Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.2e-231 804.3 391 100.0
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.8e-203 711.8 391 89.3
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 1.5e-180 636.3 391 80.3
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 2.4e-178 629.0 388 79.4
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 9.4e-175 617.1 388 79.1
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.7e-171 606.3 389 78.9
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 1.1e-167 593.6 398 76.6
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.8e-165 586.3 390 73.1
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.0e-165 585.1 390 73.6
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 9.8e-164 580.5 391 72.9
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.2e-163 579.3 390 72.6
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 2.9e-163 578.9 390 72.6
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 4.3e-151 538.5 357 73.7
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 9.5e-151 537.3 392 66.6
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.6e-150 536.6 391 67.3
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.7e-150 535.0 392 66.3
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 3.4e-148 528.9 392 65.8
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 4.4e-148 528.5 390 66.9
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 5.4e-146 521.5 390 66.7
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 1.7e-144 516.5 390 66.2
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 1.7e-144 516.5 394 65.5
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 1.7e-144 516.5 392 63.5
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 2.3e-144 516.2 390 63.3
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 3.9e-144 515.4 390 66.4
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 5.1e-144 515.0 394 64.2
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 1.1e-143 513.8 389 64.3
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.5e-143 513.5 391 64.7
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 5.6e-143 511.5 393 64.9
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 5.6e-143 511.5 390 63.3
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 1.2e-142 510.4 390 64.9
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.1e-142 509.6 389 64.0
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.4e-141 506.9 390 62.1
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 3.1e-141 505.8 390 62.1
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 3.1e-141 505.8 390 64.1
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.0e-141 505.4 390 64.4
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 1.2e-140 503.8 393 63.6
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 1.2e-140 503.8 394 64.7
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 1.5e-140 503.4 396 64.6
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.6e-140 502.7 390 63.3
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.6e-140 502.7 410 62.2
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 3.4e-140 502.3 389 62.7
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 4.4e-140 501.9 397 63.0
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 5.8e-140 501.5 391 63.7
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.3e-139 500.4 390 63.6
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 6.4e-139 498.0 392 63.0
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.4e-138 496.9 392 63.5
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 1.4e-138 496.9 391 63.7
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 1.9e-138 496.5 390 64.1
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 9.2e-138 494.2 391 63.4
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 9.2e-138 494.2 390 63.6
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 9.2e-138 494.2 390 63.1
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 6.6e-136 488.0 394 62.2
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 1.5e-135 486.9 392 63.0
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 2.5e-135 486.1 419 59.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 4.3e-135 485.3 397 62.2
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 5.6e-135 485.0 411 60.1
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 1.6e-134 483.4 391 62.9
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.8e-133 479.9 392 61.5
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 3.1e-133 479.2 392 61.2
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 4.0e-133 478.8 392 61.7
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 4.0e-133 478.8 403 61.0
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 5.2e-133 478.4 397 62.2
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 1.5e-132 476.9 395 61.3
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 5.8e-132 474.9 390 60.3
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 5.8e-132 474.9 393 61.8
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 7.6e-132 474.6 392 62.0
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.3e-131 473.8 394 60.9
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.7e-131 473.4 400 60.2
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 1.7e-131 473.4 401 60.3
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 1.9e-130 469.9 391 60.6
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 3.2e-130 469.2 390 60.3
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 5.4e-130 468.4 390 60.0
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 9.3e-130 467.6 391 60.4
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 3.5e-129 465.7 390 59.5
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 4.6e-129 465.3 396 60.6
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 6.0e-129 464.9 399 59.9
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.7e-128 463.4 396 60.6
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 2.3e-128 463.0 363 61.2
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 3.0e-128 462.6 390 58.5
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 6.6e-128 461.5 393 60.6
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 6.6e-128 461.5 393 60.8
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 8.7e-128 461.1 390 59.5
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 8.7e-128 461.1 393 61.1
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.1e-127 460.7 392 59.7
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 4.3e-127 458.8 394 61.4
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 2.1e-126 456.4 393 60.6
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 2.1e-126 456.4 393 60.6
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 2.8e-126 456.1 385 59.7
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 2.8e-126 456.1 390 58.5
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 8.1e-126 454.5 386 59.3
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 1.4e-125 453.8 338 64.2
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 1.3e-123 447.2 478 51.3
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 7.1e-122 441.4 428 55.1
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 7.1e-122 441.4 428 55.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 2.7e-121 439.5 414 57.0
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 4.6e-121 438.7 332 63.3
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 5.1e-120 435.3 390 56.2
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 5.1e-120 435.3 392 58.4
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 2.5e-119 433.0 389 57.6
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 1.1e-117 427.6 390 56.2
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.4e-117 427.2 390 57.2
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 4.5e-116 422.2 397 56.9
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 4.9e-115 418.7 389 55.0
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 4.9e-115 418.7 390 55.4
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.2e-114 415.6 395 55.9
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 9.3e-114 414.5 390 55.4
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 3.9e-112 409.1 390 54.6
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 6.7e-112 408.3 396 55.8
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 6.7e-112 408.3 396 55.8
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.1e-111 407.5 245 76.7
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 1.9e-111 406.8 395 54.9
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 4.3e-111 405.6 388 54.4
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 7.4e-111 404.8 388 55.4
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 3.7e-110 402.5 388 54.9
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.4e-109 400.6 358 55.6
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 9.0e-109 397.9 376 54.8
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 1.5e-108 397.1 393 53.7
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.0e-108 396.7 374 55.1
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 7.6e-108 394.8 390 52.6
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 8.4e-107 391.3 362 54.7
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.8e-104 383.6 311 58.5
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 9.6e-103 377.9 322 60.6
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 1.3e-99 367.5 389 51.9
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 3.2e-98 362.8 389 51.2
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 4.2e-98 362.5 389 50.6
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 4.2e-98 362.5 357 52.4
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 4.2e-98 362.5 357 52.4
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 9.3e-98 361.3 357 52.1
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 1.6e-97 360.5 387 51.2
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.3e-96 357.5 354 54.0
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.7e-96 355.1 256 65.2
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.7e-96 355.1 272 59.6
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 1.3e-91 340.9 316 54.7
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.2e-91 340.1 266 61.3
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.6e-89 334.0 339 51.3
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 3.6e-89 332.8 338 52.1
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.0e-88 331.3 227 66.5
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 2.3e-88 330.1 252 65.5
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 2.5e-87 326.6 392 48.2
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 1.2e-84 317.8 380 46.6
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.9e-84 315.5 253 58.9
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 5.5e-82 308.9 267 58.4
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 4.1e-77 292.7 398 41.2
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 1.5e-74 284.3 377 42.2
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 1.6e-73 280.8 409 40.6
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.0e-72 278.1 249 56.2
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.4e-72 277.7 156 79.5
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.7e-70 270.8 404 40.1
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 5.3e-69 265.8 282 50.7
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 2.3e-64 250.4 361 41.3
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 5.0e-59 232.6 191 61.8
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.2e-52 211.5 438 34.7
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 1.2e-39 168.3 367 33.5
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 5.4e-37 159.5 460 29.6
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 6.6e-35 152.5 128 61.7
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 3.6e-33 146.7 118 65.3
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 3.1e-32 143.7 121 66.1
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 4.0e-32 143.3 113 57.5
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.0e-27 128.6 225 34.2
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 1.3e-27 128.3 225 34.2
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.3e-27 127.5 116 56.9
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 6.6e-27 125.9 377 28.6
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 4.4e-23 113.2 168 32.7
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 8.4e-22 109.0 68 66.2
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.2e-17 95.1 89 53.9
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 4.7e-17 93.2 64 71.9
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.4e-15 87.0 70 64.3
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.8e-14 83.6 55 70.9
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 4.9e-14 83.2 104 45.2
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 2.5e-10 70.9 131 35.9
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 2.6e-07 60.8 37 70.3
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.4e-07 60.5 43 65.1


User provided reference genes

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