Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.9e-190 669.1 355 100.0
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.6e-184 649.4 355 97.2
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 2.0e-171 605.9 355 90.1
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 9.8e-171 603.6 355 90.1
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.7e-170 602.8 355 89.9
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.4e-169 599.7 352 89.5
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.4e-169 599.0 351 90.3
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.1e-156 557.0 356 81.5
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.3e-154 550.1 357 81.5
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.2e-152 543.5 356 80.3
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 6.0e-152 541.2 356 78.4
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 1.7e-151 539.7 356 78.7
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 5.1e-151 538.1 357 80.4
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 8.6e-151 537.3 351 80.3
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.1e-149 532.7 332 82.8
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 1.1e-148 530.4 333 82.3
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.5e-147 526.6 333 80.5
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 5.8e-147 524.6 356 76.7
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.3e-146 523.5 332 80.1
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.4e-146 521.2 362 76.2
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.1e-145 520.4 348 78.4
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.2e-145 518.8 355 76.9
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.2e-144 516.9 362 75.1
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.6e-144 516.5 362 74.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.6e-144 516.5 332 79.8
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.7e-144 515.8 362 74.9
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 3.5e-144 515.4 333 80.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 4.6e-144 515.0 333 79.6
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.0e-143 513.8 331 79.2
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 1.0e-143 513.8 349 76.2
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 2.3e-143 512.7 369 74.3
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 5.1e-143 511.5 333 78.4
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 1.1e-142 510.4 333 79.3
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.5e-142 510.0 333 80.2
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 3.3e-142 508.8 333 79.3
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 3.3e-142 508.8 355 74.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.3e-142 508.8 333 79.3
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 3.3e-142 508.8 333 79.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.3e-142 508.4 362 73.8
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.6e-141 506.5 333 79.0
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 2.1e-141 506.1 348 76.4
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.1e-140 502.3 356 73.9
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 3.1e-140 502.3 333 77.2
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 6.9e-140 501.1 333 77.2
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 6.9e-140 501.1 332 77.1
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.0e-139 499.6 333 76.9
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 4.4e-139 498.4 334 78.1
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 4.4e-139 498.4 358 75.1
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 7.6e-139 497.7 338 76.6
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.9e-138 495.7 356 73.0
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.9e-138 495.7 336 75.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 4.9e-138 495.0 348 76.7
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.1e-137 493.8 363 74.4
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.4e-137 493.4 365 72.6
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.9e-137 493.0 358 73.5
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.9e-137 493.0 346 73.7
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 1.9e-137 493.0 348 75.6
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.9e-137 493.0 336 75.3
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.2e-137 491.9 346 73.7
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 4.2e-137 491.9 345 74.2
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 4.2e-137 491.9 341 75.4
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 4.2e-137 491.9 365 72.3
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 5.4e-137 491.5 346 73.4
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 9.3e-137 490.7 335 78.5
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 1.2e-136 490.3 341 75.1
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 2.3e-135 486.1 343 73.2
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 3.0e-135 485.7 343 74.3
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 8.7e-135 484.2 333 74.5
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 1.5e-134 483.4 335 77.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 4.3e-134 481.9 332 76.8
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 4.3e-134 481.9 335 76.4
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 4.8e-133 478.4 341 71.8
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 9.0e-132 474.2 335 73.7
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.5e-131 471.9 347 70.9
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 7.6e-131 471.1 342 73.7
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.2e-130 469.5 348 71.8
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 3.8e-130 468.8 347 70.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 4.9e-130 468.4 347 70.9
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 4.9e-130 468.4 347 70.9
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 4.9e-130 468.4 347 70.9
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 8.4e-130 467.6 346 71.1
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 8.4e-130 467.6 347 70.6
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 9.3e-129 464.2 333 73.0
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.8e-127 459.9 358 71.2
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.1e-126 457.2 299 79.9
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 2.5e-126 456.1 330 70.3
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 3.3e-126 455.7 340 71.5
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.2e-122 443.0 270 82.2
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 3.2e-121 439.1 270 81.9
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 2.0e-107 393.3 356 61.8
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.0e-106 391.0 343 57.1
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 7.2e-105 384.8 353 56.4
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 9.4e-105 384.4 338 60.4
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.6e-104 383.6 289 70.6
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 9.1e-100 367.9 265 74.7
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.0e-86 323.6 381 52.2
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.4e-76 290.8 242 62.8
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 7.7e-75 285.0 273 57.9
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 6.5e-74 282.0 349 46.1
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.7e-72 276.6 229 67.7
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 6.3e-69 265.4 331 47.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 6.6e-66 255.4 309 48.9
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.7e-64 249.2 151 81.5
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 2.6e-62 243.4 182 70.3
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.7e-61 240.7 332 43.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 2.4e-60 236.9 332 47.0
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.1e-60 236.1 193 64.8
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.6e-54 216.9 186 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 1.9e-49 200.7 198 52.0
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 3.6e-48 196.4 140 75.0
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 7.8e-43 178.7 134 67.9
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.1e-39 168.3 135 66.7
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 5.2e-39 166.0 265 40.8
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.4e-38 162.9 91 89.0
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.0e-26 125.2 138 60.1
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 3.0e-26 123.6 131 48.9
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 9.6e-25 118.6 66 87.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.9e-21 107.1 57 91.2
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.5e-17 94.7 89 55.1
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.2e-13 80.9 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 6.4e-13 79.3 46 84.8


User provided reference genes

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