Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 1.3e-73 279.6 142 100.0
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 1.4e-48 196.4 107 91.6
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 2.3e-46 189.1 107 87.9
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 5.1e-46 188.0 139 73.4
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 2.5e-40 169.1 93 90.3
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 3.1e-35 152.1 107 70.1
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 7.7e-34 147.5 107 67.3
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 2.2e-33 146.0 106 68.9
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 3.8e-33 145.2 107 67.3
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 6.5e-33 144.4 107 67.3
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 6.5e-33 144.4 107 67.3
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 1.1e-32 143.7 107 65.4
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 1.5e-32 143.3 117 62.4
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 1.9e-32 142.9 106 67.9
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 2.5e-32 142.5 107 63.6
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 2.5e-32 142.5 108 68.5
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 3.2e-32 142.1 107 66.4
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 5.5e-32 141.4 104 70.2
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 7.2e-32 141.0 107 67.3
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 7.2e-32 141.0 106 65.1
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 7.2e-32 141.0 106 65.1
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 7.2e-32 141.0 106 65.1
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 7.2e-32 141.0 101 63.4
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 7.2e-32 141.0 89 75.3
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 7.2e-32 141.0 107 68.2
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 9.4e-32 140.6 105 66.7
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 9.4e-32 140.6 105 65.7
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 9.4e-32 140.6 105 65.7
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 9.4e-32 140.6 106 65.1
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 9.4e-32 140.6 103 67.0
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 1.2e-31 140.2 114 65.8
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 2.1e-31 139.4 100 68.0
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 2.7e-31 139.0 107 63.6
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 2.7e-31 139.0 100 67.0
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 3.6e-31 138.7 107 64.5
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 3.6e-31 138.7 107 65.4
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 3.6e-31 138.7 107 65.4
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 3.6e-31 138.7 106 65.1
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 4.7e-31 138.3 106 67.9
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 8.0e-31 137.5 120 62.5
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 8.0e-31 137.5 107 63.6
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 1.0e-30 137.1 91 68.1
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.0e-30 137.1 100 66.0
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 1.8e-30 136.3 117 62.4
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 1.8e-30 136.3 102 64.7
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.3e-30 136.0 106 66.0
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 2.3e-30 136.0 102 63.7
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 2.3e-30 136.0 107 61.7
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 3.0e-30 135.6 107 65.4
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 4.0e-30 135.2 105 67.6
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 5.2e-30 134.8 91 67.0
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 5.2e-30 134.8 107 61.7
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.2e-30 134.8 107 63.6
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 5.2e-30 134.8 106 65.1
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 5.2e-30 134.8 114 62.3
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 6.7e-30 134.4 102 62.7
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 8.8e-30 134.0 106 63.2
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 1.5e-29 133.3 107 60.7
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 1.5e-29 133.3 88 73.9
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 2.0e-29 132.9 107 59.8
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 2.0e-29 132.9 107 60.7
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 2.0e-29 132.9 107 66.4
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 2.0e-29 132.9 108 62.0
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 2.0e-29 132.9 107 63.6
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 2.6e-29 132.5 104 66.3
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 3.3e-29 132.1 107 64.5
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 5.7e-29 131.3 104 65.4
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 5.7e-29 131.3 104 65.4
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 5.7e-29 131.3 104 64.4
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 7.5e-29 131.0 103 66.0
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 9.7e-29 130.6 107 59.8
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 9.7e-29 130.6 105 63.8
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 9.7e-29 130.6 90 65.6
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 9.7e-29 130.6 107 62.6
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 1.3e-28 130.2 90 64.4
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 1.7e-28 129.8 107 61.7
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.7e-28 129.8 129 56.6
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 2.2e-28 129.4 91 64.8
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 2.2e-28 129.4 91 64.8
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 2.2e-28 129.4 99 60.6
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 2.8e-28 129.0 107 59.8
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 2.8e-28 129.0 107 61.7
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 3.7e-28 128.6 90 65.6
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 3.7e-28 128.6 107 59.8
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 8.2e-28 127.5 90 65.6
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 8.2e-28 127.5 100 59.0
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 8.2e-28 127.5 107 57.9
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 1.1e-27 127.1 102 63.7
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 1.1e-27 127.1 90 64.4
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 1.1e-27 127.1 90 64.4
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 1.1e-27 127.1 90 64.4
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 1.1e-27 127.1 93 68.8
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 1.1e-27 127.1 89 67.4
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 1.1e-27 127.1 90 65.6
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 1.4e-27 126.7 74 86.5
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 1.8e-27 126.3 90 64.4
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 1.8e-27 126.3 107 56.1
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 1.8e-27 126.3 102 60.8
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 1.8e-27 126.3 102 60.8
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 1.8e-27 126.3 108 59.3
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 2.4e-27 125.9 95 68.4
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 2.4e-27 125.9 107 61.7
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 4.1e-27 125.2 90 64.4
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 7.0e-27 124.4 108 57.4
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 9.1e-27 124.0 89 64.0
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 9.1e-27 124.0 90 67.8
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 2.0e-26 122.9 90 63.3
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 2.7e-26 122.5 126 54.8
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 2.7e-26 122.5 93 66.7
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 2.2e-25 119.4 88 63.6
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 2.2e-25 119.4 92 59.8
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 2.2e-25 119.4 84 66.7
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 3.8e-25 118.6 105 59.0
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 6.5e-25 117.9 89 66.3
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 8.5e-25 117.5 96 59.4
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 8.5e-25 117.5 105 58.1
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 2.5e-24 115.9 87 58.6
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 4.2e-24 115.2 107 55.1
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 4.2e-24 115.2 104 53.8
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 5.5e-24 114.8 108 50.9
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 7.2e-24 114.4 88 62.5
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 1.2e-23 113.6 107 54.2
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 2.7e-23 112.5 86 59.3
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 3.6e-23 112.1 106 52.8
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 6.1e-23 111.3 107 54.2
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 2.3e-22 109.4 102 52.9
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 4.0e-22 108.6 95 53.7
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 8.8e-22 107.5 108 53.7
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 2.0e-21 106.3 87 65.5
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 3.4e-21 105.5 108 50.0
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 4.4e-21 105.1 108 52.8
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 5.4e-19 98.2 78 67.9
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 1.1e-16 90.5 75 66.7
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 2.5e-16 89.4 59 71.2
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 3.3e-16 89.0 75 62.7
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 1.2e-15 87.0 91 53.8
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 1.2e-15 87.0 86 51.2
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 1.6e-15 86.7 82 53.7
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 8.0e-15 84.3 63 61.9
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 1.4e-14 83.6 80 57.5
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.8e-14 83.2 57 66.7
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 2.6e-13 79.3 62 66.1
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 1.1e-11 73.9 68 58.8
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.2e-10 70.5 70 55.7
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 4.5e-10 68.6 67 49.3
Solyc11g065610.1 Solanum lycopersicum HOM05D005271 ORTHO05D006072 3.8e-09 65.5 40 72.5
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 1.1e-08 63.9 89 46.1


User provided reference genes

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