Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004620g0060 Nicotiana tabacum HOM05D000023 ORTHO05D002750 5.6e-68 260.8 128 100.0
Nitab4.5_0000644g0070 Nicotiana tabacum HOM05D000023 ORTHO05D002750 1.5e-33 146.4 77 90.9
Nitab4.5_0009099g0030 Nicotiana tabacum HOM05D000023 ORTHO05D002750 4.7e-30 134.8 77 83.1
Sopen01g015890 Solanum pennellii HOM05D000023 ORTHO05D002750 5.5e-23 111.3 93 61.3
Sopen08g011680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-22 108.6 85 63.5
Solyc01g020480.1 Solanum lycopersicum HOM05D000023 ORTHO05D000014 1.3e-19 100.1 94 58.5
SHI21431 Sapria himalayana HOM05D005437 ORTHO05D002750 1.5e-12 76.6 66 50.0
SHI16920 Sapria himalayana HOM05D003924 ORTHO05D002750 2.0e-12 76.3 66 50.0
SHI03370 Sapria himalayana HOM05D004002 ORTHO05D000023 3.4e-12 75.5 66 50.0
TWI53G0199 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.5e-12 74.3 71 46.5
SHI10238 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-11 73.6 66 48.5
SHI14664 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-11 73.6 71 46.5
SHI47314 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-11 73.6 71 46.5
SHI47801 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-11 73.6 71 46.5
SHI12781 Sapria himalayana HOM05D000023 ORTHO05D002750 1.7e-11 73.2 71 46.5
SHI01741 Sapria himalayana HOM05D000499 ORTHO05D002036 2.2e-11 72.8 66 47.0
SHI14959 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-11 72.8 66 48.5
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-11 72.8 71 46.5
SHI00996 Sapria himalayana HOM05D002920 ORTHO05D000014 3.7e-11 72.0 66 48.5
SHI07784 Sapria himalayana HOM05D000023 ORTHO05D002750 8.3e-11 70.9 56 53.6
SHI08624 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-10 70.1 71 45.1
GSVIVG01021057001 Vitis vinifera HOM05D000628 ORTHO05D001866 2.4e-10 69.3 66 45.5
SHI03240 Sapria himalayana HOM05D000023 ORTHO05D000014 3.1e-10 68.9 66 47.0
SHI16364 Sapria himalayana HOM05D000023 ORTHO05D002750 4.1e-10 68.6 67 43.3
SHI21551 Sapria himalayana HOM05D000030 ORTHO05D002750 4.1e-10 68.6 65 47.7
SHI07150 Sapria himalayana HOM05D000023 ORTHO05D000014 5.4e-10 68.2 78 41.0
GSVIVG01032025001 Vitis vinifera HOM05D000073 ORTHO05D000033 5.4e-10 68.2 71 43.7
SHI00079 Sapria himalayana HOM05D000023 ORTHO05D002750 7.0e-10 67.8 50 56.0
SHI28174 Sapria himalayana HOM05D000105 ORTHO05D000023 9.1e-10 67.4 66 45.5
SHI23518 Sapria himalayana HOM05D000023 ORTHO05D002750 2.7e-09 65.9 66 45.5
Lj8P661T5 Lonicera japonica HOM05D000023 ORTHO05D002750 1.7e-08 63.2 65 44.6
FvH4_3g33921 Fragaria vesca HOM05D000023 ORTHO05D000014 2.2e-08 62.8 108 35.2
FvH4_5g36511 Fragaria vesca HOM05D014056 ORTHO05D022566 2.2e-08 62.8 108 35.2
FvH4_6g16931 Fragaria vesca HOM05D014056 ORTHO05D002750 2.2e-08 62.8 108 35.2
Lj2C491G6 Lonicera japonica HOM05D000023 ORTHO05D002750 2.2e-08 62.8 65 44.6
RcHm_v2.0_Chr2g0141951 Rosa chinensis HOM05D000023 ORTHO05D000014 2.2e-08 62.8 65 47.7
Lj8P655T9 Lonicera japonica HOM05D000023 ORTHO05D002750 6.5e-08 61.2 65 43.1
RcHm_v2.0_Chr1g0361961 Rosa chinensis HOM05D000023 ORTHO05D002750 6.5e-08 61.2 96 37.5
HanXRQChr13g0409081 Helianthus annuus HOM05D000023 ORTHO05D000014 8.5e-08 60.8 84 38.1
SHI17644 Sapria himalayana HOM05D000023 ORTHO05D002750 8.5e-08 60.8 75 37.3
SHI16604 Sapria himalayana HOM05D000023 ORTHO05D002750 1.1e-07 60.5 60 45.0
Lj4P320T20 Lonicera japonica HOM05D000023 ORTHO05D002750 1.5e-07 60.1 65 41.5
TWI63G1250 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.5e-07 60.1 71 42.3
FvH4_2g19761 Fragaria vesca HOM05D000023 ORTHO05D000014 3.2e-07 58.9 91 37.4
SHI09417 Sapria himalayana HOM05D000023 ORTHO05D000014 4.2e-07 58.5 62 43.5
Lj1P964T40 Lonicera japonica HOM05D000023 ORTHO05D002750 7.2e-07 57.8 50 50.0
Lj2P953T31 Lonicera japonica HOM05D000023 ORTHO05D002750 7.2e-07 57.8 50 50.0
Lj4P619T3 Lonicera japonica HOM05D000023 ORTHO05D002750 7.2e-07 57.8 50 50.0
Lj8P561T28 Lonicera japonica HOM05D000023 ORTHO05D002750 7.2e-07 57.8 50 50.0
SHI20408 Sapria himalayana HOM05D004595 ORTHO05D002750 7.2e-07 57.8 71 39.4
Atru.chr6.1476 Acer truncatum HOM05D000023 ORTHO05D002750 1.2e-06 57.0 63 39.7
Lj9P526T21 Lonicera japonica HOM05D000023 ORTHO05D002750 1.2e-06 57.0 48 50.0
SHI37574 Sapria himalayana HOM05D000023 ORTHO05D002750 1.2e-06 57.0 58 43.1
Lj2P908T13 Lonicera japonica HOM05D000023 ORTHO05D002750 1.6e-06 56.6 65 43.1
RcHm_v2.0_Chr5g0080051 Rosa chinensis HOM05D000023 ORTHO05D002750 2.7e-06 55.8 66 43.9
SHI32488 Sapria himalayana HOM05D000023 ORTHO05D002750 2.7e-06 55.8 67 35.8
SHI13516 Sapria himalayana HOM05D003135 ORTHO05D003715 8.0e-06 54.3 66 37.9
SHI20191 Sapria himalayana HOM05D001459 ORTHO05D002750 8.0e-06 54.3 66 36.4


User provided reference genes

Program Settings