Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004652g0010 Nicotiana tabacum HOM05D007358 ORTHO05D009117 3.1e-87 326.6 480 100.0
Nitab4.5_0000080g0200 Nicotiana tabacum HOM05D007358 ORTHO05D009117 1.3e-77 294.7 478 96.4
PGSC0003DMG400009102 Solanum tuberosum HOM05D007358 ORTHO05D009117 7.3e-60 235.7 476 89.7
Solyc03g007390.4 Solanum lycopersicum HOM05D007358 ORTHO05D009117 3.2e-47 193.7 476 86.3
Sopen03g003350 Solanum pennellii HOM05D007358 ORTHO05D009117 3.5e-46 190.3 476 86.6
Hma1.2p1_0013F.1_g008840 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.0e-29 135.6 468 68.4
Peaxi162Scf00566g00064 Petunia axillaris HOM05D007358 ORTHO05D009117 1.6e-27 128.3 73 86.3
CAN.G108.28 Capsicum annuum HOM05D007358 ORTHO05D009117 2.8e-27 127.5 68 91.2
Eucgr.I01754 Eucalyptus grandis HOM05D007358 ORTHO05D009117 1.3e-21 108.6 474 68.6
Hma1.2p1_0013F.1_g008830 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.3e-21 108.6 79 62.0
Cpa.g.sc108.57 Carica papaya HOM05D007358 ORTHO05D009117 5.1e-21 106.7 474 52.3
Dinv33449 Davidia involucrata HOM05D007358 ORTHO05D009117 6.6e-21 106.3 79 59.5
CANSAT64G1792 Cannabis sativa HOM05D007358 ORTHO05D009117 3.3e-20 104.0 470 75.7
Haze_14729 Corylus avellana HOM05D007358 ORTHO05D009117 7.4e-20 102.8 79 60.8
Cfa007380 Carpinus fangiana HOM05D007358 ORTHO05D009117 9.6e-20 102.4 79 60.8
SGA_v2.0_scaffold122G33180 Striga asiatica HOM05D007358 ORTHO05D009117 1.6e-19 101.7 83 59.0
MSTRG.8212 Avicennia marina HOM05D007358 ORTHO05D009117 2.1e-19 101.3 81 59.3
Ciclev10018361m.g Citrus clementina HOM05D007358 ORTHO05D009117 4.8e-19 100.1 79 57.0
Lj2C1075G10 Lonicera japonica HOM05D007358 ORTHO05D009117 1.8e-18 98.2 79 51.9
Sed0015079 Sechium edule HOM05D007358 ORTHO05D009117 1.8e-18 98.2 79 50.6
SalBow6G1669 Salvia bowleyana HOM05D007358 ORTHO05D009117 2.4e-18 97.8 81 58.0
CSS0000420 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 3.1e-18 97.4 79 55.7
CSS0010405 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 4.0e-18 97.1 79 54.4
Cc09_g03920 Coffea canephora HOM05D007358 ORTHO05D009117 4.0e-18 97.1 79 58.2
AUR62023937 Chenopodium quinoa HOM05D007358 ORTHO05D009117 5.3e-18 96.7 79 54.4
Migut.F01873 Erythranthe guttata HOM05D007358 ORTHO05D009117 6.9e-18 96.3 83 56.6
Sc03g0011070 Simmondsia chinensis HOM05D007358 ORTHO05D009117 1.5e-17 95.1 75 58.7
CiPaw.03G042400 Carya illinoinensis HOM05D007358 ORTHO05D009117 2.0e-17 94.7 79 55.7
TWI12G0702 Tripterygium wilfordii HOM05D007358 ORTHO05D009117 2.0e-17 94.7 79 55.7
Atru.BG.30.p Acer truncatum HOM05D007358 ORTHO05D009117 2.6e-17 94.4 79 54.4
Oeu037939.3 Olea europaea HOM05D007358 ORTHO05D009117 2.6e-17 94.4 81 58.0
RcHm_v2.0_Chr2g0173011 Rosa chinensis HOM05D007358 ORTHO05D009117 5.8e-17 93.2 81 53.1
ClCG09G019220 Citrullus lanatus HOM05D007358 ORTHO05D009117 7.6e-17 92.8 79 50.6
FAN04G0278 Fragaria x ananassa HOM05D007358 ORTHO05D009117 9.9e-17 92.4 81 51.9
FAN04G1709 Fragaria x ananassa HOM05D007358 ORTHO05D009117 9.9e-17 92.4 81 51.9
GSVIVG01008360001 Vitis vinifera HOM05D007358 ORTHO05D009117 1.7e-16 91.7 79 54.4
Ah.01g004590 Amaranthus hybridus HOM05D007358 ORTHO05D009117 2.2e-16 91.3 75 53.3
Prupe.3G290200 Prunus persica HOM05D007358 ORTHO05D009117 2.2e-16 91.3 79 50.6
MD09G1028300 Malus domestica HOM05D007358 ORTHO05D009117 4.9e-16 90.1 80 55.0
CSS0028376 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 1.1e-15 89.0 213 29.1
Hund17802 Selenicereus undatus HOM05D007358 ORTHO05D009117 1.1e-15 89.0 75 53.3
CsaV3_5G027190 Cucumis sativus L. HOM05D007358 ORTHO05D009117 1.4e-15 88.6 79 48.1
EL10Ac9g21083 Beta vulgaris HOM05D007358 ORTHO05D009117 1.9e-15 88.2 71 54.9
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 1.9e-15 88.2 79 53.2
FvH4_5g31860 Fragaria vesca HOM05D007358 ORTHO05D009117 2.4e-15 87.8 81 49.4
Manes.17G021400 Manihot esculenta HOM05D007358 ORTHO05D009117 2.4e-15 87.8 79 51.9
Actinidia06003 Actinidia chinensis HOM05D007358 ORTHO05D009117 4.2e-15 87.0 71 53.5
CSS0022172 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 5.5e-15 86.7 74 51.4
vmacro05457 Vaccinium macrocarpon HOM05D007358 ORTHO05D009117 5.5e-15 86.7 79 51.9
MBI17_g07976_MAGBIO Magnolia biondii HOM05D007358 ORTHO05D009117 9.3e-15 85.9 79 53.2
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 1.2e-14 85.5 79 50.6
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 1.2e-14 85.5 79 50.6
Nn2g12649 Nelumbo nucifera HOM05D007358 ORTHO05D009117 1.2e-14 85.5 79 50.6
HanXRQChr17g0537401 Helianthus annuus HOM05D007358 ORTHO05D009117 2.7e-14 84.3 78 47.4
Lsat_1_v5_gn_3_20581 Lactuca sativa HOM05D007358 ORTHO05D009117 2.7e-14 84.3 76 48.7
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 3.5e-14 84.0 79 45.6
CARHR261620 Cardamine hirsuta HOM05D007358 ORTHO05D009117 3.5e-14 84.0 79 46.8
Ca_04155_v3 Cicer arietinum L. HOM05D007358 ORTHO05D009117 3.5e-14 84.0 79 46.8
BcaB06g27500 Brassica carinata HOM05D007358 ORTHO05D009117 4.6e-14 83.6 78 51.3
QL02p074974 Quercus lobata HOM05D007358 ORTHO05D009117 4.6e-14 83.6 80 51.2
QL02p075081 Quercus lobata HOM05D007358 ORTHO05D009117 4.6e-14 83.6 65 56.9
THA.LOC104805375 Tarenaya hassleriana HOM05D007358 ORTHO05D009117 6.0e-14 83.2 79 48.1
Aa31LG9G1210 Aethionema arabicum HOM05D007358 ORTHO05D009117 1.3e-13 82.0 79 48.1
QL06p022929 Quercus lobata HOM05D007358 ORTHO05D009117 1.8e-13 81.6 65 56.9
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 3.9e-13 80.5 80 47.5
Lalb_Chr24g0394951 Lupinus albus HOM05D007358 ORTHO05D009117 5.1e-13 80.1 80 50.0
Potri.017G071600 Populus trichocarpa HOM05D007358 ORTHO05D009117 5.1e-13 80.1 79 46.8
Sabra17G0060800 Salix brachista HOM05D007358 ORTHO05D009117 5.1e-13 80.1 79 48.1
Gohir.D11G070700 Gossypium hirsutum HOM05D007358 ORTHO05D009117 6.7e-13 79.7 77 49.4
Gorai.007G075800 Gossypium raimondii HOM05D007358 ORTHO05D009117 6.7e-13 79.7 77 49.4
PGR142G1723 Punica granatum HOM05D007358 ORTHO05D009117 1.1e-12 79.0 78 47.4
Rhsim11G0131500 Rhododendron simsii HOM05D007358 ORTHO05D009117 1.1e-12 79.0 72 52.8
A04p13440 Brassica napus HOM05D007358 ORTHO05D009117 1.5e-12 78.6 79 50.6
Carub.0007s3520 Capsella rubella HOM05D007358 ORTHO05D009117 1.5e-12 78.6 79 50.6
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.9e-12 78.2 83 42.2
TPR.G14066 Trifolium pratense HOM05D007358 ORTHO05D009117 1.9e-12 78.2 80 47.5
ECA246G0598 Erigeron canadensis HOM05D007358 ORTHO05D009117 2.5e-12 77.8 208 26.9
Lj2g0013463 Lotus japonicus HOM05D007358 ORTHO05D009117 2.5e-12 77.8 81 44.4
Sp7g01520 Schrenkiella parvula HOM05D007358 ORTHO05D009117 2.5e-12 77.8 80 48.8
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 3.3e-12 77.4 79 49.4
Gohir.A11G066500 Gossypium hirsutum HOM05D007358 ORTHO05D009117 4.3e-12 77.0 76 48.7
VMungo0464G1987 Vigna mungo HOM05D007358 ORTHO05D009117 4.3e-12 77.0 83 42.2
AL7G49460 Arabidopsis lyrata HOM05D007358 ORTHO05D009117 5.6e-12 76.6 76 50.0
AT5G40400 Arabidopsis thaliana HOM05D007358 ORTHO05D009117 7.4e-12 76.3 76 48.7
DCAR_000707 Daucus carota HOM05D007358 ORTHO05D009117 7.4e-12 76.3 82 42.7
SHI16405 Sapria himalayana HOM05D007358 ORTHO05D009117 1.3e-11 75.5 81 49.4
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 1.6e-11 75.1 79 44.3
Thecc.04G015800 Theobroma cacao HOM05D007358 ORTHO05D009117 1.6e-11 75.1 77 46.8
Phvul.003G017200 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 2.8e-11 74.3 83 39.8
Thhalv10027688m.g Eutrema salsugineum HOM05D007358 ORTHO05D009117 4.8e-11 73.6 76 46.1
Glyma.05G004200 Glycine max HOM05D007358 ORTHO05D009117 6.2e-11 73.2 83 42.2
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.1e-10 72.4 83 38.6
Phvul.004G009641 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.4e-10 72.0 83 38.6
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.4e-10 72.0 83 38.6
Phvul.004G009900 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 3.1e-10 70.9 83 38.6
CDE04G1234 Ceratophyllum demersum HOM05D007358 ORTHO05D009117 6.9e-10 69.7 79 43.0
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 2.2e-08 64.7 79 35.4
Actinidia36108 Actinidia chinensis HOM05D007358 ORTHO05D009117 1.9e-07 61.6 56 48.2
SEGI_31001 Sequoiadendron giganteum HOM05D007358 ORTHO05D009117 7.9e-06 56.2 82 35.4


User provided reference genes

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