Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004585g0030 Nicotiana tabacum HOM05D000839 ORTHO05D011522 7.1e-56 220.3 108 100.0
Peaxi162Scf00451g00332 Petunia axillaris HOM05D000839 ORTHO05D000664 1.1e-08 63.5 35 91.4
Peaxi162Scf01366g00023 Petunia axillaris HOM05D000839 ORTHO05D000664 5.5e-08 61.2 35 88.6
PGSC0003DMG400036598 Solanum tuberosum HOM05D000839 ORTHO05D000664 5.5e-08 61.2 35 88.6
Nitab4.5_0004585g0080 Nicotiana tabacum HOM05D000839 ORTHO05D000664 7.2e-08 60.8 37 83.8
Nn2g11250 Nelumbo nucifera HOM05D000839 ORTHO05D000664 9.4e-08 60.5 37 75.7
Nitab4.5_0002781g0090 Nicotiana tabacum HOM05D000839 ORTHO05D000664 9.4e-08 60.5 36 86.1
Aqoxy2G04018 Aquilegia oxysepala HOM05D000839 ORTHO05D000664 1.6e-07 59.7 37 73.0
CAN.G514.10 Capsicum annuum HOM05D000351 ORTHO05D000250 2.1e-07 59.3 27 85.2
Sopen08g023650 Solanum pennellii HOM05D000351 ORTHO05D000250 2.1e-07 59.3 27 85.2
TAR627G0676 Trochodendron aralioides HOM05D000839 ORTHO05D000664 2.7e-07 58.9 35 77.1
Nn7g38382 Nelumbo nucifera HOM05D000839 ORTHO05D000664 3.6e-07 58.5 35 77.1
Nitab4.5_0000161g0180 Nicotiana tabacum HOM05D000839 ORTHO05D000664 3.6e-07 58.5 37 75.7
Nitab4.5_0000309g0130 Nicotiana tabacum HOM05D000839 ORTHO05D000664 3.6e-07 58.5 36 83.3
PSO170G6772 Papaver somniferum HOM05D000839 ORTHO05D000664 3.6e-07 58.5 35 77.1
MBI18_g27543_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 4.7e-07 58.2 37 73.0
Manes.16G046838 Manihot esculenta HOM05D000839 ORTHO05D000664 4.7e-07 58.2 35 77.1
Nitab4.5_0000161g0100 Nicotiana tabacum HOM05D000839 ORTHO05D000664 4.7e-07 58.2 37 73.0
Nitab4.5_0007578g0010 Nicotiana tabacum HOM05D000839 ORTHO05D000664 4.7e-07 58.2 37 73.0
Peaxi162Scf00423g00074 Petunia axillaris HOM05D000839 ORTHO05D000664 4.7e-07 58.2 35 74.3
CSS0035604 Camellia sinensis var. sinensis HOM05D000839 ORTHO05D000664 6.1e-07 57.8 35 74.3
DCAR_009662 Daucus carota HOM05D000839 ORTHO05D000664 6.1e-07 57.8 66 48.5
Nitab4.5_0000351g0290 Nicotiana tabacum HOM05D000839 ORTHO05D000664 6.1e-07 57.8 37 73.0
Nitab4.5_0006127g0010 Nicotiana tabacum HOM05D000351 ORTHO05D000250 6.1e-07 57.8 54 55.6
Nitab4.5_0024628g0010 Nicotiana tabacum HOM05D000839 ORTHO05D000664 6.1e-07 57.8 37 73.0
Nitab4.5_0025374g0010 Nicotiana tabacum HOM05D000839 ORTHO05D000664 6.1e-07 57.8 37 73.0
Atru.chr1.49 Acer truncatum HOM05D000839 ORTHO05D000664 8.0e-07 57.4 35 74.3
CSS0006227 Camellia sinensis var. sinensis HOM05D000839 ORTHO05D000664 8.0e-07 57.4 38 68.4
Ciclev10004786m.g Citrus clementina HOM05D000839 ORTHO05D000664 8.0e-07 57.4 35 74.3
Lj3g0012294 Lotus japonicus HOM05D000839 ORTHO05D000664 8.0e-07 57.4 37 78.4
Medtr8g447340 Medicago truncatula HOM05D000839 ORTHO05D000664 8.0e-07 57.4 35 82.9
Solyc08g075030.3 Solanum lycopersicum HOM05D000351 ORTHO05D000250 8.0e-07 57.4 27 81.5
PGSC0003DMG400025540 Solanum tuberosum HOM05D000351 ORTHO05D000250 8.0e-07 57.4 27 85.2
CANSAT56G3266 Cannabis sativa HOM05D000839 ORTHO05D000664 1.0e-06 57.0 35 74.3
CDE01G0439 Ceratophyllum demersum HOM05D000839 ORTHO05D000664 1.0e-06 57.0 35 71.4
MBI18_g30532_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 1.0e-06 57.0 37 73.0
Nitab4.5_0013200g0020 Nicotiana tabacum HOM05D000351 ORTHO05D011522 1.0e-06 57.0 46 58.7
PSO210G2324 Papaver somniferum HOM05D000839 ORTHO05D000664 1.0e-06 57.0 35 74.3
QL04p094449 Quercus lobata HOM05D000839 ORTHO05D000664 1.0e-06 57.0 35 77.1
QL04p094504 Quercus lobata HOM05D000839 ORTHO05D000664 1.0e-06 57.0 35 77.1
Atru.chr1.48 Acer truncatum HOM05D000839 ORTHO05D000664 1.4e-06 56.6 35 74.3
Aa31LG6G2030 Aethionema arabicum HOM05D000351 ORTHO05D000250 1.8e-06 56.2 57 54.4
CANSAT56G3009 Cannabis sativa HOM05D000839 ORTHO05D000664 1.8e-06 56.2 35 74.3
CDE12G0381 Ceratophyllum demersum HOM05D000839 ORTHO05D000664 1.8e-06 56.2 35 68.6
FvH4_3g14010 Fragaria vesca HOM05D000839 ORTHO05D000664 1.8e-06 56.2 37 67.6
FAN11G4010 Fragaria x ananassa HOM05D000839 ORTHO05D000664 1.8e-06 56.2 37 67.6
FAN16G3593 Fragaria x ananassa HOM05D001289 ORTHO05D000664 1.8e-06 56.2 37 67.6
FAN21G2673 Fragaria x ananassa HOM05D000839 ORTHO05D000664 1.8e-06 56.2 37 67.6
FAN25G2500 Fragaria x ananassa HOM05D000839 ORTHO05D000664 1.8e-06 56.2 37 67.6
Nitab4.5_0027059g0010 Nicotiana tabacum HOM05D000351 ORTHO05D000250 1.8e-06 56.2 46 54.3
PSO339G2562 Papaver somniferum HOM05D000839 ORTHO05D000664 1.8e-06 56.2 35 74.3
Peaxi162Scf00206g01114 Petunia axillaris HOM05D000351 ORTHO05D000250 1.8e-06 56.2 27 81.5
Thecc.07G192300 Theobroma cacao HOM05D000839 ORTHO05D000664 1.8e-06 56.2 35 74.3
CSS0001674 Camellia sinensis var. sinensis HOM05D000839 ORTHO05D000664 2.3e-06 55.8 34 70.6
CAN.G1310.10 Capsicum annuum HOM05D000839 ORTHO05D000664 2.3e-06 55.8 37 70.3
Ca_29682_v3 Cicer arietinum L. HOM05D000839 ORTHO05D000664 2.3e-06 55.8 37 73.0
MBI18_g27536_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 2.3e-06 55.8 37 70.3
Nitab4.5_0006746g0020 Nicotiana tabacum HOM05D000351 ORTHO05D011522 2.3e-06 55.8 51 47.1
Psat4g170600 Pisum sativum HOM05D000839 ORTHO05D000664 2.3e-06 55.8 35 77.1
Sabra10G0134300 Salix brachista HOM05D000839 ORTHO05D000664 2.3e-06 55.8 35 74.3
AL7G34690 Arabidopsis lyrata HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
AT4G19420 Arabidopsis thaliana HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
BcaC01g00614 Brassica carinata HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
C03p81930 Brassica napus HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
BolC3t20470H Brassica oleracea HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
BraA08t33424Z Brassica rapa HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
Migut.M01500 Erythranthe guttata HOM05D000839 ORTHO05D000664 3.0e-06 55.5 36 69.4
Thhalv10025385m.g Eutrema salsugineum HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
Oeu029452.1 Olea europaea HOM05D000839 ORTHO05D000664 3.0e-06 55.5 35 71.4
Potri.016G039000 Populus trichocarpa HOM05D000839 ORTHO05D000664 3.0e-06 55.5 42 61.9
Sp7g18040 Schrenkiella parvula HOM05D000351 ORTHO05D000250 3.0e-06 55.5 38 63.2
TPR.G30314 Trifolium pratense HOM05D000351 ORTHO05D000250 3.0e-06 55.5 26 76.9
TWI59G0373 Tripterygium wilfordii HOM05D000839 ORTHO05D000664 3.0e-06 55.5 35 68.6
CAN.G22.23 Capsicum annuum HOM05D000351 ORTHO05D000250 4.0e-06 55.1 27 74.1
CAN.G294.12 Capsicum annuum HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 71.4
Cpa.g.sc920.1 Carica papaya HOM05D000351 ORTHO05D000250 4.0e-06 55.1 27 74.1
CiPaw.15G113200 Carya illinoinensis HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 71.4
Peaxi162Scf00006g00191 Petunia axillaris HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 68.6
Peaxi162Scf00368g00614 Petunia axillaris HOM05D000351 ORTHO05D000250 4.0e-06 55.1 27 81.5
Peaxi162Scf00943g00015 Petunia axillaris HOM05D000351 ORTHO05D000250 4.0e-06 55.1 62 45.2
Rhsim01G0077200 Rhododendron simsii HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 71.4
Rhsim01G0077300 Rhododendron simsii HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 71.4
Solyc05g053860.4 Solanum lycopersicum HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 71.4
Solyc08g074950.2 Solanum lycopersicum HOM05D000351 ORTHO05D000250 4.0e-06 55.1 27 81.5
Sopen12g008160 Solanum pennellii HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 68.6
PGSC0003DMG400009659 Solanum tuberosum HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 68.6
GSVIVG01036714001 Vitis vinifera HOM05D000839 ORTHO05D000664 4.0e-06 55.1 35 71.4
A08p14320 Brassica napus HOM05D000351 ORTHO05D000250 5.2e-06 54.7 38 60.5
CARHR226210 Cardamine hirsuta HOM05D000351 ORTHO05D000250 5.2e-06 54.7 53 50.9
Eucgr.D02577 Eucalyptus grandis HOM05D000351 ORTHO05D000250 5.2e-06 54.7 39 59.0
MD06G1012900 Malus domestica HOM05D000351 ORTHO05D000250 5.2e-06 54.7 27 70.4
Nitab4.5_0002761g0020 Nicotiana tabacum HOM05D000839 ORTHO05D000664 5.2e-06 54.7 35 74.3
Nitab4.5_0008355g0010 Nicotiana tabacum HOM05D000839 ORTHO05D000664 5.2e-06 54.7 35 74.3
Peaxi162Scf00206g00125 Petunia axillaris HOM05D000351 ORTHO05D000250 5.2e-06 54.7 27 77.8
Peaxi162Scf00548g00321 Petunia axillaris HOM05D000351 ORTHO05D000250 5.2e-06 54.7 27 81.5
THA.LOC104806206 Tarenaya hassleriana HOM05D000351 ORTHO05D000250 5.2e-06 54.7 44 52.3
VMungo1309G2712 Vigna mungo HOM05D000839 ORTHO05D000664 5.2e-06 54.7 35 77.1
CDE02G4440 Ceratophyllum demersum HOM05D000351 ORTHO05D000250 6.7e-06 54.3 38 55.3
Eucgr.F04367 Eucalyptus grandis HOM05D000839 ORTHO05D000664 6.7e-06 54.3 35 71.4
Thhalv10018401m.g Eutrema salsugineum HOM05D000839 ORTHO05D000664 6.7e-06 54.3 35 71.4
Gohir.D08G168700 Gossypium hirsutum HOM05D000351 ORTHO05D000250 6.7e-06 54.3 27 74.1
Gorai.004G175900 Gossypium raimondii HOM05D000351 ORTHO05D000250 6.7e-06 54.3 27 74.1
Nn1g09244 Nelumbo nucifera HOM05D000351 ORTHO05D000250 6.7e-06 54.3 40 55.0
Prupe.4G127800 Prunus persica HOM05D000839 ORTHO05D000664 6.7e-06 54.3 35 74.3
QL04p094361 Quercus lobata HOM05D000839 ORTHO05D000664 6.7e-06 54.3 35 71.4
Solyc08g074990.3 Solanum lycopersicum HOM05D000351 ORTHO05D000250 6.7e-06 54.3 27 81.5
Sopen05g032330 Solanum pennellii HOM05D000839 ORTHO05D000664 6.7e-06 54.3 35 71.4
SGA_v2.0_scaffold472G52095 Striga asiatica HOM05D000839 ORTHO05D000664 6.7e-06 54.3 35 65.7
Duzib213G0165 Durio zibethinus HOM05D000839 ORTHO05D000664 8.8e-06 53.9 35 68.6
Lj2g0021749 Lotus japonicus HOM05D000351 ORTHO05D000250 8.8e-06 53.9 36 61.1
Manes.17G001600 Manihot esculenta HOM05D000351 ORTHO05D000250 8.8e-06 53.9 36 63.9
Nn3g19174 Nelumbo nucifera HOM05D000351 ORTHO05D000250 8.8e-06 53.9 38 60.5
Nitab4.5_0000018g0120 Nicotiana tabacum HOM05D000351 ORTHO05D000250 8.8e-06 53.9 53 50.9
Nitab4.5_0003422g0020 Nicotiana tabacum HOM05D000351 ORTHO05D000250 8.8e-06 53.9 27 85.2
Peaxi162Scf01366g00022 Petunia axillaris HOM05D000839 ORTHO05D000664 8.8e-06 53.9 35 74.3
Solyc08g075050.3 Solanum lycopersicum HOM05D000351 ORTHO05D000250 8.8e-06 53.9 31 71.0
PGSC0003DMG400005363 Solanum tuberosum HOM05D000351 ORTHO05D000250 8.8e-06 53.9 27 81.5
PGSC0003DMG400015764 Solanum tuberosum HOM05D000839 ORTHO05D000664 8.8e-06 53.9 35 71.4
TPR.G16820 Trifolium pratense HOM05D000351 ORTHO05D000250 8.8e-06 53.9 72 41.7


User provided reference genes

Program Settings