Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 5.6e-54 214.2 119 100.0
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 2.2e-50 202.2 120 94.2
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 3.6e-45 184.9 119 84.0
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 6.2e-45 184.1 119 85.7
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.1e-44 183.3 126 84.9
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 1.8e-44 182.6 119 84.9
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 2.4e-44 182.2 119 84.0
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 7.9e-32 140.6 119 68.9
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.0e-31 140.2 120 64.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.3e-31 139.8 125 69.6
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 1.3e-31 139.8 123 66.7
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 5.1e-31 137.9 128 68.0
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 3.3e-30 135.2 121 66.9
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 5.7e-30 134.4 122 67.2
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 9.6e-30 133.7 128 63.3
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 9.6e-30 133.7 120 66.7
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.3e-29 133.3 119 63.9
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.6e-29 132.9 120 68.3
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 2.1e-29 132.5 121 67.8
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 2.8e-29 132.1 116 65.5
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 6.2e-29 131.0 123 59.3
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 6.2e-29 131.0 130 63.1
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 8.2e-29 130.6 123 65.9
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 1.1e-28 130.2 123 65.0
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 1.8e-28 129.4 122 62.3
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.8e-28 129.4 122 63.9
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 2.4e-28 129.0 124 60.5
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.4e-28 129.0 123 62.6
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 3.1e-28 128.6 127 62.2
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 3.1e-28 128.6 122 63.9
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.1e-28 128.6 126 65.1
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 3.1e-28 128.6 121 63.6
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 5.3e-28 127.9 130 63.8
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 9.0e-28 127.1 131 62.6
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 9.0e-28 127.1 121 66.1
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 9.0e-28 127.1 119 60.5
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 2.0e-27 125.9 120 62.5
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.0e-27 125.9 133 59.4
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 3.4e-27 125.2 128 58.6
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 3.4e-27 125.2 119 62.2
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 3.4e-27 125.2 122 65.6
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.4e-27 125.2 120 62.5
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 3.4e-27 125.2 119 61.3
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 4.5e-27 124.8 127 63.0
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 5.8e-27 124.4 123 62.6
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 1.0e-26 123.6 119 63.0
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 1.3e-26 123.2 119 62.2
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.3e-26 123.2 121 62.0
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 1.3e-26 123.2 121 62.0
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 2.2e-26 122.5 119 62.2
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 2.2e-26 122.5 116 58.6
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 2.9e-26 122.1 135 54.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 3.8e-26 121.7 119 63.9
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 5.0e-26 121.3 119 59.7
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 5.0e-26 121.3 119 63.0
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 6.5e-26 120.9 121 57.0
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 6.5e-26 120.9 120 59.2
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 6.5e-26 120.9 120 59.2
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 8.4e-26 120.6 126 65.1
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 1.1e-25 120.2 119 59.7
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.4e-25 119.8 126 64.3
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 1.9e-25 119.4 120 61.7
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 2.5e-25 119.0 127 61.4
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 2.5e-25 119.0 141 56.7
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 3.2e-25 118.6 119 62.2
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 3.2e-25 118.6 119 55.5
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 4.2e-25 118.2 130 59.2
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 5.5e-25 117.9 119 62.2
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 5.5e-25 117.9 119 62.2
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 5.5e-25 117.9 130 60.0
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 7.2e-25 117.5 117 61.5
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.6e-24 116.3 126 60.3
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 2.7e-24 115.5 121 66.1
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 3.5e-24 115.2 129 55.8
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 6.1e-24 114.4 126 58.7
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 1.0e-23 113.6 124 54.8
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 1.3e-23 113.2 119 55.5
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 3.0e-23 112.1 130 56.9
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 1.9e-22 109.4 127 59.8
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 4.3e-22 108.2 119 58.8
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 5.7e-22 107.8 78 73.1
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.6e-21 106.3 125 56.0
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 1.1e-20 103.6 128 55.5
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 3.1e-20 102.1 112 61.6
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 9.0e-20 100.5 122 57.4
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.2e-19 100.1 121 52.9
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 3.4e-19 98.6 121 52.1
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 5.9e-19 97.8 128 48.4
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.2e-17 92.0 65 73.8
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 5.5e-17 91.3 102 52.9
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 9.4e-17 90.5 119 47.9
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 1.1e-14 83.6 133 41.4
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 2.0e-14 82.8 119 49.6
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 2.8e-13 79.0 110 45.5
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 6.3e-13 77.8 41 85.4
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 3.2e-09 65.5 47 66.0
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 4.2e-09 65.1 70 50.0
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 1.4e-07 60.1 120 40.8


User provided reference genes

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