Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 9.3e-156 553.5 284 100.0
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 6.5e-149 530.8 284 95.8
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.4e-122 443.4 284 85.2
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 3.0e-122 442.2 284 85.2
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 5.2e-122 441.4 284 84.9
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 1.5e-116 423.3 283 81.6
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 1.4e-106 390.2 291 72.9
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 2.8e-104 382.5 224 86.6
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 3.1e-103 379.0 287 70.7
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 7.0e-103 377.9 238 82.8
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 7.0e-103 377.9 287 68.6
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 1.6e-102 376.7 222 83.8
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.0e-102 376.3 292 69.9
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 3.5e-102 375.6 232 82.8
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 4.5e-102 375.2 283 70.7
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 1.9e-100 369.8 278 68.7
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.6e-99 366.7 222 85.1
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 2.1e-99 366.3 222 82.9
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.1e-99 366.3 220 82.3
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 6.1e-99 364.8 219 83.6
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 1.0e-98 364.0 282 69.9
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 1.8e-98 363.2 281 69.8
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 2.3e-98 362.8 225 81.8
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 3.0e-98 362.5 281 69.4
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 4.0e-98 362.1 224 79.5
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 4.0e-98 362.1 214 86.4
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 1.2e-97 360.5 285 67.4
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.2e-97 360.5 232 81.0
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 1.5e-97 360.1 235 78.3
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.0e-97 359.8 223 82.1
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 2.0e-97 359.8 223 82.1
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.0e-97 359.8 239 77.8
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.6e-97 359.4 223 81.6
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 3.4e-97 359.0 270 69.6
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 4.4e-97 358.6 250 76.8
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 7.5e-97 357.8 221 79.6
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 7.5e-97 357.8 219 82.2
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 1.3e-96 357.1 221 80.5
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 1.7e-96 356.7 223 80.7
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 2.2e-96 356.3 223 80.3
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 2.2e-96 356.3 263 68.8
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 4.9e-96 355.1 220 79.5
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 6.4e-96 354.8 243 77.8
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 1.4e-95 353.6 223 78.0
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 1.8e-95 353.2 222 78.4
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 3.2e-95 352.4 221 78.3
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 4.1e-95 352.1 223 80.7
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 5.4e-95 351.7 243 77.8
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 7.0e-95 351.3 222 77.9
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 7.0e-95 351.3 222 77.9
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 9.2e-95 350.9 290 64.1
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 1.2e-94 350.5 281 68.3
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.2e-94 350.5 220 80.5
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.2e-94 350.5 245 75.1
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.2e-94 350.5 245 75.1
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 2.0e-94 349.7 281 66.9
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 2.7e-94 349.4 222 77.0
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 4.6e-94 348.6 247 72.1
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 4.6e-94 348.6 220 79.5
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 2.3e-93 346.3 266 69.9
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 2.3e-93 346.3 237 73.4
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 2.3e-93 346.3 215 80.9
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 6.6e-93 344.7 279 65.9
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 1.1e-92 344.0 222 78.4
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 2.5e-92 342.8 221 77.8
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 2.5e-92 342.8 216 81.5
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 3.3e-92 342.4 266 67.7
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 7.3e-92 341.3 201 85.1
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 1.2e-91 340.5 221 77.8
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 1.6e-91 340.1 216 79.6
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.6e-91 340.1 216 79.6
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 2.1e-91 339.7 218 78.4
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 1.0e-90 337.4 218 80.7
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.4e-90 337.0 280 65.4
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 2.3e-90 336.3 208 81.2
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 3.1e-90 335.9 218 80.3
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.2e-89 334.0 208 79.8
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 1.2e-89 334.0 225 77.3
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 2.9e-88 329.3 199 82.9
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 6.4e-88 328.2 205 78.5
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 1.2e-86 323.9 247 70.4
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 2.7e-86 322.8 215 73.0
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 3.9e-85 318.9 184 82.6
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 5.0e-85 318.5 213 75.6
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 8.6e-85 317.8 184 82.1
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 4.3e-84 315.5 184 84.2
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 8.1e-83 311.2 208 76.9
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 2.3e-82 309.7 192 81.8
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 8.9e-82 307.8 189 82.5
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 3.4e-81 305.8 313 56.9
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 7.5e-81 304.7 223 68.6
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 1.3e-80 303.9 191 80.1
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 2.7e-78 296.2 226 70.4
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 2.7e-78 296.2 215 70.7
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 7.8e-78 294.7 223 68.2
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 8.6e-77 291.2 263 60.1
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 1.9e-76 290.0 228 66.7
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 2.8e-75 286.2 220 68.6
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 6.8e-74 281.6 230 68.7
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 8.9e-74 281.2 218 68.8
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 1.2e-73 280.8 286 58.0
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 5.8e-73 278.5 165 84.8
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 3.7e-72 275.8 192 70.8
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 8.1e-67 258.1 193 64.2
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 9.3e-63 244.6 247 56.3
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 3.3e-60 236.1 217 59.4
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 1.6e-59 233.8 202 65.3
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 2.4e-50 203.4 141 75.9
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 3.8e-48 196.1 259 48.3
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 3.8e-48 196.1 181 63.5
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 8.7e-45 184.9 222 47.3
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 8.1e-43 178.3 208 48.1
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.4e-42 177.6 121 75.2
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 6.9e-42 175.3 217 43.8
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 3.2e-39 166.4 97 81.4
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 2.1e-38 163.7 97 80.4
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 5.1e-37 159.1 313 38.0
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 2.4e-34 150.2 174 50.0
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 1.3e-32 144.4 78 87.2
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 3.8e-32 142.9 221 43.4
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 8.5e-32 141.7 80 83.8
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 1.2e-30 137.9 96 72.9
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 3.9e-29 132.9 78 82.1
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.7e-19 100.9 153 47.7
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 1.4e-18 97.8 79 65.8
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 4.5e-17 92.8 66 71.2
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 1.9e-15 87.4 58 75.9
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 9.4e-15 85.1 50 78.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 1.2e-14 84.7 51 76.5
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 3.0e-13 80.1 48 79.2
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 3.0e-13 80.1 55 70.9
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 3.3e-12 76.6 47 72.3
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 2.0e-09 67.4 55 65.5
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 1.0e-08 65.1 47 68.1
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 8.0e-06 55.5 34 70.6


User provided reference genes

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