Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004654g0060 Nicotiana tabacum HOM05D007583 ORTHO05D009591 2.9e-85 318.5 162 100.0
Nitab4.5_0000021g0070 Nicotiana tabacum HOM05D007583 ORTHO05D009591 8.7e-58 227.3 163 76.7
Peaxi162Scf01447g00015 Petunia axillaris HOM05D007583 ORTHO05D009591 4.5e-54 214.9 162 71.0
CAN.G303.41 Capsicum annuum HOM05D007583 ORTHO05D009591 3.5e-51 205.3 163 69.9
PGSC0003DMG400000557 Solanum tuberosum HOM05D007583 ORTHO05D009591 6.5e-45 184.5 165 66.1
Sopen03g021840 Solanum pennellii HOM05D007583 ORTHO05D009591 1.5e-41 173.3 162 64.2
Thecc.03G210100 Theobroma cacao HOM05D007583 ORTHO05D009591 7.4e-41 171.0 162 59.3
CANSAT21G0363 Cannabis sativa HOM05D007583 ORTHO05D009591 5.3e-39 164.9 168 54.8
Dinv17291 Davidia involucrata HOM05D007583 ORTHO05D009591 6.9e-39 164.5 162 56.2
CiPaw.06G039700 Carya illinoinensis HOM05D007583 ORTHO05D009591 1.5e-38 163.3 164 57.3
Ciclev10023379m.g Citrus clementina HOM05D007583 ORTHO05D009591 2.0e-38 162.9 163 55.8
Actinidia34276 Actinidia chinensis HOM05D007583 ORTHO05D009591 2.6e-38 162.5 162 56.2
COL.COLO4_14383 Corchorus olitorius HOM05D007583 ORTHO05D009591 4.5e-38 161.8 162 56.8
Gohir.D12G246400 Gossypium hirsutum HOM05D007583 ORTHO05D009591 5.9e-38 161.4 162 56.2
CiPaw.05G206200 Carya illinoinensis HOM05D007583 ORTHO05D009591 1.3e-37 160.2 164 56.1
Gohir.A12G245600 Gossypium hirsutum HOM05D007583 ORTHO05D009591 1.7e-37 159.8 162 56.2
Lj1A1029T63 Lonicera japonica HOM05D007583 ORTHO05D009591 1.7e-37 159.8 169 53.8
Haze_00308 Corylus avellana HOM05D007583 ORTHO05D009591 2.9e-37 159.1 162 56.8
Gorai.008G264000 Gossypium raimondii HOM05D007583 ORTHO05D009591 2.9e-37 159.1 162 55.6
Cpa.g.sc3.165 Carica papaya HOM05D007583 ORTHO05D009591 8.5e-37 157.5 162 54.3
Lalb_Chr17g0344861 Lupinus albus HOM05D007583 ORTHO05D009591 8.5e-37 157.5 163 57.1
Glyma.02G222700 Glycine max HOM05D007583 ORTHO05D009591 2.5e-36 156.0 163 57.7
Manes.01G044300 Manihot esculenta HOM05D007583 ORTHO05D009591 7.2e-36 154.5 162 55.6
Oeu017371.1 Olea europaea HOM05D007583 ORTHO05D009591 9.4e-36 154.1 177 52.5
Ah.07g204560 Amaranthus hybridus HOM05D007583 ORTHO05D009591 1.6e-35 153.3 163 54.6
Carub.0007s1327 Capsella rubella HOM05D007583 ORTHO05D009591 1.6e-35 153.3 184 51.6
DCAR_020383 Daucus carota HOM05D007583 ORTHO05D009591 1.6e-35 153.3 180 50.0
MD01G1229600 Malus domestica HOM05D007583 ORTHO05D009591 1.6e-35 153.3 171 52.6
THA.LOC104799940 Tarenaya hassleriana HOM05D007583 ORTHO05D009591 2.1e-35 152.9 162 52.5
A01p18820 Brassica napus HOM05D007583 ORTHO05D009591 2.7e-35 152.5 177 49.7
SGA_v2.0_scaffold18G08478 Striga asiatica HOM05D007583 ORTHO05D009591 2.7e-35 152.5 172 48.3
VMungo0647G0188 Vigna mungo HOM05D007583 ORTHO05D009591 2.7e-35 152.5 163 55.8
Actinidia08707 Actinidia chinensis HOM05D007583 ORTHO05D009591 3.6e-35 152.1 163 56.4
arahy.Tifrunner.gnm1.ann1.WWD45I Arachis hypogaea HOM05D007583 ORTHO05D009591 3.6e-35 152.1 163 55.2
BcaC09g50578 Brassica carinata HOM05D007583 ORTHO05D009591 4.7e-35 151.8 177 49.7
C01p23760 Brassica napus HOM05D007583 ORTHO05D009591 4.7e-35 151.8 177 49.7
Duzib084G1298 Durio zibethinus HOM05D007583 ORTHO05D009591 4.7e-35 151.8 162 53.7
arahy.Tifrunner.gnm1.ann1.371AVF Arachis hypogaea HOM05D007583 ORTHO05D009591 6.1e-35 151.4 163 54.6
BcaNung01657 Brassica carinata HOM05D007583 ORTHO05D009591 7.9e-35 151.0 179 50.3
Phvul.008G189400 Phaseolus vulgaris HOM05D007583 ORTHO05D009591 1.0e-34 150.6 163 55.8
LjContig00155g0018445 Lotus japonicus HOM05D007583 ORTHO05D009591 1.8e-34 149.8 164 56.1
Prupe.2G320200 Prunus persica HOM05D007583 ORTHO05D009591 2.3e-34 149.4 165 56.4
PGR042G3197 Punica granatum HOM05D007583 ORTHO05D009591 3.0e-34 149.1 168 54.2
TPR.G5848 Trifolium pratense HOM05D007583 ORTHO05D009591 3.0e-34 149.1 163 54.6
Dinv29203 Davidia involucrata HOM05D007583 ORTHO05D009591 3.9e-34 148.7 161 52.2
MD07G1301600 Malus domestica HOM05D007583 ORTHO05D009591 3.9e-34 148.7 173 50.9
Solyc03g080110.3 Solanum lycopersicum HOM05D007583 ORTHO05D009591 6.7e-34 147.9 165 55.8
Eucgr.A00968 Eucalyptus grandis HOM05D007583 ORTHO05D009591 8.8e-34 147.5 165 52.1
Sp7g25520 Schrenkiella parvula HOM05D007583 ORTHO05D009591 8.8e-34 147.5 175 50.9
FvH4_7g33050 Fragaria vesca HOM05D007583 ORTHO05D009591 1.5e-33 146.7 174 54.6
QL09p006750 Quercus lobata HOM05D007583 ORTHO05D009591 1.5e-33 146.7 150 55.3
Sc19g0000500 Simmondsia chinensis HOM05D007583 ORTHO05D009591 3.3e-33 145.6 162 50.0
FAN10G3230 Fragaria x ananassa HOM05D007583 ORTHO05D009591 4.4e-33 145.2 174 54.0
FAN03G2810 Fragaria x ananassa HOM05D007583 ORTHO05D009591 7.4e-33 144.4 174 54.6
BraA01t01826Z Brassica rapa HOM05D007583 ORTHO05D009591 9.7e-33 144.1 168 49.4
Psat2g061160 Pisum sativum HOM05D007583 ORTHO05D009591 1.3e-32 143.7 163 53.4
RcHm_v2.0_Chr1g0383061 Rosa chinensis HOM05D007583 ORTHO05D009591 1.3e-32 143.7 173 53.8
Aqoxy5G04366 Aquilegia oxysepala HOM05D007583 ORTHO05D009591 1.7e-32 143.3 161 50.9
BolC1t02327H Brassica oleracea HOM05D007583 ORTHO05D009591 1.7e-32 143.3 168 49.4
AL7G25160 Arabidopsis lyrata HOM05D007583 ORTHO05D009591 2.8e-32 142.5 188 45.7
EL10Ac3g05153 Beta vulgaris HOM05D007583 ORTHO05D009591 2.8e-32 142.5 162 50.0
FAN10G1550 Fragaria x ananassa HOM05D007583 ORTHO05D009591 2.8e-32 142.5 174 53.4
CARHR235290 Cardamine hirsuta HOM05D007583 ORTHO05D009591 4.8e-32 141.7 175 48.6
Potri.012G007200 Populus trichocarpa HOM05D007583 ORTHO05D009591 1.4e-31 140.2 166 51.2
Sabra12G0008700 Salix brachista HOM05D007583 ORTHO05D009591 1.4e-31 140.2 167 51.5
Rhsim03G0216800 Rhododendron simsii HOM05D007583 ORTHO05D009591 1.8e-31 139.8 164 51.8
FAN01G0256 Fragaria x ananassa HOM05D007583 ORTHO05D009591 4.1e-31 138.7 174 53.4
Potri.015G003800 Populus trichocarpa HOM05D007583 ORTHO05D009591 4.1e-31 138.7 168 51.2
Sabra12G0004200 Salix brachista HOM05D007583 ORTHO05D009591 4.1e-31 138.7 169 52.1
Thhalv10026470m.g Eutrema salsugineum HOM05D007583 ORTHO05D009591 1.6e-30 136.7 182 46.2
MSTRG.8601 Avicennia marina HOM05D007583 ORTHO05D009591 2.6e-30 136.0 174 48.3
Sabra15G0002500 Salix brachista HOM05D007583 ORTHO05D009591 2.6e-30 136.0 167 50.9
GSVIVG01038661001 Vitis vinifera HOM05D007583 ORTHO05D009591 3.5e-30 135.6 109 64.2
Cc02_g00730 Coffea canephora HOM05D007583 ORTHO05D009591 4.5e-30 135.2 170 48.2
AT4G27590 Arabidopsis thaliana HOM05D007583 ORTHO05D009591 5.9e-30 134.8 174 46.6
PSO782G1249 Papaver somniferum HOM05D007583 ORTHO05D009591 1.0e-29 134.0 158 50.6
CSS0038047 Camellia sinensis var. sinensis HOM05D007583 ORTHO05D009591 2.2e-29 132.9 163 49.7
TAR374G0489 Trochodendron aralioides HOM05D007583 ORTHO05D009591 2.2e-29 132.9 153 50.3
CSS0020696 Camellia sinensis var. sinensis HOM05D007583 ORTHO05D009591 5.0e-29 131.7 163 49.1
Hund09725 Selenicereus undatus HOM05D007583 ORTHO05D009591 5.0e-29 131.7 153 49.7
PSO063G3856 Papaver somniferum HOM05D007583 ORTHO05D009591 8.5e-29 131.0 158 50.0
Nn1g00469 Nelumbo nucifera HOM05D007583 ORTHO05D009591 1.1e-28 130.6 159 47.8
vmacro06454 Vaccinium macrocarpon HOM05D007583 ORTHO05D009591 1.1e-28 130.6 164 48.2
TWI23G1098 Tripterygium wilfordii HOM05D007583 ORTHO05D009591 9.4e-28 127.5 170 46.5
Lsat_1_v5_gn_6_32000 Lactuca sativa HOM05D007583 ORTHO05D009591 4.7e-27 125.2 169 46.2
Rhsim03G0216700 Rhododendron simsii HOM05D007583 ORTHO05D009591 1.1e-25 120.6 107 58.9
Glyma.14G189600 Glycine max HOM05D007583 ORTHO05D009591 1.7e-24 116.7 128 55.5
Migut.F00139 Erythranthe guttata HOM05D007583 ORTHO05D009591 3.7e-24 115.5 176 41.5
Os04g0581800 Oryza sativa ssp. japonica HOM05D007583 ORTHO05D009591 8.2e-24 114.4 133 47.4
HanXRQChr04g0117921 Helianthus annuus HOM05D007583 ORTHO05D009591 2.4e-23 112.8 161 46.0
ClCG07G009640 Citrullus lanatus HOM05D007583 ORTHO05D009591 5.3e-23 111.7 106 55.7
Zm00001eb072980 Zea mays HOM05D007583 ORTHO05D009591 7.0e-23 111.3 129 48.8
Atru.chr12.2485 Acer truncatum HOM05D007583 ORTHO05D009591 2.0e-22 109.8 134 48.5
Sed0020934 Sechium edule HOM05D007583 ORTHO05D009591 1.9e-20 103.2 168 44.6
Medtr5g069205 Medicago truncatula HOM05D007583 ORTHO05D009591 1.4e-18 97.1 100 59.0
SEGI_22545 Sequoiadendron giganteum HOM05D007583 ORTHO05D009591 5.9e-14 81.6 107 40.2
SEGI_12104 Sequoiadendron giganteum HOM05D007583 ORTHO05D009591 1.5e-12 77.0 107 39.3
HPP92_015070 Vanilla planifolia HOM05D007583 ORTHO05D009591 1.3e-08 63.9 63 50.8
PSO782G0994 Papaver somniferum HOM05D000262 ORTHO05D005718 1.1e-07 60.8 97 38.1


User provided reference genes

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