Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.0e-237 824.7 395 100.0
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.4e-229 799.3 395 96.7
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 3.6e-190 668.3 397 80.9
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.7e-185 652.1 398 81.2
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.5e-183 645.6 397 79.3
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 9.5e-183 643.7 397 78.8
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 5.2e-181 637.9 395 79.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 3.5e-169 598.6 390 72.8
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 6.0e-169 597.8 396 72.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.9e-167 592.8 400 72.2
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.4e-165 585.9 394 69.8
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 5.2e-165 584.7 404 70.8
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.3e-163 580.1 393 73.0
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 6.6e-160 567.8 389 69.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 8.1e-158 560.8 408 67.2
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.4e-156 555.4 379 70.7
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.9e-155 552.4 403 67.0
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.8e-155 552.0 396 68.2
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 2.4e-154 549.3 401 66.3
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 7.1e-154 547.7 393 67.9
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 7.1e-154 547.7 388 66.8
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 7.1e-154 547.7 404 65.8
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.1e-153 546.2 404 66.3
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 2.7e-153 545.8 399 65.4
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 3.5e-153 545.4 399 68.2
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 4.6e-153 545.0 389 68.6
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.0e-152 542.3 379 69.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 6.7e-152 541.2 396 67.2
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 8.7e-152 540.8 381 68.2
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.9e-151 539.7 397 65.7
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 4.3e-151 538.5 398 65.6
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.6e-150 536.6 406 65.8
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 3.7e-150 535.4 382 66.2
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 3.7e-150 535.4 378 66.7
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 6.2e-150 534.6 383 66.3
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 8.1e-150 534.3 398 65.1
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.4e-149 533.5 366 69.7
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.4e-149 532.7 390 67.2
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 5.3e-149 531.6 376 66.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.5e-148 530.0 373 67.0
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.0e-148 529.6 387 64.9
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 3.4e-148 528.9 406 63.8
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 3.4e-148 528.9 395 63.8
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 4.5e-148 528.5 398 65.6
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.7e-147 526.6 371 67.1
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.7e-147 526.6 387 66.7
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 2.2e-147 526.2 393 63.6
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 8.4e-147 524.2 372 66.7
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.1e-146 523.9 373 67.0
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-146 523.5 387 66.4
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.9e-146 523.1 393 64.4
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 5.5e-146 521.5 400 63.5
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.1e-145 519.6 385 64.4
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.6e-145 518.5 380 65.0
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.6e-145 518.5 380 65.0
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 3.3e-143 512.3 401 62.6
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.3e-143 512.3 405 64.0
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 1.6e-142 510.0 384 65.1
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 4.8e-142 508.4 394 63.7
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 3.4e-140 502.3 386 64.0
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 5.8e-140 501.5 403 63.3
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 7.6e-140 501.1 389 62.5
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.7e-139 500.0 402 61.9
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.9e-139 499.2 395 61.3
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 6.5e-139 498.0 382 63.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 3.2e-138 495.7 401 62.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 5.5e-138 495.0 380 63.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 5.5e-138 495.0 380 63.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 5.5e-138 495.0 380 63.2
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 5.5e-138 495.0 409 60.1
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.2e-137 493.8 401 62.3
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 3.5e-137 492.3 404 61.4
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.0e-136 490.7 384 63.0
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.3e-136 490.3 384 63.0
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 2.3e-136 489.6 385 62.9
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 8.7e-136 487.6 403 60.8
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.1e-135 487.3 390 61.8
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.5e-135 486.9 393 60.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.3e-135 485.7 400 60.8
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 7.4e-135 484.6 399 61.2
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 6.3e-134 481.5 395 60.0
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 3.1e-133 479.2 378 62.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.1e-133 479.2 392 60.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 6.9e-133 478.0 389 61.4
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.0e-131 474.2 395 59.7
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.2e-130 469.2 371 62.0
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 5.5e-130 468.4 398 58.0
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 9.4e-130 467.6 385 60.0
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.6e-129 466.8 393 60.8
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.4e-128 463.8 383 60.3
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-128 463.8 383 60.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.3e-128 463.0 383 59.5
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 8.8e-128 461.1 361 63.2
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-127 460.3 383 60.1
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.2e-126 456.4 409 56.7
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.6e-124 449.5 371 56.3
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.2e-122 442.2 372 58.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.2e-110 403.3 397 52.1
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.5e-107 391.3 406 49.5
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 7.7e-92 341.7 248 67.7
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.8e-88 328.6 379 48.8
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 8.6e-83 311.6 357 45.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.0e-80 304.7 213 69.0
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 5.2e-80 302.4 351 46.7
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 5.8e-79 298.9 234 60.7
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.9e-78 296.6 256 59.0
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 4.6e-68 262.7 402 39.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.2e-63 248.1 403 38.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 2.1e-57 227.3 307 42.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.9e-53 214.2 393 36.6
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.4e-37 161.4 120 67.5
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.9e-34 151.0 422 30.8
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 4.3e-34 149.8 114 64.9
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.9e-29 134.4 179 45.8
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.1e-29 132.5 395 30.1
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.3e-27 128.3 132 52.3
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.8e-27 127.9 422 29.6
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.8e-25 120.6 237 36.3
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-24 117.9 266 33.8
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.1e-20 104.4 53 84.9
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 6.7e-11 72.8 219 27.9
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 4.5e-07 60.1 47 55.3


User provided reference genes

Program Settings