Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 0.0e+00 1254.2 631 100.0
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 0.0e+00 1160.6 644 91.8
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 3.0e-311 1071.2 631 86.4
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.4e-297 1025.8 633 82.8
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.0e-227 792.7 642 63.2
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.0e-219 766.1 636 63.1
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.3e-218 763.5 631 67.4
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.0e-215 752.3 642 62.6
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.3e-213 746.9 655 60.6
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.8e-208 729.2 645 61.1
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.2e-206 723.8 637 60.3
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 3.4e-206 722.2 644 59.5
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 3.4e-206 722.2 632 60.0
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 2.8e-205 719.2 646 58.0
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.1e-204 717.2 563 63.2
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 2.4e-204 716.1 642 58.1
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.0e-203 713.0 657 59.4
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 4.5e-203 711.8 638 59.2
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 7.8e-203 711.1 643 58.0
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 1.7e-202 709.9 636 58.3
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.9e-201 706.4 641 59.1
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 9.5e-201 704.1 624 60.6
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.8e-200 702.6 653 59.7
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 8.9e-199 697.6 636 58.5
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.0e-198 696.4 646 58.7
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.3e-197 693.7 681 55.8
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.4e-196 690.3 642 57.8
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.0e-195 686.4 644 56.1
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.0e-195 686.4 643 56.1
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.0e-194 684.1 640 55.6
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.7e-194 683.3 634 59.0
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 2.3e-194 682.9 641 55.2
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 3.0e-194 682.6 637 56.0
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.1e-193 680.6 637 57.5
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.9e-193 679.9 631 57.1
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 2.5e-193 679.5 645 56.0
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 9.5e-193 677.6 636 56.4
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.8e-192 676.0 631 56.9
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 8.9e-191 671.0 606 58.7
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 3.4e-190 669.1 631 56.9
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.7e-189 666.8 655 56.5
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 8.3e-189 664.5 626 56.9
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 1.9e-188 663.3 644 55.3
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.1e-187 659.8 655 55.4
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.7e-187 659.4 652 54.0
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 6.0e-187 658.3 624 55.8
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.3e-186 657.1 637 56.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.3e-186 656.4 629 56.3
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 3.0e-186 656.0 452 69.0
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 3.0e-186 656.0 660 54.2
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 5.1e-186 655.2 469 65.9
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 5.1e-186 655.2 632 54.7
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.5e-185 653.7 647 54.4
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 1.9e-185 653.3 636 53.6
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.6e-185 651.7 639 54.8
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 9.5e-185 651.0 636 54.6
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 3.6e-184 649.0 672 53.4
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 3.6e-184 649.0 650 54.6
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 6.2e-184 648.3 637 55.9
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 6.2e-184 648.3 645 55.8
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 8.1e-184 647.9 672 53.3
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 2.3e-183 646.4 637 55.7
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.2e-182 644.0 628 54.9
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.0e-182 643.3 635 52.3
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 3.4e-182 642.5 632 55.1
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 5.8e-182 641.7 637 55.4
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 2.2e-181 639.8 475 61.9
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.4e-180 637.1 642 53.9
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 3.2e-180 636.0 638 53.6
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 5.4e-180 635.2 641 54.8
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-180 634.8 635 52.0
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.2e-180 634.4 479 61.2
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.2e-180 634.4 479 61.2
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.6e-179 633.6 635 51.8
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 7.8e-179 631.3 625 54.7
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-177 627.5 644 52.3
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.9e-177 626.7 635 54.5
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.9e-177 626.7 640 52.7
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 9.5e-177 624.4 632 54.7
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 9.5e-177 624.4 632 54.7
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 3.6e-176 622.5 647 54.1
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.4e-175 619.8 641 54.0
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 8.9e-175 617.8 640 51.6
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-174 617.1 642 51.9
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.4e-172 609.8 528 56.2
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 3.2e-172 609.4 638 52.2
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.0e-170 604.4 649 51.3
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 2.3e-170 603.2 645 51.5
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 6.6e-170 601.7 631 52.9
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.8e-168 596.3 637 50.9
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 8.1e-168 594.7 541 57.1
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-164 584.3 513 55.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.9e-164 583.6 642 49.8
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.2e-164 582.4 454 59.5
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.3e-162 577.4 640 50.8
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 3.9e-162 575.9 651 47.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 5.6e-161 572.0 646 48.9
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 9.6e-161 571.2 654 47.7
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.3e-138 497.7 347 68.0
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 5.3e-135 485.7 642 43.8
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.4e-130 471.1 459 50.5
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 2.2e-128 463.8 456 52.0
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 2.8e-128 463.4 350 62.9
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 7.9e-123 445.3 483 45.3
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 6.7e-122 442.2 600 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 3.6e-115 419.9 585 41.2
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.4e-111 407.9 540 41.1
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.7e-88 331.3 633 39.0
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 2.9e-85 320.5 685 30.5
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.4e-79 301.6 521 34.4
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.7e-62 244.2 546 30.6
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 1.9e-52 211.5 507 28.8
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 6.9e-26 123.2 98 57.1
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 6.9e-26 123.2 98 57.1
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 3.8e-24 117.5 98 55.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.4e-18 99.0 422 23.2


User provided reference genes

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