Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.5e-71 272.7 136 100.0
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.2e-60 236.5 131 92.4
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 1.9e-45 186.0 125 78.4
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 3.2e-37 158.7 142 69.7
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 2.3e-35 152.5 130 69.2
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 1.5e-34 149.8 130 69.2
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 3.4e-31 138.7 143 53.8
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 2.1e-20 102.8 131 45.0
Nitab4.5_0005678g0020 Nicotiana tabacum HOM05D020724 ORTHO05D025910 2.1e-20 102.8 146 46.6
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 3.6e-20 102.1 124 52.4
Nitab4.5_0000203g0180 Nicotiana tabacum HOM05D020724 ORTHO05D025910 1.4e-19 100.1 148 45.9
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 5.7e-18 94.7 116 45.7
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.3e-17 93.6 99 52.5
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 1.7e-17 93.2 117 45.3
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 1.7e-17 93.2 147 38.8
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 2.2e-17 92.8 133 41.4
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 4.8e-17 91.7 151 39.7
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 6.3e-17 91.3 142 41.5
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 6.3e-17 91.3 106 50.9
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 6.3e-17 91.3 131 46.6
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 8.2e-17 90.9 122 46.7
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 1.8e-16 89.7 127 40.2
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 1.8e-16 89.7 125 40.8
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 4.1e-16 88.6 119 46.2
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 6.9e-16 87.8 125 40.0
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 6.9e-16 87.8 125 40.0
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 9.1e-16 87.4 145 38.6
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 1.5e-15 86.7 145 42.1
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 1.5e-15 86.7 156 35.9
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 2.0e-15 86.3 102 47.1
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 2.6e-15 85.9 104 47.1
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 3.4e-15 85.5 109 42.2
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 3.4e-15 85.5 94 48.9
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 4.5e-15 85.1 122 41.8
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 4.5e-15 85.1 122 42.6
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 5.9e-15 84.7 116 42.2
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 5.9e-15 84.7 135 37.8
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 7.7e-15 84.3 108 43.5
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 7.7e-15 84.3 115 45.2
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.3e-14 83.6 123 41.5
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.2e-14 82.8 105 42.9
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 2.9e-14 82.4 97 47.4
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 2.9e-14 82.4 123 40.7
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.8e-14 82.0 123 40.7
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 6.5e-14 81.3 99 44.4
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 8.5e-14 80.9 119 42.0
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 1.1e-13 80.5 121 40.5
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 1.1e-13 80.5 124 41.1
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 1.4e-13 80.1 113 40.7
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 1.9e-13 79.7 123 39.8
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 3.2e-13 79.0 132 38.6
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 4.2e-13 78.6 96 46.9
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 1.2e-12 77.0 83 50.6
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 1.2e-12 77.0 108 41.7
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 1.2e-12 77.0 93 45.2
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 4.7e-12 75.1 146 37.0
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 4.7e-12 75.1 108 46.3
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 4.7e-12 75.1 110 40.0
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 4.7e-12 75.1 108 39.8
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 7.9e-12 74.3 124 37.1
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 7.9e-12 74.3 120 41.7
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 7.9e-12 74.3 81 48.1
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.0e-11 73.9 104 40.4
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.0e-11 73.9 142 35.2
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 1.8e-11 73.2 114 37.7
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 2.3e-11 72.8 110 40.0
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 3.0e-11 72.4 149 33.6
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 3.9e-11 72.0 122 36.1
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 6.7e-11 71.2 121 38.0
PGSC0003DMG400013474 Solanum tuberosum HOM05D020724 ORTHO05D025910 6.7e-11 71.2 99 43.4
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 8.8e-11 70.9 122 39.3
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 1.1e-10 70.5 99 42.4
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 1.5e-10 70.1 82 47.6
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 2.0e-10 69.7 110 40.9
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 2.0e-10 69.7 129 34.1
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 2.0e-10 69.7 67 52.2
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.6e-10 69.3 122 38.5
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 2.6e-10 69.3 109 42.2
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 3.3e-10 68.9 114 36.8
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 5.7e-10 68.2 85 45.9
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 5.7e-10 68.2 142 32.4
MSTRG.591 Avicennia marina HOM05D007558 ORTHO05D009245 1.3e-09 67.0 100 43.0
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 1.3e-09 67.0 114 37.7
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 1.3e-09 67.0 117 36.8
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 1.7e-09 66.6 130 36.9
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 1.7e-09 66.6 108 41.7
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 2.8e-09 65.9 86 43.0
Sopen05g001330 Solanum pennellii HOM05D020724 ORTHO05D025910 3.7e-09 65.5 97 40.2
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 4.8e-09 65.1 82 45.1
Solyc05g005320.1 Solanum lycopersicum HOM05D020724 ORTHO05D025910 4.8e-09 65.1 98 38.8
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 6.3e-09 64.7 145 36.6
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 1.1e-08 63.9 139 34.5
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 1.1e-08 63.9 87 46.0
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 1.1e-08 63.9 78 46.2
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 1.4e-08 63.5 109 38.5
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 1.8e-08 63.2 131 35.1
SalBow8G4409 Salvia bowleyana HOM05D007558 ORTHO05D009245 2.4e-08 62.8 151 32.5
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 3.1e-08 62.4 138 33.3
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 4.1e-08 62.0 122 37.7
Ah.02g129970 Amaranthus hybridus HOM05D023191 ORTHO05D009245 2.6e-07 59.3 56 50.0
Sed0023819 Sechium edule HOM05D007558 ORTHO05D009245 2.6e-07 59.3 76 44.7
Sp5g25540 Schrenkiella parvula HOM05D008527 ORTHO05D010701 3.4e-07 58.9 79 43.0
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 4.5e-07 58.5 87 43.7
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 4.5e-07 58.5 83 41.0
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 5.9e-07 58.2 105 36.2
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 5.9e-07 58.2 105 36.2
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 5.9e-07 58.2 145 30.3
Manes.13G029400 Manihot esculenta HOM05D007558 ORTHO05D009245 7.7e-07 57.8 81 39.5
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 1.0e-06 57.4 137 33.6
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 1.3e-06 57.0 170 31.2
BcaC08g46489 Brassica carinata HOM05D008527 ORTHO05D010701 1.7e-06 56.6 79 40.5
C06p44320 Brassica napus HOM05D008527 ORTHO05D010701 1.7e-06 56.6 79 40.5
BolC6t39502H Brassica oleracea HOM05D008527 ORTHO05D010701 1.7e-06 56.6 79 40.5
unitig_8.g3942 Utricularia gibba HOM05D007558 ORTHO05D009245 1.7e-06 56.6 84 40.5
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 2.9e-06 55.8 155 29.0
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 2.9e-06 55.8 57 50.9
A09p41140 Brassica napus HOM05D008527 ORTHO05D010701 5.0e-06 55.1 109 35.8
BraA09t39607Z Brassica rapa HOM05D008527 ORTHO05D010701 5.0e-06 55.1 109 35.8
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 6.5e-06 54.7 79 39.2
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 6.5e-06 54.7 79 39.2


User provided reference genes

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