Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 5.1e-134 481.1 247 100.0
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 7.9e-127 457.2 246 93.9
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 7.9e-127 457.2 246 93.9
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.0e-126 456.8 246 93.9
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.9e-126 454.9 246 93.1
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.9e-112 409.5 246 82.5
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.6e-111 406.4 246 80.9
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.9e-110 401.7 245 81.6
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.9e-110 401.7 245 80.0
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 8.8e-110 400.6 246 78.5
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 8.8e-110 400.6 246 78.9
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 3.7e-108 395.2 245 77.1
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 3.7e-108 395.2 249 78.3
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 3.7e-108 395.2 243 80.2
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 4.8e-108 394.8 245 76.7
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 4.8e-108 394.8 246 82.5
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 8.2e-108 394.0 243 79.0
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.1e-107 393.7 246 77.2
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.4e-107 393.3 243 79.4
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.8e-107 392.9 245 78.0
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 3.1e-107 392.1 243 79.0
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 4.1e-107 391.7 245 80.0
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 5.3e-107 391.3 243 78.6
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 7.0e-107 391.0 246 77.6
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 9.1e-107 390.6 245 75.5
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 9.1e-107 390.6 243 78.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.2e-106 390.2 247 78.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-106 390.2 245 76.7
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 3.5e-106 388.7 259 76.8
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 4.5e-106 388.3 245 76.3
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 5.9e-106 387.9 245 75.9
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 5.9e-106 387.9 245 75.9
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 5.9e-106 387.9 245 75.9
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 5.9e-106 387.9 246 76.8
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.0e-105 387.1 245 75.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.0e-105 387.1 245 75.1
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.3e-105 386.7 246 76.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 1.3e-105 386.7 246 76.4
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.3e-105 386.7 246 75.2
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.7e-105 386.3 242 77.7
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.2e-105 386.0 246 76.8
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.9e-105 385.6 245 76.7
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 3.8e-105 385.2 240 77.1
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 3.8e-105 385.2 240 77.1
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 3.8e-105 385.2 245 75.9
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 3.8e-105 385.2 245 76.7
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 3.8e-105 385.2 246 78.9
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 5.0e-105 384.8 245 77.1
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 6.5e-105 384.4 245 76.3
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 6.5e-105 384.4 245 77.1
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 8.5e-105 384.0 242 76.9
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 8.5e-105 384.0 246 77.6
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 8.5e-105 384.0 245 76.7
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.5e-104 383.3 245 76.3
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.9e-104 382.9 245 76.3
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 4.2e-104 381.7 203 96.6
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 9.4e-104 380.6 245 75.1
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 9.4e-104 380.6 245 74.7
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.2e-103 380.2 242 75.6
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.6e-103 379.8 252 75.0
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 2.1e-103 379.4 244 75.8
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 75.5
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.7e-103 379.0 245 75.9
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 3.6e-103 378.6 242 75.6
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 4.7e-103 378.3 245 75.1
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.4e-102 376.7 245 75.5
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.8e-102 376.3 247 75.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.0e-102 375.6 247 75.3
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-101 373.2 239 77.0
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 5.7e-101 371.3 245 73.1
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 7.0e-99 364.4 245 73.1
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 9.1e-99 364.0 264 69.3
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.2e-98 363.6 245 74.7
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 7.7e-98 360.9 245 71.0
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.7e-97 359.8 245 73.9
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 8.5e-97 357.5 247 70.4
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.1e-96 357.1 236 74.6
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 2.5e-96 355.9 245 71.8
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 9.4e-96 354.0 247 71.7
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 4.8e-92 341.7 203 82.8
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.4e-91 340.1 210 80.5
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.4e-91 339.3 245 69.0
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.4e-91 339.3 246 67.5
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.1e-91 339.0 208 80.8
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.1e-91 339.0 245 69.0
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.0e-89 334.0 225 77.3
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.3e-86 322.8 239 66.1
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 3.0e-86 322.4 246 64.6
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 5.2e-86 321.6 184 89.7
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 4.4e-85 318.5 245 63.7
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 4.9e-84 315.1 245 66.1
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.1e-83 313.9 198 73.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.9e-81 305.8 246 64.2
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 3.8e-81 305.4 202 76.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 8.6e-81 304.3 194 70.6
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 9.2e-75 284.3 245 61.2
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.9e-73 279.3 246 60.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.1e-71 273.1 263 60.1
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 2.9e-68 262.7 238 54.2
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 5.4e-67 258.5 241 53.9
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 4.0e-62 242.3 238 52.1
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 9.8e-61 237.7 156 71.2
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 9.2e-59 231.1 240 47.9
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.7e-58 229.6 202 63.4
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.7e-58 229.6 236 47.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.7e-50 203.0 152 67.8
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 4.6e-50 202.2 146 67.8
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-49 199.9 143 68.5
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 1.5e-48 197.2 116 80.2
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 8.1e-47 191.4 151 61.6
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.8e-46 190.3 116 79.3
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 8.9e-46 188.0 116 78.4
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 7.6e-37 158.3 119 70.6
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 4.6e-34 149.1 95 73.7
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.5e-32 143.3 231 37.7
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.1e-31 140.2 93 71.0
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 8.1e-31 138.3 91 70.3
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 3.5e-18 96.3 71 64.8
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 7.9e-18 95.1 166 39.8
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 3.7e-15 86.3 238 27.7
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.3e-08 62.8 38 92.1


User provided reference genes

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