Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 9.9e-211 736.5 361 100.0
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 5.4e-193 677.6 352 95.2
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.0e-175 620.2 361 84.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 2.8e-173 612.1 361 83.7
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 3.8e-170 601.7 361 82.3
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.9e-169 599.4 361 82.5
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 4.5e-131 471.9 346 65.0
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 6.5e-130 468.0 349 63.6
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 6.8e-127 458.0 348 65.2
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 2.6e-126 456.1 353 61.5
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 5.7e-126 454.9 348 63.5
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 7.5e-126 454.5 348 63.5
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 9.8e-126 454.1 346 63.6
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.1e-124 450.7 349 63.3
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.4e-124 449.5 348 63.8
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.1e-124 449.1 346 63.0
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 4.1e-124 448.7 348 62.6
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 9.2e-124 447.6 349 62.8
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 9.2e-124 447.6 348 64.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 9.2e-124 447.6 348 62.1
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 9.2e-124 447.6 346 63.0
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 9.2e-124 447.6 348 63.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 1.2e-123 447.2 348 63.2
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 5.9e-123 444.9 348 61.8
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.9e-121 439.9 371 58.8
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.6e-120 436.8 352 60.8
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.6e-120 435.6 331 64.7
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.8e-119 433.3 354 60.2
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 2.3e-119 433.0 347 61.1
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.0e-119 432.2 346 61.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 5.2e-119 431.8 352 60.8
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.0e-118 429.9 357 58.3
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 3.4e-118 429.1 334 62.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 3.4e-118 429.1 334 62.0
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 3.4e-118 429.1 349 61.6
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 4.4e-118 428.7 346 59.8
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.7e-117 426.8 348 58.0
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.7e-117 426.8 350 58.3
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.2e-117 426.4 357 58.0
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.2e-117 426.4 347 60.8
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 3.7e-117 425.6 364 58.2
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 3.7e-117 425.6 360 58.9
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.4e-116 423.7 348 59.5
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 4.1e-116 422.2 348 61.5
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.2e-115 420.6 348 57.2
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.5e-115 419.1 348 58.3
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 4.6e-115 418.7 348 58.3
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 5.9e-115 418.3 345 60.0
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 3.0e-114 416.0 348 56.6
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 3.9e-114 415.6 348 58.6
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.9e-113 413.3 345 60.3
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 5.6e-113 411.8 339 59.6
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 7.3e-113 411.4 356 56.7
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 9.5e-113 411.0 332 59.9
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.6e-112 410.2 331 58.9
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.1e-112 409.8 349 59.0
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 4.7e-112 408.7 346 55.2
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.4e-111 407.1 327 59.9
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.8e-111 406.8 348 56.9
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 6.8e-111 404.8 315 64.8
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 8.9e-111 404.4 347 55.3
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.2e-110 404.1 349 56.7
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 5.8e-110 401.7 348 56.0
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.3e-109 400.6 348 58.0
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.3e-109 400.6 323 58.8
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 2.2e-109 399.8 346 54.6
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 2.2e-109 399.8 346 54.6
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 6.4e-109 398.3 349 56.7
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.3e-109 397.9 362 55.8
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.1e-108 397.5 346 54.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 3.2e-108 396.0 348 56.6
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 4.1e-108 395.6 363 51.8
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 5.4e-108 395.2 348 54.6
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 7.0e-108 394.8 348 54.3
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 7.0e-108 394.8 345 58.0
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.0e-107 393.3 377 52.0
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 3.5e-107 392.5 267 75.7
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 6.0e-107 391.7 348 54.3
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 8.6e-106 387.9 346 55.8
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 1.5e-105 387.1 339 57.2
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 1.9e-105 386.7 370 51.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 9.5e-105 384.4 345 57.1
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.6e-102 376.3 324 59.0
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.9e-101 372.9 278 63.3
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.1e-99 366.7 343 54.2
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.3e-98 364.0 275 66.5
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.0e-98 362.8 255 69.4
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.1e-98 362.1 252 69.8
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 3.3e-97 359.4 345 53.9
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 4.6e-91 339.0 346 50.0
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 4.6e-91 339.0 314 57.3
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 5.1e-90 335.5 324 51.9
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 6.6e-90 335.1 343 50.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 8.6e-90 334.7 351 52.4
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 4.0e-87 325.9 345 50.7
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 7.6e-86 321.6 311 54.7
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 8.4e-85 318.2 349 47.0
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.9e-81 307.0 287 56.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.8e-80 303.1 241 59.8
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 4.2e-76 289.3 261 55.2
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.1e-67 260.4 313 46.6
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.3e-66 257.7 236 53.0
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.6e-64 250.8 210 60.0
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.5e-62 244.2 185 55.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 2.0e-62 243.8 357 38.9
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.2e-61 240.4 218 57.8
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 2.8e-56 223.4 246 50.8
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.1e-44 184.9 130 60.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.8e-39 167.5 127 61.4
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.2e-35 154.8 308 35.7
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 4.1e-31 139.8 100 64.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 2.9e-29 133.7 144 47.2
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 8.8e-26 122.1 189 39.2
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 1.7e-16 91.3 73 56.2
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 3.1e-15 87.0 198 31.8
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.3e-13 81.6 70 54.3
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 7.2e-12 75.9 83 50.6


User provided reference genes

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