Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.5e-161 572.8 294 100.0
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.8e-152 541.6 295 93.9
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.4e-141 506.5 294 88.4
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 4.2e-135 485.0 294 87.1
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 3.6e-134 481.9 294 84.7
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 4.8e-131 471.5 294 85.4
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.1e-130 470.3 294 85.0
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 4.4e-116 421.8 295 75.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 2.9e-112 409.1 245 84.1
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 7.2e-111 404.4 295 72.2
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.6e-110 403.3 295 72.2
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 2.1e-110 402.9 296 70.9
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.0e-109 400.6 235 83.8
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.4e-109 400.2 235 82.6
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.4e-109 400.2 270 76.7
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.8e-109 399.8 232 85.3
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 3.0e-109 399.1 262 79.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 4.0e-109 398.7 255 80.8
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 4.0e-109 398.7 295 72.5
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 6.8e-109 397.9 296 72.6
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 8.8e-109 397.5 237 82.7
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.2e-108 397.1 235 83.0
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.6e-108 396.0 266 77.8
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.6e-108 396.0 266 76.7
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.6e-108 396.0 235 82.6
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 2.6e-108 396.0 310 70.0
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 4.4e-108 395.2 266 77.4
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 7.5e-108 394.4 262 78.2
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 9.8e-108 394.0 234 83.8
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.7e-107 393.3 246 80.5
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 3.7e-107 392.1 235 82.6
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 3.7e-107 392.1 232 82.8
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.4e-106 390.2 234 80.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.4e-106 390.2 235 82.6
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 3.1e-106 389.0 258 76.4
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 7.0e-106 387.9 295 70.2
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 9.2e-106 387.5 295 68.8
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 9.2e-106 387.5 235 80.9
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.6e-105 386.7 294 71.1
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.0e-105 386.3 266 75.2
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.5e-105 385.6 278 72.7
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 5.9e-105 384.8 301 68.8
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.3e-104 383.6 294 69.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 1.7e-104 383.3 265 75.8
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.7e-104 383.3 234 79.9
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 2.3e-104 382.9 234 80.3
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.1e-103 380.6 292 68.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.1e-103 380.6 292 68.8
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.1e-103 380.6 296 68.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.5e-103 380.2 244 77.0
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.3e-103 379.0 250 77.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 3.3e-103 379.0 257 75.1
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 4.3e-103 378.6 230 83.0
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 4.3e-103 378.6 231 81.0
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 5.6e-103 378.3 332 64.2
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 5.6e-103 378.3 255 75.3
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 9.5e-103 377.5 209 87.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.2e-102 377.1 232 79.7
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.6e-102 376.7 237 78.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.6e-102 376.7 298 65.1
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.1e-102 376.3 237 78.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 2.1e-102 376.3 295 68.1
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.1e-102 376.3 294 67.3
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 2.8e-102 375.9 273 72.9
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 3.6e-102 375.6 232 79.3
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 6.1e-102 374.8 279 72.0
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 8.0e-102 374.4 247 76.5
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 8.0e-102 374.4 272 72.8
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 8.0e-102 374.4 351 62.1
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.0e-101 374.0 232 80.6
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.0e-101 374.0 234 80.3
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.0e-101 374.0 232 81.0
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 4.0e-101 372.1 264 73.5
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.2e-100 370.5 295 67.5
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.2e-100 370.5 295 67.5
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.5e-100 370.2 277 70.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.5e-100 370.2 293 66.9
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.0e-100 369.8 293 65.5
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.6e-100 369.4 263 73.8
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 2.6e-100 369.4 267 71.5
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.1e-98 364.0 270 68.5
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.8e-98 363.2 283 67.8
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 7.0e-98 361.3 314 63.1
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.0e-98 361.3 285 67.4
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 7.0e-98 361.3 243 75.3
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.2e-98 360.9 272 69.9
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.2e-97 360.5 270 70.0
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 1.6e-97 360.1 286 67.1
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.0e-97 359.8 285 67.0
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.7e-96 356.7 249 71.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 3.9e-96 355.5 249 72.7
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 6.6e-96 354.8 303 63.0
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.5e-95 353.6 249 71.1
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 5.6e-95 351.7 242 70.7
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.0e-93 347.4 272 67.6
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.4e-93 347.1 212 81.6
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 6.6e-88 328.2 305 62.0
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 3.3e-87 325.9 230 70.4
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.2e-86 321.6 230 76.5
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 8.1e-86 321.2 251 64.5
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.0e-80 302.8 220 72.3
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 5.1e-80 302.0 233 67.4
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.9e-75 286.2 240 58.8
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 2.3e-72 276.6 243 57.6
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 6.6e-72 275.0 202 63.4
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 4.0e-69 265.8 224 62.9
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.9e-67 258.8 199 69.3
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.3e-62 244.2 216 57.4
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.5e-44 182.6 269 43.9
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 9.0e-37 158.3 177 52.5
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-33 147.9 95 78.9
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.0e-32 144.8 192 41.7
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 4.8e-30 136.0 94 74.5
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.4e-29 134.4 258 35.3
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 5.9e-28 129.0 93 73.1
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.7e-27 127.5 155 40.6
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 2.6e-23 113.6 131 44.3
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.6e-09 66.6 47 70.2
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.8e-08 64.3 180 31.7


User provided reference genes

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