Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 3.7e-43 177.9 98 100.0
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 5.0e-32 141.0 150 63.3
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 6.7e-29 130.6 124 66.9
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 8.8e-29 130.2 124 66.9
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.2e-25 119.8 74 83.8
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.2e-22 109.8 123 58.5
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.4e-21 106.3 79 70.9
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.4e-21 106.3 79 69.6
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.4e-21 106.3 79 69.6
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 8.8e-21 103.6 74 73.0
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 2.6e-20 102.1 74 68.9
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 3.3e-20 101.7 79 67.1
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 5.7e-20 100.9 79 68.4
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.3e-19 99.8 118 50.0
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.7e-19 99.4 79 65.8
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.7e-19 99.4 108 54.6
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 1.7e-19 99.4 79 67.1
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.8e-19 98.6 79 65.8
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 4.8e-19 97.8 79 64.6
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.8e-19 97.8 72 68.1
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.1e-18 96.7 79 65.8
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.4e-18 96.3 79 67.1
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.8e-18 95.9 79 64.6
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.8e-18 95.9 79 63.3
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 3.1e-18 95.1 121 49.6
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 3.1e-18 95.1 79 63.3
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 4.1e-18 94.7 79 63.3
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 7.0e-18 94.0 127 49.6
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.2e-17 93.2 68 72.1
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.2e-17 93.2 71 67.6
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 1.2e-17 93.2 79 62.0
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 1.6e-17 92.8 73 64.4
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 2.0e-17 92.4 74 60.8
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 2.0e-17 92.4 130 47.7
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 2.6e-17 92.0 126 46.8
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 2.6e-17 92.0 83 59.0
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 2.6e-17 92.0 75 61.3
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 2.6e-17 92.0 124 48.4
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 2.6e-17 92.0 73 68.5
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.6e-17 92.0 126 50.8
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 4.5e-17 91.3 79 64.6
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 5.9e-17 90.9 75 62.7
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 5.9e-17 90.9 78 65.4
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.3e-16 89.7 79 59.5
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.7e-16 89.4 75 62.7
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.7e-16 89.4 79 63.3
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 2.2e-16 89.0 69 68.1
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 2.2e-16 89.0 79 60.8
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 2.2e-16 89.0 73 61.6
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.9e-16 88.6 123 45.5
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 2.9e-16 88.6 119 46.2
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 3.8e-16 88.2 79 57.0
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 3.8e-16 88.2 79 57.0
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 3.8e-16 88.2 124 46.8
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 3.8e-16 88.2 123 46.3
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 5.0e-16 87.8 85 56.5
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 6.5e-16 87.4 71 66.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.5e-16 87.4 130 45.4
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 6.5e-16 87.4 123 45.5
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 6.5e-16 87.4 77 61.0
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 6.5e-16 87.4 69 65.2
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.5e-16 87.0 130 45.4
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.1e-15 86.7 79 55.7
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.9e-15 85.9 130 44.6
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.2e-15 85.1 79 57.0
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.2e-15 85.1 74 59.5
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 4.2e-15 84.7 124 43.5
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 4.2e-15 84.7 88 56.8
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 9.4e-15 83.6 96 51.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 9.4e-15 83.6 79 57.0
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.6e-14 82.8 79 55.7
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 2.1e-14 82.4 79 57.0
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 2.1e-14 82.4 114 48.2
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 3.6e-14 81.6 73 61.6
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 8.0e-14 80.5 85 57.6
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 8.0e-14 80.5 68 64.7
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.0e-13 80.1 79 53.2
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 5.2e-13 77.8 79 54.4
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 2.6e-12 75.5 71 59.2
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.3e-11 73.2 79 54.4
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.3e-11 73.2 74 54.1
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 8.3e-11 70.5 74 54.1
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 8.3e-11 70.5 74 54.1
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.1e-10 70.1 77 53.2
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 1.4e-10 69.7 74 54.1
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.8e-10 69.3 74 55.4
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 2.4e-10 68.9 74 54.1
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.1e-10 68.6 74 52.7
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 3.1e-10 68.6 74 54.1
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 3.1e-10 68.6 74 54.1
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 3.1e-10 68.6 74 54.1
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 3.1e-10 68.6 74 54.1
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 3.1e-10 68.6 74 54.1
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 4.1e-10 68.2 52 65.4
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 7.0e-10 67.4 74 52.7
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 7.0e-10 67.4 43 74.4
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.2e-09 66.6 91 46.2
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 4.5e-09 64.7 44 72.7
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 5.9e-09 64.3 58 53.4
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 1.3e-08 63.2 47 68.1
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.2e-08 62.4 53 56.6
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 8.5e-08 60.5 52 55.8
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.1e-07 60.1 41 68.3
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 3.6e-06 55.1 48 58.3
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 8.0e-06 53.9 61 49.2


User provided reference genes

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