Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.6e-89 331.6 177 100.0
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.6e-68 263.1 157 88.5
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.7e-51 206.5 157 72.6
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 8.1e-49 197.6 157 68.8
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 7.6e-47 191.0 157 68.2
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 6.4e-46 188.0 161 68.3
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 7.4e-26 121.3 129 54.3
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 1.0e-19 100.9 156 42.9
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 3.0e-19 99.4 127 46.5
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.9e-18 96.7 118 44.9
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 9.6e-18 94.4 163 44.2
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.7e-17 92.4 140 39.3
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 8.2e-17 91.3 116 43.1
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.1e-16 90.9 144 37.5
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.4e-16 90.5 136 38.2
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 4.1e-16 89.0 130 40.8
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.3e-16 88.6 125 40.8
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.5e-15 87.0 125 40.0
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.5e-15 87.0 142 38.7
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.6e-15 86.3 125 39.2
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 2.6e-15 86.3 114 44.7
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.6e-15 86.3 160 37.5
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.5e-15 85.5 117 47.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 5.8e-15 85.1 131 38.9
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 7.6e-15 84.7 131 39.7
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.7e-14 83.6 119 45.4
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.9e-14 82.8 146 35.6
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 2.9e-14 82.8 108 47.2
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 5.0e-14 82.0 136 41.2
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 8.4e-14 81.3 124 41.1
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.1e-13 80.9 131 38.2
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.1e-13 80.9 133 42.1
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 2.5e-13 79.7 120 40.8
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 5.5e-13 78.6 114 43.9
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 7.2e-13 78.2 117 40.2
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 9.3e-13 77.8 123 39.8
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 9.3e-13 77.8 111 43.2
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.1e-12 76.6 130 36.9
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.7e-12 76.3 129 38.0
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.6e-12 75.5 128 40.6
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 6.1e-12 75.1 131 38.2
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 6.1e-12 75.1 122 40.2
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.9e-12 74.7 123 37.4
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.0e-11 74.3 121 37.2
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.0e-11 74.3 109 45.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.3e-11 73.9 119 39.5
Solyc02g069910.2 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.8e-11 73.6 90 52.2
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.8e-11 73.6 121 41.3
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.9e-11 72.4 113 41.6
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 5.1e-11 72.0 116 39.7
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 5.1e-11 72.0 115 40.0
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.1e-10 70.9 159 36.5
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.5e-10 70.5 158 35.4
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.5e-10 70.5 128 37.5
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 2.5e-10 69.7 117 41.9
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.3e-10 69.3 121 38.0
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 4.3e-10 68.9 126 34.1
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 5.7e-10 68.6 97 47.4
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 9.7e-10 67.8 117 36.8
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.2e-09 66.6 135 36.3
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 2.8e-09 66.2 125 40.8
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 3.7e-09 65.9 129 34.9
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 4.8e-09 65.5 126 37.3
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 6.3e-09 65.1 134 35.8
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 6.3e-09 65.1 130 36.9
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.3e-09 65.1 110 41.8
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 8.2e-09 64.7 98 40.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.8e-08 63.5 137 35.8
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.8e-08 63.5 140 32.9
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 2.4e-08 63.2 129 34.9
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 3.1e-08 62.8 118 37.3
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 3.1e-08 62.8 107 34.6
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 4.1e-08 62.4 114 38.6
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 5.3e-08 62.0 128 36.7
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 5.3e-08 62.0 128 36.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 5.3e-08 62.0 128 36.7
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 9.0e-08 61.2 131 30.5
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 9.0e-08 61.2 118 39.0
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.2e-07 60.8 101 39.6
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.5e-07 60.5 128 37.5
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 1.5e-07 60.5 128 34.4
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 1.5e-07 60.5 109 37.6
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 2.6e-07 59.7 130 30.0
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 5.9e-07 58.5 120 38.3
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 7.7e-07 58.2 103 37.9
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 7.7e-07 58.2 118 35.6
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.0e-06 57.8 129 30.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.0e-06 57.8 123 34.1
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 1.3e-06 57.4 144 32.6
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.7e-06 57.0 121 34.7
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.2e-06 56.6 116 33.6
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.2e-06 56.6 129 32.6
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.2e-06 56.6 139 33.8
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.9e-06 56.2 119 33.6
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.9e-06 56.2 127 33.1
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 5.0e-06 55.5 111 33.3
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 8.5e-06 54.7 131 31.3


User provided reference genes

Program Settings