Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.3e-249 865.9 445 100.0
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 7.8e-234 813.5 460 92.2
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.6e-207 726.1 458 84.1
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.2e-205 719.9 455 83.3
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.1e-195 686.8 416 85.1
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.1e-174 617.1 373 84.5
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.7e-164 583.2 462 66.5
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.7e-162 575.1 414 70.3
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 6.8e-161 571.2 415 70.8
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 8.8e-161 570.9 423 69.0
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 5.7e-160 568.2 454 66.5
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 5.0e-156 555.1 415 68.9
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 4.7e-154 548.5 448 62.7
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 4.7e-154 548.5 448 62.7
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.0e-153 547.4 451 63.4
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 4.0e-153 545.4 437 65.4
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.2e-152 543.9 428 64.7
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 1.5e-152 543.5 425 65.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 5.7e-152 541.6 449 63.0
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.2e-151 539.7 417 67.4
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.1e-150 537.3 439 63.3
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.4e-150 537.0 417 66.9
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 1.2e-149 533.9 424 63.2
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.0e-149 533.1 411 67.6
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 3.5e-149 532.3 451 63.4
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 5.9e-149 531.6 435 64.6
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.3e-148 530.4 468 63.2
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.6e-146 523.5 454 60.8
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 2.1e-146 523.1 410 66.1
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.8e-145 520.0 443 60.9
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 2.0e-144 516.5 404 66.1
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 3.4e-144 515.8 391 67.0
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-143 513.5 409 66.5
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 2.4e-142 509.6 446 59.2
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 9.2e-142 507.7 403 64.5
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.2e-141 507.3 415 64.6
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.0e-140 501.9 428 62.4
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 8.6e-140 501.1 404 62.6
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.1e-139 500.7 411 63.5
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.9e-139 500.0 460 58.5
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.5e-139 499.6 421 62.2
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 5.6e-139 498.4 417 63.1
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 7.3e-139 498.0 422 60.9
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.3e-137 493.0 483 55.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 5.2e-137 491.9 460 56.7
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 6.8e-137 491.5 411 62.5
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 8.9e-137 491.1 463 57.5
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 1.2e-136 490.7 423 61.0
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 2.0e-136 490.0 401 63.3
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 2.6e-136 489.6 400 64.8
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 3.4e-136 489.2 467 57.0
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 5.8e-136 488.4 412 62.6
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 7.5e-136 488.0 452 56.4
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 7.5e-136 488.0 421 60.3
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.3e-135 487.3 426 60.1
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.7e-135 486.9 452 56.4
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.1e-134 484.2 455 56.7
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 1.4e-134 483.8 406 62.6
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.9e-134 483.4 427 58.5
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.2e-134 482.6 454 58.8
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.6e-133 480.3 455 56.3
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.7e-133 479.6 444 58.6
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 2.3e-132 476.5 455 55.6
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 3.0e-132 476.1 444 58.1
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.5e-131 473.0 439 56.7
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 4.3e-131 472.2 376 66.2
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 5.6e-131 471.9 291 87.6
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.6e-130 470.3 407 58.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 2.8e-130 469.5 400 62.2
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 6.2e-130 468.4 466 55.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 6.2e-130 468.4 468 55.3
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.8e-129 466.8 464 55.0
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 4.0e-129 465.7 361 65.7
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 5.2e-129 465.3 438 56.4
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 8.9e-129 464.5 448 55.8
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 2.0e-128 463.4 438 56.2
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 2.4e-126 456.4 410 57.8
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 9.2e-126 454.5 380 63.2
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 2.1e-125 453.4 495 51.7
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.7e-119 433.7 409 56.2
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 2.2e-119 433.3 408 56.6
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.3e-115 419.5 422 55.0
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.8e-113 413.7 331 64.7
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 3.4e-112 409.5 333 63.7
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 9.9e-112 407.9 418 52.9
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 4.8e-106 389.0 354 55.6
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 2.0e-104 383.6 331 62.5
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 6.4e-103 378.6 397 50.1
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 7.4e-99 365.2 266 69.5
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 7.4e-99 365.2 266 69.2
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.4e-97 360.9 329 58.7
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 2.4e-97 360.1 362 53.0
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 9.0e-97 358.2 294 65.0
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 4.5e-96 355.9 554 42.2
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.5e-91 340.9 295 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 7.4e-91 338.6 401 46.4
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.4e-89 334.3 238 70.6
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 3.1e-89 333.2 441 42.2
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.3e-89 332.4 294 58.2
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.4e-86 324.3 407 43.5
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 4.6e-85 319.3 331 52.0
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 2.5e-78 297.0 425 40.0
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.7e-56 222.2 144 75.7
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.7e-55 221.1 290 43.8
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 3.6e-53 213.4 165 63.6
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.1e-46 191.8 147 69.4
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.7e-37 159.8 161 52.2
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 8.0e-37 159.1 109 70.6
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 6.3e-34 149.4 145 53.1
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.3e-31 141.7 96 71.9
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.5e-30 135.6 123 63.4
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.8e-29 134.0 167 47.3
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 8.9e-28 129.0 117 59.0
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 7.5e-27 125.9 104 59.6
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.2e-26 124.4 91 63.7
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.4e-09 67.8 50 66.0
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 3.5e-08 63.9 47 68.1


User provided reference genes

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