Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 9.8e-91 336.7 156 100.0
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 1.6e-40 169.9 162 54.3
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 3.5e-40 168.7 156 57.1
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 3.5e-40 168.7 136 61.0
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 7.9e-40 167.5 135 60.0
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 3.0e-39 165.6 135 60.0
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 3.3e-38 162.2 132 60.6
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 3.3e-38 162.2 132 60.6
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 4.3e-38 161.8 235 43.4
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 4.3e-38 161.8 132 60.6
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 5.7e-38 161.4 132 61.4
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 3.7e-37 158.7 132 59.8
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 8.2e-37 157.5 132 59.1
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 8.2e-37 157.5 132 59.1
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 8.2e-37 157.5 135 57.8
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 8.2e-37 157.5 156 54.5
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 1.8e-36 156.4 218 44.5
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 1.6e-32 143.3 126 56.3
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 1.0e-31 140.6 116 56.9
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 1.5e-30 136.7 132 52.3
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 5.7e-30 134.8 119 55.5
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 6.1e-24 114.8 97 54.6
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 3.0e-23 112.5 100 54.0
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 1.5e-22 110.2 105 57.1
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 2.2e-21 106.3 82 58.5
Peaxi162Scf00000g58015 Petunia axillaris HOM05D008490 ORTHO05D010725 4.1e-20 102.1 63 76.2
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 1.7e-18 96.7 63 74.6
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 2.5e-17 92.8 130 44.6
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 2.5e-17 92.8 51 72.5
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 7.2e-17 91.3 90 47.8
Nitab4.5_0005831g0100 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.7e-16 89.4 51 66.7
Hma1.2p1_0621F.1_g190810 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 1.8e-15 86.7 54 77.8
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 2.3e-15 86.3 130 38.5
Peaxi162Scf00677g00334 Petunia axillaris HOM05D008490 ORTHO05D010725 6.7e-15 84.7 60 68.3
Nn2g14502 Nelumbo nucifera HOM05D008490 ORTHO05D010725 2.6e-14 82.8 46 71.7
Nitab4.5_0000127g0060 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.0e-11 73.2 78 46.2
MBI05_g40994_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 2.6e-11 72.8 46 71.7
Phvul.002G106400 Phaseolus vulgaris HOM05D008490 ORTHO05D010725 2.2e-10 69.7 43 67.4
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 7.2e-09 64.7 66 48.5
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-08 63.5 78 43.6
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 3.6e-08 62.4 74 43.2
Nitab4.5_0001506g0110 Nicotiana tabacum HOM05D011634 ORTHO05D011721 1.4e-07 60.5 32 87.5
arahy.Tifrunner.gnm1.ann1.38FWT1 Arachis hypogaea HOM05D008490 ORTHO05D010725 6.7e-07 58.2 42 61.9
Potri.007G062081 Populus trichocarpa HOM05D008490 ORTHO05D036895 1.2e-06 57.4 35 71.4
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.5e-06 57.0 73 39.7
Nitab4.5_0008334g0050 Nicotiana tabacum HOM05D008490 ORTHO05D036895 1.5e-06 57.0 38 65.8


User provided reference genes

Program Settings