Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.6e-277 957.6 477 100.0
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 9.2e-273 943.0 477 98.5
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 1.3e-258 896.0 477 92.2
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 2.4e-257 891.7 477 92.0
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 7.1e-257 890.2 477 92.0
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 2.1e-213 745.7 460 78.9
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 4.8e-213 744.6 462 79.2
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 1.1e-212 743.4 458 79.7
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 8.4e-210 733.8 464 78.9
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 3.2e-209 731.9 473 77.4
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 7.2e-209 730.7 472 79.7
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 2.7e-208 728.8 461 78.7
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 6.1e-208 727.6 456 78.5
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 3.0e-207 725.3 447 79.0
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 6.7e-207 724.2 462 75.3
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 4.3e-206 721.5 478 76.8
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 5.7e-206 721.1 453 76.2
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 2.8e-205 718.8 467 76.0
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 3.7e-205 718.4 455 78.5
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 3.1e-204 715.3 448 79.0
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 5.3e-204 714.5 459 76.9
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 1.5e-203 713.0 460 75.9
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 2.0e-203 712.6 459 76.7
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 2.6e-203 712.2 434 80.0
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 4.5e-203 711.4 442 77.8
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 5.9e-203 711.1 455 76.9
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 5.9e-203 711.1 455 76.9
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 1.3e-202 709.9 442 77.1
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 1.7e-202 709.5 452 76.1
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 3.8e-202 708.4 463 75.2
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 5.0e-202 708.0 468 74.1
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 6.5e-202 707.6 455 76.3
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 8.5e-202 707.2 456 76.1
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 1.4e-201 706.4 469 74.0
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 1.9e-201 706.1 469 74.0
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 1.9e-201 706.1 474 73.4
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 3.2e-201 705.3 455 76.0
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 3.2e-201 705.3 455 76.0
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 4.2e-201 704.9 449 77.1
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 9.4e-201 703.7 462 75.3
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 9.4e-201 703.7 455 76.3
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 1.6e-200 703.0 464 74.6
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 4.6e-200 701.4 469 73.1
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 6.1e-200 701.0 463 74.7
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 7.9e-200 700.7 455 75.6
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.0e-199 700.3 473 72.9
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 1.4e-199 699.9 465 74.6
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 1.1e-198 696.8 464 74.6
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.0e-198 696.0 450 75.8
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 2.0e-198 696.0 458 75.1
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 4.3e-198 694.9 459 75.4
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 7.4e-198 694.1 451 74.9
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 9.7e-198 693.7 477 72.3
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 1.3e-197 693.3 494 70.6
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 2.2e-197 692.6 459 73.0
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.2e-197 692.6 450 75.1
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 2.2e-197 692.6 450 75.1
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 2.8e-197 692.2 462 74.7
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 3.7e-197 691.8 464 74.4
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 1.1e-196 690.3 464 72.0
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 4.1e-196 688.3 471 71.8
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 5.3e-196 688.0 464 73.7
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 9.1e-196 687.2 467 71.9
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 1.2e-195 686.8 469 71.9
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 1.5e-195 686.4 453 73.7
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 1.5e-195 686.4 469 72.3
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.5e-195 686.4 447 75.8
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 4.5e-195 684.9 471 72.2
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 4.5e-195 684.9 463 72.8
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 2.2e-194 682.6 431 76.1
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 2.9e-194 682.2 447 75.4
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 2.9e-194 682.2 458 72.5
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 2.9e-194 682.2 462 72.3
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 5.0e-194 681.4 433 75.8
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 6.5e-194 681.0 459 72.5
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 6.5e-194 681.0 444 74.1
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 8.5e-194 680.6 453 73.7
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 1.4e-193 679.9 447 74.7
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 1.4e-193 679.9 458 72.3
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 3.2e-193 678.7 476 72.5
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 2.1e-192 676.0 459 73.2
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 2.7e-192 675.6 435 73.8
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 7.9e-192 674.1 459 72.8
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 3.0e-191 672.2 462 71.0
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 3.0e-191 672.2 463 70.6
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 8.8e-191 670.6 461 71.4
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 1.5e-190 669.8 466 71.7
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 7.4e-190 667.5 459 70.8
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 7.4e-190 667.5 455 72.3
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 9.7e-190 667.2 442 74.7
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 2.2e-189 666.0 447 72.0
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 2.8e-189 665.6 433 75.1
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 2.8e-189 665.6 433 75.1
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 2.8e-189 665.6 464 69.8
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 6.3e-189 664.5 454 72.2
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 1.1e-188 663.7 464 71.1
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 1.1e-188 663.7 464 70.5
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 1.1e-188 663.7 437 74.6
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 1.8e-188 662.9 465 71.0
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 1.2e-187 660.2 451 71.6
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 2.0e-187 659.4 456 71.5
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 2.0e-187 659.4 451 71.8
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 7.7e-187 657.5 465 68.8
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 2.9e-186 655.6 464 69.6
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 8.5e-186 654.1 436 74.3
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 5.5e-185 651.4 453 70.9
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 4.7e-184 648.3 452 71.2
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 1.0e-183 647.1 466 70.6
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 1.0e-183 647.1 451 68.7
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 1.8e-183 646.4 439 71.3
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 4.0e-183 645.2 449 70.2
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 5.2e-183 644.8 418 75.1
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 2.0e-182 642.9 451 69.8
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 1.4e-180 636.7 447 69.4
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 2.4e-180 636.0 447 68.9
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 4.1e-180 635.2 451 68.5
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 7.0e-180 634.4 446 68.4
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 7.0e-180 634.4 446 68.4
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 2.7e-179 632.5 446 68.4
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 2.7e-179 632.5 446 68.4
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 2.7e-179 632.5 410 74.6
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 4.5e-179 631.7 443 68.4
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 1.7e-178 629.8 421 73.2
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 1.7e-178 629.8 451 68.1
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 3.8e-178 628.6 404 76.0
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 1.1e-177 627.1 447 68.9
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.1e-177 627.1 442 69.2
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 1.9e-177 626.3 431 69.6
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 4.2e-177 625.2 398 77.6
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 1.5e-174 616.7 437 67.7
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 5.7e-174 614.8 427 68.9
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 9.8e-174 614.0 426 68.8
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 2.2e-173 612.8 426 68.8
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.1e-172 610.5 430 70.9
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 4.5e-171 605.1 457 66.5
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 1.0e-167 594.0 434 65.4
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 3.0e-167 592.4 392 74.0
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 6.8e-167 591.3 367 77.4
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 4.1e-164 582.0 373 75.9
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 5.9e-163 578.2 383 73.4
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 1.1e-161 573.9 393 72.0
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.2e-158 563.9 457 63.7
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 1.2e-150 537.3 373 71.6
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.1e-148 530.8 431 61.9
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 2.3e-146 523.1 442 62.0
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.3e-143 513.1 430 59.5
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 3.4e-142 509.2 420 59.0
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 4.7e-136 488.8 436 56.2
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.3e-133 480.7 444 59.0
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 2.3e-130 469.9 478 52.7
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 2.1e-120 436.8 290 74.1
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 6.4e-117 425.2 315 65.4
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 4.2e-116 422.5 450 49.3
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 4.8e-112 409.1 235 83.4
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 8.7e-106 388.3 429 46.4
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 4.9e-101 372.5 274 66.8
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 8.7e-98 361.7 231 74.0
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 3.3e-97 359.8 443 45.1
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 4.1e-95 352.8 381 45.9
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 7.0e-71 272.3 269 56.1
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 2.0e-70 270.8 165 78.2
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 2.6e-65 253.8 473 37.8
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 4.0e-58 229.9 153 74.5
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 9.1e-55 218.8 473 35.3
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 4.5e-46 189.9 113 75.2
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.5e-41 174.9 95 84.2
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 2.2e-40 171.0 129 68.2
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 3.9e-21 107.1 82 63.4
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 1.2e-19 102.1 96 53.1
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 7.6e-17 92.8 61 67.2
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 1.9e-12 78.2 79 54.4
Dinv35628 Davidia involucrata HOM05D001886 ORTHO05D005666 3.8e-08 63.9 200 28.0
MBI14_g24315_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D005666 8.4e-08 62.8 195 28.2
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 4.2e-07 60.5 105 26.7
Medtr7g099870 Medicago truncatula HOM05D001886 ORTHO05D005666 5.4e-07 60.1 200 25.5
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 2.1e-06 58.2 43 65.1
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 4.6e-06 57.0 43 62.8


User provided reference genes

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