Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.0e-172 609.0 304 100.0
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 7.9e-161 570.5 343 86.0
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.7e-131 473.0 341 75.1
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 4.5e-124 448.4 341 70.4
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.9e-123 445.7 347 69.5
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 6.5e-123 444.5 348 69.8
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.4e-117 426.0 264 82.2
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.6e-113 412.1 343 63.8
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 4.7e-113 411.8 335 63.6
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.0e-111 406.4 337 64.7
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.3e-110 403.7 337 64.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.7e-110 403.3 337 63.2
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.7e-110 403.3 337 64.1
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.4e-109 400.2 229 84.3
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.4e-109 399.4 229 83.8
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.1e-109 399.1 336 62.8
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.1e-109 398.7 229 83.8
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.2e-108 397.1 230 83.0
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.6e-108 396.7 333 62.2
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.6e-108 396.7 318 65.7
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.7e-108 396.0 337 62.0
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 5.9e-108 394.8 329 61.7
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 7.7e-108 394.4 230 81.7
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.0e-107 394.0 230 81.3
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 5.0e-107 391.7 336 62.5
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.0e-107 391.7 230 81.7
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 5.0e-107 391.7 339 61.9
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.5e-106 389.4 230 80.0
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 3.3e-106 389.0 336 60.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 5.5e-106 388.3 338 61.8
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.5e-106 388.3 336 61.6
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 7.2e-106 387.9 229 80.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 7.2e-106 387.9 230 78.3
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.6e-105 386.7 230 80.4
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.6e-105 386.7 230 80.4
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.1e-105 386.3 243 75.7
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 2.1e-105 386.3 332 61.4
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.1e-105 386.3 233 79.0
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 6.1e-105 384.8 242 77.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 6.1e-105 384.8 229 79.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.8e-104 383.3 229 80.3
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.3e-104 382.9 322 61.5
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 3.0e-104 382.5 243 76.5
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 4.0e-104 382.1 234 76.1
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 6.8e-104 381.3 230 79.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.2e-103 380.6 229 79.5
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.5e-103 380.2 353 59.5
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.5e-103 380.2 229 79.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.5e-103 380.2 336 59.2
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.4e-103 378.6 229 79.9
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 5.7e-103 378.3 243 75.7
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 9.8e-103 377.5 230 79.1
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 9.8e-103 377.5 229 79.0
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.4e-101 373.6 362 56.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.8e-101 373.2 229 77.3
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.8e-101 373.2 229 76.4
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.1e-101 372.1 342 58.5
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 4.1e-101 372.1 230 75.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 7.0e-101 371.3 312 62.2
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.6e-100 370.2 229 76.9
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 2.0e-100 369.8 229 77.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.0e-100 369.8 350 57.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.7e-100 369.4 387 54.5
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 4.5e-100 368.6 231 75.8
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 7.8e-100 367.9 230 76.5
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.0e-99 367.5 314 62.4
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.3e-99 367.1 229 75.5
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.9e-99 365.9 384 53.9
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 5.6e-98 361.7 230 75.7
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.3e-98 361.3 343 57.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.1e-97 359.8 309 60.8
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 8.0e-97 357.8 229 74.7
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 8.0e-97 357.8 232 75.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.8e-96 356.7 308 63.0
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 3.1e-96 355.9 229 73.8
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 6.8e-96 354.8 229 72.9
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.2e-95 354.0 229 72.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.2e-95 354.0 229 72.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.2e-95 354.0 229 72.9
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.5e-95 353.6 229 72.9
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.0e-95 353.2 231 72.7
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 2.0e-95 353.2 228 74.6
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 2.6e-95 352.8 229 72.9
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 2.6e-95 352.8 229 72.1
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 5.8e-95 351.7 229 72.5
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 4.9e-94 348.6 232 70.3
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 8.3e-94 347.8 256 68.8
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.9e-93 346.7 223 76.7
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.0e-92 343.2 229 71.6
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 3.9e-91 339.0 230 70.9
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 8.0e-89 331.3 206 77.7
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 8.9e-88 327.8 347 52.2
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 8.3e-78 294.7 237 62.9
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.5e-74 283.1 233 57.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.1e-73 280.0 244 54.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-72 277.7 208 67.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 6.4e-70 268.5 257 56.0
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.1e-69 267.7 247 58.3
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.2e-68 264.2 234 53.8
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.0e-67 261.2 247 55.9
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.1e-64 249.6 147 79.6
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 5.3e-64 248.8 220 54.1
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.2e-61 239.6 136 79.4
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 7.9e-60 235.0 163 73.0
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.1e-56 224.6 135 80.7
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.1e-56 223.0 134 76.9
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 5.4e-53 212.2 253 50.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 4.8e-49 199.1 115 80.0
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 4.2e-45 186.0 242 42.1
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.6e-44 182.6 134 61.9
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.1e-28 130.6 74 85.1
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.4e-24 117.9 257 30.7
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.8e-24 117.5 227 33.9
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.1e-20 104.0 246 31.7
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.7e-14 84.3 99 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.0e-10 70.9 49 63.3


User provided reference genes

Program Settings