Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004630g0090 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.5e-40 169.1 85 100.0
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 7.1e-35 150.2 80 91.2
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 2.5e-32 141.7 80 86.2
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 1.3e-31 139.4 80 85.0
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 1.1e-30 136.3 80 81.2
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 3.4e-29 131.3 80 77.5
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 6.7e-25 117.1 80 65.0
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 1.5e-24 115.9 81 65.4
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 3.3e-24 114.8 81 67.9
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 1.3e-23 112.8 81 67.9
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 1.6e-23 112.5 81 65.4
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 1.6e-23 112.5 81 65.4
Rhsim13G0232600 Rhododendron simsii HOM05D007418 ORTHO05D009419 4.8e-23 110.9 77 64.9
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 1.4e-22 109.4 82 64.6
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 4.0e-22 107.8 81 63.0
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 5.3e-22 107.5 77 67.5
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 6.9e-22 107.1 80 62.5
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 9.0e-22 106.7 81 60.5
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 2.6e-21 105.1 81 60.5
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 3.4e-21 104.8 81 63.0
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 7.6e-21 103.6 81 60.5
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 1.7e-20 102.4 68 76.5
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 1.7e-20 102.4 80 60.0
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 2.2e-20 102.1 81 60.5
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 2.9e-20 101.7 81 58.0
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 2.9e-20 101.7 81 60.5
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 6.5e-20 100.5 80 58.8
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 6.5e-20 100.5 81 55.6
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 6.5e-20 100.5 81 59.3
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 1.1e-19 99.8 81 56.8
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 1.4e-19 99.4 81 58.0
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 1.4e-19 99.4 81 54.3
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 2.5e-19 98.6 81 54.3
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 3.2e-19 98.2 81 51.9
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 3.2e-19 98.2 81 55.6
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 4.2e-19 97.8 81 55.6
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 5.5e-19 97.4 80 57.5
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 7.1e-19 97.1 81 50.6
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 7.1e-19 97.1 81 50.6
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 9.3e-19 96.7 82 50.0
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 9.3e-19 96.7 82 50.0
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 1.2e-18 96.3 81 51.9
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 1.6e-18 95.9 81 50.6
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 3.5e-18 94.7 81 54.3
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 3.5e-18 94.7 81 50.6
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 4.6e-18 94.4 79 49.4
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 4.6e-18 94.4 79 49.4
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 4.6e-18 94.4 79 49.4
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 6.0e-18 94.0 80 57.5
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 1.0e-17 93.2 81 51.9
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 6.7e-17 90.5 96 46.9
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 1.1e-16 89.7 81 48.1
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 1.1e-16 89.7 81 53.1
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 1.1e-16 89.7 81 49.4
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 1.1e-16 89.7 81 53.1
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 1.5e-16 89.4 81 51.9
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 1.9e-16 89.0 70 58.6
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 1.9e-16 89.0 80 52.5
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 1.9e-16 89.0 81 54.3
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 4.3e-16 87.8 82 47.6
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 5.7e-16 87.4 80 53.8
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 9.7e-16 86.7 80 52.5
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 1.3e-15 86.3 83 50.6
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 1.6e-15 85.9 82 50.0
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 2.2e-15 85.5 80 51.2
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 3.7e-15 84.7 81 48.1
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 4.8e-15 84.3 80 50.0
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 6.3e-15 84.0 81 45.7
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 8.2e-15 83.6 80 45.0
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 1.1e-14 83.2 80 50.0
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.1e-14 83.2 80 43.8
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 1.4e-14 82.8 80 50.0
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 1.8e-14 82.4 79 46.8
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 2.4e-14 82.0 82 47.6
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 4.1e-14 81.3 81 46.9
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 4.1e-14 81.3 82 42.7
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 4.1e-14 81.3 81 40.7
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 5.3e-14 80.9 76 47.4
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 9.0e-14 80.1 83 49.4
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.2e-13 79.7 82 42.7
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.2e-13 79.7 82 42.7
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.2e-13 79.7 82 42.7
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 1.2e-13 79.7 81 48.1
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 1.5e-13 79.3 81 45.7
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 1.5e-13 79.3 82 42.7
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 1.5e-13 79.3 80 50.0
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 1.3e-12 76.3 82 39.0
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 1.7e-12 75.9 82 41.5
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 2.5e-11 72.0 113 37.2
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 1.6e-10 69.3 81 37.0
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 1.5e-08 62.8 59 49.2
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 4.3e-08 61.2 119 27.7
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 5.7e-08 60.8 85 36.5


User provided reference genes

Program Settings