Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.4e-60 236.1 124 100.0
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 4.6e-59 231.1 124 96.8
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.1e-55 219.9 124 91.9
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 4.1e-55 218.0 124 91.1
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 5.3e-55 217.6 124 91.1
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 3.4e-54 214.9 124 88.7
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 7.6e-54 213.8 124 91.9
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 3.9e-50 201.4 124 79.8
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 4.3e-49 198.0 124 79.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 4.3e-49 198.0 124 79.0
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 7.4e-49 197.2 124 78.2
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.3e-48 196.4 124 79.8
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.3e-48 196.4 124 79.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 2.2e-48 195.7 120 81.7
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 4.8e-48 194.5 124 78.2
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 1.4e-47 193.0 124 77.4
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 1.8e-47 192.6 123 76.4
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.8e-47 192.6 124 78.2
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 3.1e-47 191.8 120 80.8
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 4.1e-47 191.4 126 79.4
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 4.1e-47 191.4 123 78.0
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 5.3e-47 191.0 126 78.6
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 5.3e-47 191.0 126 78.6
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 5.3e-47 191.0 124 79.0
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 6.9e-47 190.7 122 77.9
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 9.0e-47 190.3 124 76.6
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.0e-46 189.1 124 75.0
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.0e-46 189.1 124 77.4
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 3.4e-46 188.3 122 77.9
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.3e-45 186.4 124 77.4
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.1e-44 183.3 124 72.6
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.4e-44 183.0 124 72.6
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.4e-44 183.0 122 75.4
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.9e-44 182.6 124 73.4
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.9e-44 182.6 124 72.6
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.2e-44 181.4 124 71.8
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 4.2e-44 181.4 124 72.6
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 9.4e-44 180.3 121 73.6
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 1.2e-43 179.9 118 76.3
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 1.2e-43 179.9 123 72.4
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 2.1e-43 179.1 123 73.2
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 3.6e-43 178.3 120 74.2
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 4.6e-43 177.9 123 71.5
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 6.1e-43 177.6 140 65.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.9e-43 177.2 121 72.7
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 7.9e-43 177.2 120 73.3
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.9e-43 177.2 122 70.5
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.4e-42 176.4 118 76.3
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 1.8e-42 176.0 123 71.5
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.8e-42 176.0 122 73.8
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 2.3e-42 175.6 121 71.9
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 3.0e-42 175.3 123 70.7
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 3.0e-42 175.3 155 60.0
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 3.9e-42 174.9 118 75.4
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 6.7e-42 174.1 121 71.1
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 8.8e-42 173.7 121 70.2
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 8.8e-42 173.7 121 72.7
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 1.1e-41 173.3 123 69.1
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 4.3e-41 171.4 125 69.6
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 5.7e-41 171.0 124 67.7
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 9.7e-41 170.2 117 68.4
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 9.7e-41 170.2 122 68.0
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 9.7e-41 170.2 125 68.0
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 9.7e-41 170.2 122 69.7
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 1.3e-40 169.9 124 67.7
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.3e-40 169.9 117 68.4
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.3e-40 169.9 116 69.0
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 1.7e-40 169.5 116 69.0
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 1.7e-40 169.5 116 69.0
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 1.7e-40 169.5 116 69.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.7e-40 169.5 124 68.5
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.2e-40 169.1 122 68.0
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.2e-40 169.1 122 68.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 8.2e-40 167.2 117 65.8
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.1e-39 166.8 122 67.2
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.1e-39 166.8 116 68.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 1.1e-39 166.8 123 67.5
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.1e-39 166.8 122 68.9
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 6.9e-39 164.1 122 64.8
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 3.4e-38 161.8 123 66.7
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 3.4e-38 161.8 122 67.2
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 4.5e-38 161.4 124 62.9
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 5.9e-38 161.0 123 62.6
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 1.4e-36 156.4 117 63.2
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.9e-36 156.0 108 70.4
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 3.2e-36 155.2 120 65.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 7.9e-35 150.6 90 85.6
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.3e-34 149.1 102 68.6
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 8.8e-34 147.1 101 70.3
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 2.0e-33 146.0 121 57.9
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 5.7e-33 144.4 112 60.7
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 7.4e-33 144.1 89 80.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.8e-32 142.1 115 61.7
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 1.1e-31 140.2 93 78.5
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 2.4e-31 139.0 171 45.6
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.0e-29 133.7 89 76.4
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.3e-29 133.3 89 76.4
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 2.9e-29 132.1 90 72.2
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 5.0e-29 131.3 87 70.1
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 6.5e-29 131.0 100 65.0
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 8.5e-29 130.6 95 72.6
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.9e-28 129.4 89 74.2
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 2.7e-27 125.6 89 69.7
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 3.6e-27 125.2 124 54.0
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 5.7e-25 117.9 118 50.8
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.3e-24 116.7 81 69.1
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 1.4e-23 113.2 97 57.7
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 9.1e-23 110.5 121 49.6
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.2e-22 110.2 119 45.4
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.7e-21 106.3 124 42.7
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 5.5e-20 101.3 85 57.6
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 5.2e-18 94.7 54 79.6
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 8.8e-10 67.4 120 37.5


User provided reference genes

Program Settings