Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004637g0060 Nicotiana tabacum HOM05D003801 ORTHO05D004812 0.0e+00 1180.2 654 100.0
Nitab4.5_0000486g0130 Nicotiana tabacum HOM05D003801 ORTHO05D004812 0.0e+00 1095.1 628 96.7
Nitab4.5_0004906g0050 Nicotiana tabacum HOM05D003801 ORTHO05D004812 0.0e+00 1087.0 619 97.1
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 1.1e-273 946.4 620 86.0
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 2.9e-269 931.8 628 83.4
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 2.7e-267 925.2 629 83.3
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 3.9e-266 921.4 620 83.9
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 5.0e-245 851.3 625 75.2
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 2.3e-242 842.4 628 74.5
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 2.8e-240 835.5 628 74.7
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 4.2e-236 821.6 619 71.7
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 9.7e-233 810.4 627 71.0
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 6.3e-232 807.7 622 70.9
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 1.4e-231 806.6 633 69.8
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 1.4e-231 806.6 620 72.7
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 8.5e-229 797.3 618 72.5
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 1.1e-228 797.0 632 71.2
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 8.0e-227 790.8 619 70.4
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 6.8e-226 787.7 620 70.5
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 8.8e-226 787.3 649 68.7
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 1.2e-225 786.9 631 67.7
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 2.0e-225 786.2 620 68.4
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 2.8e-224 782.3 628 69.1
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 6.3e-224 781.2 625 70.4
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 8.3e-224 780.8 620 71.5
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 4.1e-223 778.5 610 70.0
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 4.5e-222 775.0 618 67.6
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 4.5e-222 775.0 621 69.9
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 5.9e-222 774.6 625 70.4
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 1.0e-221 773.9 610 67.4
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 2.2e-221 772.7 619 66.2
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 2.2e-221 772.7 619 69.3
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 5.0e-221 771.5 620 69.4
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 8.5e-221 770.8 634 66.6
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 9.5e-220 767.3 624 69.6
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 1.6e-219 766.5 629 70.4
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 1.0e-218 763.8 622 69.6
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 1.8e-218 763.1 627 67.6
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 1.8e-218 763.1 621 66.0
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 5.2e-218 761.5 629 67.7
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 8.8e-218 760.8 629 65.8
Lj1A124T30 Lonicera japonica HOM05D003801 ORTHO05D004812 2.0e-217 759.6 630 66.8
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 9.8e-217 757.3 619 65.3
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 9.8e-217 757.3 621 66.5
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 2.8e-216 755.7 629 65.2
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 1.1e-215 753.8 619 69.1
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 1.8e-215 753.1 621 65.5
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 1.8e-215 753.1 619 66.1
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 4.1e-215 751.9 619 65.9
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 5.4e-215 751.5 623 66.6
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 3.5e-214 748.8 619 65.9
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 7.8e-214 747.7 630 65.2
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 2.3e-213 746.1 622 65.4
Dinv12255 Davidia involucrata HOM05D003801 ORTHO05D004812 2.5e-212 742.7 625 69.6
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 2.5e-212 742.7 632 64.2
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 3.3e-212 742.3 574 68.1
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 9.5e-212 740.7 630 64.4
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 1.6e-211 740.0 620 64.5
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 1.6e-211 740.0 606 68.6
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 6.1e-211 738.0 620 68.9
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 1.0e-210 737.3 636 67.3
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 1.4e-210 736.9 666 61.7
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 2.3e-210 736.1 631 67.0
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 1.2e-209 733.8 599 69.1
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.5e-209 733.4 642 62.3
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 5.7e-209 731.5 641 62.2
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 5.7e-209 731.5 540 74.1
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 5.7e-209 731.5 593 66.1
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 7.5e-209 731.1 619 64.0
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 1.1e-207 727.2 662 61.5
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 1.1e-207 727.2 619 61.9
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 1.4e-207 726.9 534 70.8
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 4.1e-207 725.3 596 68.3
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 5.4e-207 724.9 601 63.1
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 7.0e-207 724.5 619 65.3
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 1.6e-206 723.4 549 69.8
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 2.0e-206 723.0 629 63.0
Hma1.2p1_1421F.1_g282490 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 2.7e-206 722.6 523 72.5
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 3.5e-206 722.2 634 62.9
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 1.7e-205 719.9 616 64.3
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 3.0e-205 719.2 652 63.2
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 5.0e-205 718.4 619 66.1
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 2.5e-204 716.1 684 61.7
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 9.5e-204 714.1 621 66.3
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 1.4e-202 710.3 619 60.9
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 1.8e-202 709.9 631 63.1
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 8.9e-202 707.6 619 61.4
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 1.2e-201 707.2 618 60.8
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 2.6e-201 706.1 544 67.1
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 3.4e-201 705.7 619 60.7
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 3.4e-201 705.7 618 60.4
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 1.7e-200 703.4 622 64.5
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 1.7e-200 703.4 619 61.1
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 2.2e-200 703.0 619 60.9
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 2.2e-200 703.0 629 60.6
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 2.9e-200 702.6 618 60.2
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 2.4e-199 699.5 610 60.5
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 5.4e-199 698.4 610 60.3
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 7.0e-199 698.0 619 60.1
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.6e-198 696.8 642 62.8
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 5.0e-197 691.8 549 66.1
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 2.8e-195 686.0 549 65.9
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 3.7e-192 675.6 634 60.4
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 4.9e-192 675.2 608 62.3
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 4.9e-192 675.2 551 64.8
BcaB03g13435 Brassica carinata HOM05D003801 ORTHO05D004812 1.4e-191 673.7 539 64.2
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 7.1e-191 671.4 666 55.9
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 5.6e-188 661.8 651 56.2
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 3.2e-183 646.0 635 58.9
Cc01_g14930 Coffea canephora HOM05D003801 ORTHO05D004812 1.7e-173 613.6 419 79.7
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 1.4e-170 604.0 458 68.6
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 1.8e-170 603.6 545 58.0
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 6.0e-158 562.0 563 52.2
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 3.9e-157 559.3 567 51.3
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 1.9e-156 557.0 391 81.6
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 1.1e-154 551.2 389 73.8
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 1.1e-154 551.2 382 79.3
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 2.9e-152 543.1 600 50.2
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 1.1e-148 531.2 555 53.2
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 4.8e-147 525.8 382 77.2
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 3.7e-139 499.6 561 49.2
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 8.2e-123 445.3 409 57.0
Os10g0492000 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 8.0e-118 428.7 399 58.6
Sabra19G0124700 Salix brachista HOM05D003801 ORTHO05D004812 1.8e-114 417.5 347 65.1
Oeu050039.1 Olea europaea HOM05D003801 ORTHO05D004812 8.8e-109 398.7 571 48.2
HPP92_014542 Vanilla planifolia HOM05D003801 ORTHO05D004812 2.1e-102 377.5 370 56.8
MBI07_g35968_MAGBIO Magnolia biondii HOM05D003801 ORTHO05D004812 4.7e-102 376.3 275 70.5
Os10g0492300 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 8.3e-99 365.5 416 47.8
MBI15_g33038_MAGBIO Magnolia biondii HOM05D003801 ORTHO05D004812 1.4e-98 364.8 298 67.1
Lj6A615T90 Lonicera japonica HOM05D003801 ORTHO05D004812 3.7e-91 340.1 403 53.1
Sabra19G0125300 Salix brachista HOM05D003801 ORTHO05D004812 1.1e-85 322.0 265 63.8
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 4.3e-79 300.1 562 36.3
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 5.1e-72 276.6 253 56.5
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 3.3e-71 273.9 348 48.9
Actinidia23184 Actinidia chinensis HOM05D003801 ORTHO05D004812 5.6e-71 273.1 428 43.7
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 1.6e-70 271.6 287 49.1
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 4.2e-66 256.9 522 31.0
Cre10.g452450 Chlamydomonas reinhardtii HOM05D003801 ORTHO05D004812 1.7e-64 251.5 531 33.0
PSO339G0950 Papaver somniferum HOM05D003801 ORTHO05D004812 1.5e-63 248.4 219 55.3
AL1G17110 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 9.6e-63 245.7 210 63.3
Sabra19G0124600 Salix brachista HOM05D003801 ORTHO05D004812 8.1e-62 242.7 267 55.1
PSO339G3141 Papaver somniferum HOM05D003801 ORTHO05D004812 2.0e-60 238.0 244 52.0
Cc01_g14920 Coffea canephora HOM05D003801 ORTHO05D004812 6.4e-59 233.0 207 63.8
CDE07G0033 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 6.0e-57 226.5 389 40.4
SHI19239 Sapria himalayana HOM05D003801 ORTHO05D004812 3.9e-56 223.8 294 45.6
CDE07G0490 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 4.5e-52 210.3 536 31.3
CANSAT80G1859 Cannabis sativa HOM05D003801 ORTHO05D004812 1.9e-47 194.9 139 71.9
Hma1.2p1_1586F.1_g292120 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 5.8e-44 183.3 183 59.6
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 9.9e-44 182.6 251 47.0
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 2.3e-40 171.4 171 55.0
BcaB02g06769 Brassica carinata HOM05D003801 ORTHO05D004812 2.5e-39 167.9 291 38.5
SHI19243 Sapria himalayana HOM05D003801 ORTHO05D004812 5.6e-39 166.8 196 47.4
CSS0035288 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 2.6e-36 157.9 124 77.4
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 1.0e-24 119.4 161 46.0
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.4e-24 119.0 98 63.3
Oeu050040.1 Olea europaea HOM05D003801 ORTHO05D004812 1.4e-24 119.0 66 92.4
SHI19242 Sapria himalayana HOM05D003801 ORTHO05D004812 1.4e-24 119.0 121 52.9
AL1G16970 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 5.1e-24 117.1 77 72.7
AL1G17100 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 5.1e-24 117.1 77 72.7
TAR629G1141 Trochodendron aralioides HOM05D000566 ORTHO05D000686 2.2e-19 101.7 66 75.8
BolC1t02191H Brassica oleracea HOM05D003801 ORTHO05D017532 2.9e-19 101.3 170 40.6
BolC1t01884H Brassica oleracea HOM05D003801 ORTHO05D017532 1.1e-18 99.4 174 40.8
Os10g0492101 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 2.1e-17 95.1 115 48.7
VMungo1215G2313 Vigna mungo HOM05D003801 ORTHO05D004812 2.3e-16 91.7 67 67.2
C01p22580 Brassica napus HOM05D003801 ORTHO05D017532 5.7e-15 87.0 158 38.6
Glyma.11G162400 Glycine max HOM05D003801 ORTHO05D004812 3.1e-13 81.3 53 71.7
Phvul.003G243600 Phaseolus vulgaris HOM05D002898 ORTHO05D003424 6.3e-06 57.0 165 32.1


User provided reference genes

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