Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.3e-72 275.4 136 100.0
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 7.6e-39 164.1 138 64.5
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.9e-38 161.4 139 63.3
Solyc02g069910.2 Solanum lycopersicum HOM05D005932 ORTHO05D006213 2.5e-29 132.5 104 65.4
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.5e-29 131.3 129 57.4
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 6.7e-27 124.4 129 54.3
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 8.7e-27 124.0 129 55.0
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 3.7e-25 118.6 127 54.3
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.4e-23 112.1 127 52.8
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 7.2e-21 104.4 135 49.6
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.1e-16 90.5 112 45.5
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.3e-16 88.2 136 41.9
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 2.0e-15 86.3 111 41.4
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 3.4e-15 85.5 124 41.9
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 3.4e-15 85.5 96 45.8
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 4.5e-15 85.1 129 42.6
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.0e-14 84.0 143 38.5
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.7e-14 83.2 128 43.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.2e-14 82.8 101 44.6
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 2.9e-14 82.4 114 36.8
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.9e-14 82.4 142 38.7
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 5.0e-14 81.6 115 44.3
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 5.0e-14 81.6 116 43.1
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 6.5e-14 81.3 131 38.2
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 6.5e-14 81.3 111 40.5
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 6.5e-14 81.3 108 43.5
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 6.5e-14 81.3 118 39.0
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.1e-13 80.5 110 42.7
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.4e-13 80.1 146 37.7
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.2e-13 79.0 144 39.6
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 5.5e-13 78.2 108 43.5
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 7.2e-13 77.8 113 40.7
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 7.2e-13 77.8 119 36.1
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.1e-12 76.3 112 41.1
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.7e-12 75.1 115 38.3
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.0e-11 73.9 129 38.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.4e-11 73.6 132 35.6
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.8e-11 73.2 129 36.4
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 3.0e-11 72.4 121 40.5
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 6.7e-11 71.2 123 38.2
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 6.7e-11 71.2 118 40.7
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 8.8e-11 70.9 113 38.9
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.5e-10 70.1 115 40.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.5e-10 70.1 116 37.1
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.5e-10 70.1 116 37.9
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.5e-10 70.1 115 39.1
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.0e-10 69.7 113 39.8
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.0e-10 69.7 114 39.5
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 2.0e-10 69.7 119 40.3
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 3.3e-10 68.9 120 37.5
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.4e-10 68.6 116 36.2
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 4.4e-10 68.6 119 37.0
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 9.7e-10 67.4 115 40.0
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 9.7e-10 67.4 108 36.1
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.7e-09 66.6 95 42.1
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 3.7e-09 65.5 121 35.5
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.7e-09 65.5 109 39.4
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 3.7e-09 65.5 121 34.7
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.8e-09 65.1 101 36.6
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 6.3e-09 64.7 115 37.4
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.3e-09 64.7 130 33.1
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.3e-09 64.7 113 37.2
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 8.2e-09 64.3 133 28.6
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 8.2e-09 64.3 110 40.0
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 8.2e-09 64.3 117 41.0
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.1e-08 63.9 114 35.1
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.4e-08 63.5 110 40.0
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.1e-08 62.4 135 38.5
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.1e-08 62.0 117 35.9
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 4.1e-08 62.0 107 37.4
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.3e-08 61.6 120 37.5
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 5.3e-08 61.6 120 35.8
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 5.3e-08 61.6 131 34.4
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 7.0e-08 61.2 92 42.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 7.0e-08 61.2 121 37.2
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 9.1e-08 60.8 115 37.4
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.2e-07 60.5 94 40.4
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 2.0e-07 59.7 94 39.4
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.0e-07 59.7 119 35.3
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.6e-07 59.3 111 36.9
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.6e-07 59.3 123 31.7
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 2.6e-07 59.3 114 33.3
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 4.5e-07 58.5 114 36.8
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 7.7e-07 57.8 111 31.5
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 7.7e-07 57.8 105 35.2
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.0e-06 57.4 122 32.8
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.7e-06 56.6 116 36.2
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.7e-06 56.6 116 36.2
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.7e-06 56.6 116 36.2
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 1.7e-06 56.6 111 35.1
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 2.9e-06 55.8 101 39.6
QL05p061901 Quercus lobata HOM05D005932 ORTHO05D006213 2.9e-06 55.8 39 56.4
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 3.8e-06 55.5 98 38.8
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 3.8e-06 55.5 113 36.3
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 6.5e-06 54.7 111 35.1
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.5e-06 54.7 115 33.0
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 8.5e-06 54.3 119 31.1
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 8.5e-06 54.3 117 36.8


User provided reference genes

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