Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 7.3e-198 693.7 358 100.0
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.3e-191 672.9 358 97.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 3.2e-153 545.4 358 79.6
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.6e-152 543.1 360 80.6
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 6.0e-152 541.2 358 78.8
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 6.2e-149 531.2 358 79.3
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 3.4e-123 445.7 355 65.6
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 2.5e-121 439.5 275 84.0
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.7e-112 409.5 359 60.4
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 6.1e-112 408.3 361 60.7
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 2.2e-109 399.8 364 59.3
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.5e-107 392.5 340 60.0
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 5.0e-106 388.7 357 58.5
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.2e-102 377.5 361 57.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.5e-102 377.1 365 56.4
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.5e-102 377.1 290 70.3
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.0e-102 376.7 315 61.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.6e-102 376.3 361 57.6
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 4.4e-102 375.6 300 64.7
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.3e-101 374.0 364 58.2
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 2.2e-101 373.2 360 57.5
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.8e-101 372.9 268 72.0
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 6.3e-101 371.7 308 63.6
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.1e-100 370.9 274 69.3
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.8e-100 370.2 286 66.4
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 3.1e-100 369.4 286 65.4
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.1e-100 369.0 382 55.0
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 5.4e-100 368.6 360 57.8
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 7.0e-100 368.2 356 56.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 9.1e-100 367.9 283 66.8
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 9.1e-100 367.9 289 65.1
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.2e-99 367.5 286 65.4
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.2e-99 367.5 378 55.8
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 1.6e-99 367.1 340 59.4
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.6e-99 367.1 386 55.2
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 2.7e-99 366.3 364 56.6
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 3.5e-99 365.9 356 58.1
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.7e-98 363.6 326 60.7
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 2.3e-98 363.2 355 56.9
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 8.6e-98 361.3 364 56.3
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.9e-97 360.1 301 64.8
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 7.2e-97 358.2 240 72.9
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 7.2e-97 358.2 330 58.2
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 7.2e-97 358.2 402 53.0
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 7.2e-97 358.2 354 56.2
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.2e-96 357.5 403 51.9
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 6.1e-96 355.1 363 56.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 8.0e-96 354.8 250 71.2
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 2.3e-95 353.2 307 59.9
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.5e-94 350.5 345 56.2
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.0e-94 350.1 301 60.1
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 9.8e-94 347.8 252 70.2
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 4.9e-93 345.5 337 57.0
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 4.1e-92 342.4 357 55.2
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.2e-91 340.9 340 55.0
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.3e-90 337.4 336 56.0
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.8e-90 335.9 317 56.2
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 3.3e-89 332.8 355 54.1
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 9.5e-89 331.3 282 62.4
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 6.1e-88 328.6 341 54.5
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.0e-87 327.8 362 52.5
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.0e-87 327.8 242 66.9
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 2.0e-86 323.6 305 58.4
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 2.9e-85 319.7 245 67.8
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 3.7e-85 319.3 347 53.3
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 3.7e-85 319.3 257 64.6
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.8e-84 317.0 266 60.9
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.8e-84 317.0 362 51.9
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.8e-84 317.0 234 67.5
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 2.4e-84 316.6 356 52.0
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 5.4e-84 315.5 268 61.9
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 7.0e-84 315.1 268 62.3
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 9.2e-84 314.7 262 61.8
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 9.2e-84 314.7 337 52.5
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.2e-83 314.3 263 64.3
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.6e-83 313.9 290 57.9
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.6e-83 313.9 256 63.3
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 4.6e-83 312.4 242 65.3
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 6.0e-83 312.0 268 60.8
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.0e-82 309.7 283 58.0
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 3.9e-82 309.3 341 51.6
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 3.9e-82 309.3 252 64.3
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 6.6e-82 308.5 268 60.8
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 8.6e-82 308.1 247 63.6
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 8.6e-82 308.1 247 63.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 8.6e-82 308.1 242 64.5
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.1e-81 307.8 242 65.7
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.5e-81 307.4 231 66.7
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.5e-81 307.4 231 66.7
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.5e-81 307.4 231 66.7
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.9e-81 307.0 278 57.9
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.9e-81 307.0 283 57.6
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 4.3e-81 305.8 221 71.5
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.2e-80 304.3 212 72.6
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.6e-80 303.9 248 63.3
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 3.6e-80 302.8 237 63.3
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.8e-79 300.4 188 77.7
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.8e-79 300.4 261 61.7
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 2.3e-79 300.1 234 65.0
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.0e-79 299.3 338 51.2
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.0e-78 297.0 301 55.8
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.6e-78 296.6 306 53.9
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 9.8e-78 294.7 235 62.1
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 2.9e-77 293.1 235 65.5
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.2e-72 277.7 189 72.5
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 9.2e-68 261.5 271 53.9
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 2.1e-64 250.4 243 53.1
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 2.0e-62 243.8 150 79.3
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 2.0e-62 243.8 209 56.9
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 4.2e-60 236.1 276 48.9
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 1.6e-59 234.2 265 48.7
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.1e-52 211.5 121 81.0
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 4.6e-51 206.1 239 49.4
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 5.1e-50 202.6 314 39.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 9.6e-49 198.4 177 55.4
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.6e-48 197.6 103 88.3
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.5e-46 189.5 241 45.6
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 7.6e-46 188.7 237 44.3
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.5e-30 137.9 69 88.4
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 4.5e-30 136.3 79 75.9
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.6e-24 117.9 197 41.1
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.7e-13 81.3 58 63.8
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 6.3e-08 62.8 135 32.6
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.8e-07 61.2 43 65.1


User provided reference genes

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