e-258 895.6 557 78.6
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 5.9e-258 894.0 558 78.5
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 5.9e-258 894.0 580 75.0
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 7.7e-258 893.6 559 78.2
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 1.0e-257 893.3 578 76.0
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 1.3e-257 892.9 579 76.0
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.7e-257 892.5 581 75.7
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 5.0e-257 891.0 558 78.5
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 5.0e-257 891.0 559 78.4
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 8.6e-257 890.2 585 75.2
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 5.5e-256 887.5 556 78.1
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 5.5e-256 887.5 579 75.1
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 7.2e-256 887.1 565 77.0
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.2e-255 886.3 559 75.7
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 1.2e-255 886.3 555 78.0
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 1.6e-255 885.9 559 76.2
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 2.1e-255 885.6 559 76.4
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 1.0e-254 883.2 579 74.1
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.0e-254 881.7 558 76.2
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 3.0e-254 881.7 562 75.6
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 3.0e-254 881.7 556 76.8
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 6.8e-254 880.6 557 77.2
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 8.9e-254 880.2 583 73.4
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 2.0e-253 879.0 558 75.6
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 2.0e-253 879.0 555 76.6
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 2.6e-253 878.6 555 76.4
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 2.6e-253 878.6 555 76.6
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 2.6e-253 878.6 552 78.4
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 3.4e-253 878.2 558 75.8
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 5.7e-253 877.5 558 75.6
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 9.8e-253 876.7 599 74.5
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 9.8e-253 876.7 555 76.4
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 2.2e-252 875.5 584 75.0
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 3.7e-252 874.8 560 75.2
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 4.9e-252 874.4 510 82.5
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 6.3e-252 874.0 597 73.5
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 8.3e-252 873.6 579 77.4
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 1.4e-251 872.8 557 75.2
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 1.8e-251 872.5 555 75.3
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 1.8e-251 872.5 555 75.3
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.8e-238 829.3 556 73.9
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.7e-236 822.8 503 79.5
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 2.9e-236 822.0 553 70.3
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 2.9e-236 822.0 911 51.4
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 2.3e-233 812.4 587 67.1
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 3.1e-230 802.0 480 81.2
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.0e-225 785.4 872 50.7
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 3.5e-210 735.3 567 63.8
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 6.4e-204 714.5 545 68.4
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 1.4e-203 713.4 381 89.5
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 1.6e-202 709.9 561 65.1
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 5.1e-201 704.9 555 64.9
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 2.0e-189 666.4 566 57.6
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.3e-185 652.9 459 70.2
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 2.9e-172 609.4 323 89.8
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 8.5e-164 581.3 423 70.9
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 1.3e-159 567.4 407 71.0
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 1.4e-153 547.4 574 50.3
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 6.8e-145 518.5 290 86.9
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.4e-134 484.2 428 62.9
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 2.7e-117 426.8 331 60.7
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 9.3e-102 375.2 390 47.4
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.6e-101 374.4 468 42.7
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 9.0e-97 358.6 523 38.0
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 4.8e-90 336.3 187 87.2
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 3.2e-86 323.6 223 69.1
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.7e-79 301.2 231 67.1
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.7e-76 288.9 248 64.1
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.7e-76 288.9 248 64.1
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 2.5e-75 287.3 579 34.0
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.8e-74 283.9 223 65.0
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 4.2e-70 270.0 162 80.2
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.0e-63 248.8 370 35.4
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.3e-63 248.4 170 70.6
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 2.4e-49 201.1 231 50.6
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.2e-42 177.9 93 89.2
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 6.5e-31 139.8 72 91.7
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 2.8e-26 124.4 157 47.1
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 3.7e-26 124.0 153 47.7
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 1.1e-25 122.5 117 56.4
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.9e-18 97.1 88 59.1
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 8.6e-15 86.3 49 75.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 8.6e-15 86.3 49 75.5
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 8.6e-15 86.3 42 88.1
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 2.3e-12 78.2 43 79.1
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 5.2e-12 77.0 48 66.7
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 8.3e-10 69.7 53 62.3


User provided reference genes

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