Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.9e-83 312.8 190 100.0
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.5e-80 302.4 190 97.9
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 6.8e-70 267.7 191 87.4
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 4.4e-69 265.0 191 86.9
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 4.4e-69 265.0 191 86.9
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 5.8e-69 264.6 190 87.9
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 6.4e-68 261.2 191 85.9
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 9.6e-64 247.3 191 80.6
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 4.6e-58 228.4 190 77.9
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 5.1e-57 224.9 190 76.3
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 2.5e-56 222.6 189 76.2
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 8.1e-55 217.6 190 76.3
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.1e-54 217.2 190 76.8
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 2.4e-54 216.1 191 74.3
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 3.1e-54 215.7 196 72.4
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 4.0e-54 215.3 198 73.7
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 4.0e-54 215.3 192 76.0
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 5.3e-54 214.9 191 73.3
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 5.3e-54 214.9 177 78.0
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 6.9e-54 214.5 175 76.6
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 2.0e-53 213.0 156 87.8
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 2.6e-53 212.6 191 73.8
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 3.4e-53 212.2 198 73.7
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 7.6e-53 211.1 192 71.9
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 7.6e-53 211.1 190 72.6
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 1.3e-52 210.3 177 74.0
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 1.3e-52 210.3 192 74.5
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 1.3e-52 210.3 191 70.7
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.3e-52 210.3 194 74.7
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.3e-52 210.3 190 72.6
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 1.3e-52 210.3 190 72.6
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.7e-52 209.9 196 71.9
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.2e-52 209.5 196 70.9
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 3.8e-52 208.8 147 91.2
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 6.4e-52 208.0 191 72.3
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 8.4e-52 207.6 189 72.0
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 1.9e-51 206.5 223 64.6
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.2e-50 203.8 164 78.7
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 2.7e-50 202.6 155 82.6
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 3.5e-50 202.2 178 73.0
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 7.9e-50 201.1 178 75.3
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 1.0e-49 200.7 149 86.6
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.0e-49 200.7 184 70.7
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 1.0e-49 200.7 154 82.5
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.7e-49 199.9 151 86.1
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 1.7e-49 199.9 175 77.1
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 1.7e-49 199.9 189 69.3
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 2.3e-49 199.5 193 68.9
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 3.0e-49 199.1 172 75.0
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 3.9e-49 198.7 179 76.0
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.9e-49 198.7 175 75.4
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 5.1e-49 198.4 165 79.4
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 6.6e-49 198.0 194 70.1
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 8.7e-49 197.6 190 69.5
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 8.7e-49 197.6 178 74.7
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 8.7e-49 197.6 175 74.9
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.1e-48 197.2 175 76.0
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.1e-48 197.2 175 76.0
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 1.1e-48 197.2 175 76.0
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 1.9e-48 196.4 190 68.9
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 2.5e-48 196.1 191 69.1
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 2.5e-48 196.1 175 76.0
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.3e-48 195.7 189 69.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 7.3e-48 194.5 174 75.9
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 7.3e-48 194.5 191 68.1
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 9.6e-48 194.1 175 74.3
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 9.6e-48 194.1 155 81.3
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 1.3e-47 193.7 174 74.1
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 2.1e-47 193.0 156 78.8
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 2.1e-47 193.0 190 67.4
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.8e-47 192.6 175 73.7
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 3.6e-47 192.2 174 74.1
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 3.6e-47 192.2 174 74.1
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 3.6e-47 192.2 175 72.6
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 4.8e-47 191.8 196 68.4
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 6.2e-47 191.4 188 68.1
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 6.2e-47 191.4 190 70.0
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 8.1e-47 191.0 174 73.6
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 1.1e-46 190.7 174 73.6
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 1.4e-46 190.3 174 73.0
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.4e-46 190.3 188 66.0
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.8e-46 189.9 174 74.7
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 4.0e-46 188.7 149 82.6
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 5.3e-46 188.3 174 73.0
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 5.3e-46 188.3 195 69.2
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 6.9e-46 188.0 148 81.8
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 9.0e-46 187.6 164 76.2
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 1.2e-45 187.2 174 73.0
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 1.5e-45 186.8 158 75.3
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 9.9e-45 184.1 166 71.7
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.3e-44 183.7 150 79.3
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.3e-44 183.7 190 65.8
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 2.2e-44 183.0 190 63.7
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 2.9e-44 182.6 191 67.0
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.4e-44 181.4 172 69.2
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 5.5e-43 178.3 181 68.5
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 7.1e-43 177.9 174 70.1
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 7.1e-43 177.9 174 70.1
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 9.3e-43 177.6 176 68.8
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.7e-42 176.0 174 68.4
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 2.3e-41 172.9 181 68.0
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 8.7e-41 171.0 155 74.2
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 6.2e-39 164.9 177 64.4
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 1.2e-37 160.6 134 80.6
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 6.5e-36 154.8 173 61.3
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 3.5e-34 149.1 190 58.4
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.8e-31 139.4 175 59.4
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.4e-27 127.1 101 65.3
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 5.5e-27 125.2 161 57.8
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 1.6e-26 123.6 156 59.6
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.1e-22 110.9 164 56.1
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 5.3e-22 108.6 159 54.7
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 5.9e-21 105.1 124 54.0
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 7.7e-21 104.8 150 54.7
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 2.2e-20 103.2 140 60.0
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.9e-19 100.1 112 65.2
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 3.2e-19 99.4 155 52.3
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.2e-18 97.4 110 60.9
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 7.9e-18 94.7 71 64.8
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 3.4e-13 79.3 123 49.6
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 9.4e-11 71.2 74 47.3
Nitab4.5_0006079g0040 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.7e-07 60.5 45 84.4


User provided reference genes

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