Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.9e-209 732.3 373 100.0
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.5e-206 722.6 372 98.7
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.1e-187 659.1 373 90.1
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.7e-187 658.7 373 90.1
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.0e-186 656.8 373 89.8
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 7.4e-185 650.6 375 89.1
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.3e-160 570.1 373 78.0
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.8e-160 568.9 376 77.7
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 6.3e-160 567.8 372 77.4
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 6.3e-160 567.8 372 77.4
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.5e-156 555.8 371 76.5
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 3.3e-153 545.4 374 73.8
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 6.3e-152 541.2 372 73.1
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 8.2e-152 540.8 299 90.3
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.4e-151 540.0 370 73.2
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 2.4e-151 539.3 376 73.1
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.5e-150 536.6 372 73.1
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.0e-150 536.2 311 83.3
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 2.0e-150 536.2 372 72.3
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 4.5e-150 535.0 375 72.5
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 2.2e-149 532.7 374 71.1
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 1.4e-148 530.0 372 72.0
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 1.9e-148 529.6 376 73.1
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 3.2e-148 528.9 377 71.1
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 9.4e-148 527.3 376 72.3
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.2e-147 526.9 371 72.0
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 2.7e-147 525.8 372 70.4
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 4.7e-147 525.0 377 70.8
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.0e-146 523.9 339 75.5
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 1.0e-146 523.9 370 71.1
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.4e-146 523.5 375 70.9
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 3.0e-146 522.3 335 75.5
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.9e-146 521.9 372 70.2
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 3.9e-146 521.9 365 72.6
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 6.7e-146 521.2 364 70.9
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 3.3e-145 518.8 364 70.3
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 7.4e-145 517.7 380 69.7
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 4.8e-144 515.0 372 69.9
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 8.2e-144 514.2 378 70.1
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.8e-143 513.1 374 70.6
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 3.1e-143 512.3 378 71.2
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 7.0e-143 511.1 372 69.6
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 9.1e-143 510.8 420 65.0
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.6e-142 510.0 313 78.6
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.6e-142 510.0 313 78.6
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.6e-142 509.2 381 70.3
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.6e-142 509.2 372 71.0
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 3.5e-142 508.8 374 68.4
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 3.5e-142 508.8 374 68.4
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 2.9e-141 505.8 375 69.9
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 3.8e-141 505.4 342 71.6
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 8.5e-141 504.2 374 69.3
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 8.5e-141 504.2 378 68.5
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 4.2e-140 501.9 374 67.9
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 7.2e-140 501.1 380 67.4
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 9.4e-140 500.7 370 66.5
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 2.1e-139 499.6 372 68.5
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.7e-139 499.2 339 73.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 4.7e-139 498.4 372 67.7
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 1.0e-138 497.3 371 66.8
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 6.7e-138 494.6 371 67.1
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 5.7e-137 491.5 371 66.8
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.7e-136 490.0 380 67.4
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.7e-136 490.0 334 71.6
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 3.7e-136 488.8 346 69.1
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 6.3e-136 488.0 306 77.1
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.8e-135 486.5 310 74.5
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 2.4e-135 486.1 357 69.2
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 7.0e-135 484.6 373 67.6
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.2e-134 483.8 367 67.6
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 2.0e-134 483.0 282 83.3
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.5e-134 482.3 375 65.6
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-133 480.3 361 66.8
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.9e-133 479.2 390 63.6
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 3.8e-133 478.8 345 69.6
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 3.8e-133 478.8 346 68.5
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 3.2e-132 475.7 340 71.2
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.6e-131 473.4 407 61.2
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 2.1e-131 473.0 370 64.6
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 2.1e-131 473.0 370 64.6
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 3.6e-131 472.2 370 64.6
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 6.1e-131 471.5 372 63.7
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 6.8e-130 468.0 327 70.3
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.3e-128 463.8 373 63.0
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.3e-128 463.8 280 81.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.5e-125 451.4 280 77.5
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 1.2e-123 447.2 374 58.8
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.8e-123 446.0 345 65.8
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 1.5e-116 423.7 489 50.9
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 1.4e-106 390.6 245 76.7
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 8.9e-106 387.9 372 55.6
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.7e-101 373.6 271 67.2
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 3.1e-98 362.8 330 55.5
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.1e-95 354.4 206 85.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 2.4e-95 353.2 256 66.8
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 9.2e-95 351.3 233 73.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.5e-94 349.4 372 48.7
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.5e-94 349.4 372 48.7
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 5.2e-90 335.5 275 58.5
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.0e-86 322.0 252 62.3
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.0e-57 227.3 166 62.7
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 9.0e-50 201.8 165 64.8
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.4e-45 188.0 170 57.1
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 6.9e-42 175.6 125 74.4
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 4.2e-39 166.4 169 48.5
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 1.2e-33 148.3 136 55.9
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.1e-28 131.7 150 48.7
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 5.7e-28 129.4 85 77.6
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 7.0e-26 122.5 106 50.0
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.8e-19 100.5 84 61.9
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.1e-18 98.6 133 43.6
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 1.5e-07 61.6 48 64.6
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 1.5e-07 61.6 48 64.6


User provided reference genes

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