Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004576g0010 Nicotiana tabacum HOM05D002570 ORTHO05D002689 9.3e-46 186.4 88 100.0
Nitab4.5_0007120g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 1.8e-41 172.2 95 88.4
Nitab4.5_0007120g0040 Nicotiana tabacum HOM05D002570 ORTHO05D002689 9.0e-41 169.9 96 88.5
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 8.7e-28 126.7 94 66.0
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 1.9e-27 125.6 94 64.9
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 4.3e-27 124.4 94 64.9
CAN.G1008.23 Capsicum annuum HOM05D002570 ORTHO05D002689 1.6e-26 122.5 94 63.8
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 2.1e-26 122.1 94 63.8
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 2.1e-26 122.1 94 63.8
Peaxi162Scf00314g00938 Petunia axillaris HOM05D002570 ORTHO05D002689 1.8e-25 119.0 94 63.8
QL05p081283 Quercus lobata HOM05D002570 ORTHO05D002689 7.6e-24 113.6 91 61.5
Potri.001G037400 Populus trichocarpa HOM05D002570 ORTHO05D002689 8.4e-23 110.2 91 59.3
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 1.4e-22 109.4 96 60.4
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 1.4e-22 109.4 91 58.2
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 1.9e-22 109.0 93 60.2
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 1.9e-22 109.0 93 60.2
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 3.2e-22 108.2 91 58.2
Solyc06g068620.3 Solanum lycopersicum HOM05D002570 ORTHO05D002689 4.2e-22 107.8 69 76.8
Sopen06g025880 Solanum pennellii HOM05D002570 ORTHO05D002689 4.2e-22 107.8 69 76.8
Duzib192G0671 Durio zibethinus HOM05D002570 ORTHO05D002689 9.3e-22 106.7 92 56.5
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 1.2e-21 106.3 91 57.1
CAN.G1089.3 Capsicum annuum HOM05D002570 ORTHO05D002689 2.1e-21 105.5 69 76.8
Sabra03G0137200 Salix brachista HOM05D002570 ORTHO05D002689 1.0e-20 103.2 93 55.9
Manes.11G071400 Manihot esculenta HOM05D002570 ORTHO05D002689 2.3e-20 102.1 91 56.0
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 3.0e-20 101.7 88 56.8
GSVIVG01016063001 Vitis vinifera HOM05D002570 ORTHO05D002689 3.0e-20 101.7 92 55.4
Manes.04G097900 Manihot esculenta HOM05D002570 ORTHO05D002689 5.1e-20 100.9 93 54.8
Dinv23257 Davidia involucrata HOM05D002570 ORTHO05D002689 6.7e-20 100.5 89 58.4
HanXRQChr04g0099961 Helianthus annuus HOM05D002570 ORTHO05D002689 6.7e-20 100.5 92 57.6
DCAR_016323 Daucus carota HOM05D002570 ORTHO05D002689 1.1e-19 99.8 91 54.9
Hma1.2p1_1208F.1_g267175 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 1.1e-19 99.8 91 57.1
Phvul.005G184200 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 1.1e-19 99.8 90 54.4
Potri.003G187500 Populus trichocarpa HOM05D002570 ORTHO05D002689 1.5e-19 99.4 87 57.5
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 2.5e-19 98.6 94 56.4
ClCG09G003530 Citrullus lanatus HOM05D002570 ORTHO05D002689 3.3e-19 98.2 92 53.3
Haze_15246 Corylus avellana HOM05D002570 ORTHO05D002689 3.3e-19 98.2 108 47.2
CsaV3_7G031670 Cucumis sativus L. HOM05D002570 ORTHO05D002689 3.3e-19 98.2 92 54.3
Sed0009460 Sechium edule HOM05D002570 ORTHO05D002689 4.3e-19 97.8 91 53.8
MELO3C023490.2 Cucumis melo HOM05D002570 ORTHO05D002689 7.4e-19 97.1 92 53.3
Gohir.A05G143000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.3e-18 96.3 95 57.9
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 1.3e-18 96.3 92 54.3
Ciclev10026849m.g Citrus clementina HOM05D002570 ORTHO05D002689 1.6e-18 95.9 90 50.0
TAR383G0799 Trochodendron aralioides HOM05D002570 ORTHO05D002689 3.7e-18 94.7 88 52.3
vmacro19088 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 3.7e-18 94.7 95 54.7
Gohir.D05G145400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 6.3e-18 94.0 95 56.8
Gorai.009G149300 Gossypium raimondii HOM05D002570 ORTHO05D002689 6.3e-18 94.0 95 56.8
FvH4_6g28000 Fragaria vesca HOM05D002570 ORTHO05D002689 8.2e-18 93.6 94 54.3
FAN14G4539 Fragaria x ananassa HOM05D002570 ORTHO05D002689 8.2e-18 93.6 94 54.3
Migut.I00642 Erythranthe guttata HOM05D002570 ORTHO05D002689 1.1e-17 93.2 78 56.4
SalBow1G2645 Salvia bowleyana HOM05D002570 ORTHO05D002689 1.1e-17 93.2 78 59.0
SGA_v2.0_scaffold74G24622 Striga asiatica HOM05D002570 ORTHO05D002689 1.1e-17 93.2 84 51.2
Migut.D01154 Erythranthe guttata HOM05D002570 ORTHO05D002689 1.4e-17 92.8 77 55.8
PGSC0003DMG400028926 Solanum tuberosum HOM05D002570 ORTHO05D002689 1.4e-17 92.8 62 75.8
Gorai.011G053600 Gossypium raimondii HOM05D002570 ORTHO05D002689 1.8e-17 92.4 93 52.7
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 1.8e-17 92.4 84 52.4
FAN02G4288 Fragaria x ananassa HOM05D002570 ORTHO05D002689 2.4e-17 92.0 94 52.1
Gohir.D10G050000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 2.4e-17 92.0 94 53.2
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 2.4e-17 92.0 90 56.7
RcHm_v2.0_Chr2g0131671 Rosa chinensis HOM05D002570 ORTHO05D002689 3.1e-17 91.7 92 50.0
FAN09G2432 Fragaria x ananassa HOM05D002570 ORTHO05D002689 4.1e-17 91.3 94 52.1
Lj3g0010275 Lotus japonicus HOM05D002570 ORTHO05D002689 4.1e-17 91.3 87 54.0
Peaxi162Scf00207g00335 Petunia axillaris HOM05D002570 ORTHO05D002689 4.1e-17 91.3 72 65.3
FAN05G0139 Fragaria x ananassa HOM05D002570 ORTHO05D002689 5.3e-17 90.9 94 52.1
FAN05G5383 Fragaria x ananassa HOM05D002570 ORTHO05D002689 5.3e-17 90.9 94 52.1
Sed0010699 Sechium edule HOM05D002570 ORTHO05D002689 5.3e-17 90.9 92 48.9
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 6.9e-17 90.5 90 54.4
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 6.9e-17 90.5 90 54.4
Eucgr.J03139 Eucalyptus grandis HOM05D002570 ORTHO05D002689 9.0e-17 90.1 89 51.7
Prupe.3G106900 Prunus persica HOM05D002570 ORTHO05D002689 9.0e-17 90.1 92 52.2
Glyma.13G371800 Glycine max HOM05D002570 ORTHO05D002689 1.2e-16 89.7 91 50.5
MSTRG.11212 Avicennia marina HOM05D002570 ORTHO05D002689 1.5e-16 89.4 89 53.9
MSTRG.22832 Avicennia marina HOM05D002570 ORTHO05D002689 2.0e-16 89.0 89 53.9
Sabra01G0026300 Salix brachista HOM05D002570 ORTHO05D002689 2.6e-16 88.6 69 63.8
Rhsim08G0200900 Rhododendron simsii HOM05D002570 ORTHO05D002689 4.5e-16 87.8 92 52.2
HanXRQChr02g0033781 Helianthus annuus HOM05D002570 ORTHO05D002689 1.0e-15 86.7 89 52.8
Gohir.A10G049400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 2.9e-15 85.1 95 51.6
MD17G1229300 Malus domestica HOM05D002570 ORTHO05D002689 1.4e-14 82.8 95 47.4
CsaV3_3G032640 Cucumis sativus L. HOM05D002570 ORTHO05D002689 1.9e-14 82.4 84 45.2
Actinidia18273 Actinidia chinensis HOM05D002570 ORTHO05D002689 3.2e-14 81.6 83 54.2
CANSAT64G2315 Cannabis sativa HOM05D002570 ORTHO05D002689 3.2e-14 81.6 89 49.4
Oeu033446.1 Olea europaea HOM05D002570 ORTHO05D002689 3.2e-14 81.6 68 57.4
Oeu036442.1 Olea europaea HOM05D002570 ORTHO05D002689 3.2e-14 81.6 83 51.8
Actinidia25496 Actinidia chinensis HOM05D002570 ORTHO05D002689 9.4e-14 80.1 106 46.2
MBI14_g19442_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 1.2e-13 79.7 78 51.3
MD09G1230400 Malus domestica HOM05D002570 ORTHO05D002689 1.6e-13 79.3 89 46.1
MBI16_g27293_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 2.7e-13 78.6 80 51.2
Medtr2g105430 Medicago truncatula HOM05D002570 ORTHO05D002689 2.7e-13 78.6 90 48.9
Lj3g0002113 Lotus japonicus HOM05D002570 ORTHO05D002689 3.6e-13 78.2 57 63.2
Glyma.15G001900 Glycine max HOM05D002570 ORTHO05D002689 4.6e-13 77.8 92 46.7
ECA247G0437 Erigeron canadensis HOM05D005398 ORTHO05D000476 2.3e-12 75.5 58 65.5
CiPaw.02G024300 Carya illinoinensis HOM05D002570 ORTHO05D002689 5.1e-12 74.3 83 50.6
ClCG10G012800 Citrullus lanatus HOM05D002570 ORTHO05D002689 6.7e-12 73.9 85 41.2
Atru.chr1.2751 Acer truncatum HOM05D002570 ORTHO05D002689 1.1e-11 73.2 86 43.0
TAR628G0321 Trochodendron aralioides HOM05D002570 ORTHO05D002689 5.7e-11 70.9 79 39.2
arahy.Tifrunner.gnm1.ann1.Z5UTBB Arachis hypogaea HOM05D002570 ORTHO05D002689 3.7e-10 68.2 68 50.0
arahy.Tifrunner.gnm1.ann1.NFUI4Q Arachis hypogaea HOM05D002570 ORTHO05D002689 4.8e-10 67.8 74 47.3
Glyma.19G015500 Glycine max HOM05D002570 ORTHO05D002689 4.8e-10 67.8 54 55.6
Lalb_Chr14g0376161 Lupinus albus HOM05D002570 ORTHO05D002689 4.8e-10 67.8 61 50.8
Lj2g0012585 Lotus japonicus HOM05D002570 ORTHO05D002689 6.3e-10 67.4 90 41.1
Phvul.004G022100 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 2.4e-09 65.5 54 53.7
Glyma.13G068400 Glycine max HOM05D002570 ORTHO05D002689 4.1e-09 64.7 54 51.9
unitig_22.g6281 Utricularia gibba HOM05D002570 ORTHO05D002689 6.9e-09 63.9 77 41.6
GSVIVG01009363001 Vitis vinifera HOM05D002570 ORTHO05D002689 6.9e-09 63.9 55 52.7
MELO3C028978.2 Cucumis melo HOM05D002570 ORTHO05D002689 1.2e-08 63.2 59 47.5
PSO170G3310 Papaver somniferum HOM05D002570 ORTHO05D002689 1.5e-08 62.8 61 49.2
CSS0011900 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 2.0e-08 62.4 64 42.2
CDE02G3789 Ceratophyllum demersum HOM05D002570 ORTHO05D002689 2.0e-08 62.4 70 44.3
PSO017G5699 Papaver somniferum HOM05D002570 ORTHO05D002689 2.6e-08 62.0 54 51.9
unitig_27.g24959 Utricularia gibba HOM05D002570 ORTHO05D002689 3.4e-08 61.6 50 54.0
Zm00001eb067680 Zea mays HOM05D002570 ORTHO05D002689 3.4e-08 61.6 81 44.4
TAR381G0312 Trochodendron aralioides HOM05D002570 ORTHO05D002689 4.5e-08 61.2 74 40.5
unitig_8.g3045 Utricularia gibba HOM05D002570 ORTHO05D002689 4.5e-08 61.2 54 51.9
vmacro21448 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 4.5e-08 61.2 71 40.8
Duzib041G0717 Durio zibethinus HOM05D002570 ORTHO05D002689 7.7e-08 60.5 68 45.6
Manes.18G044800 Manihot esculenta HOM05D002570 ORTHO05D002689 7.7e-08 60.5 74 40.5
Nn1g04609 Nelumbo nucifera HOM05D002570 ORTHO05D002689 7.7e-08 60.5 80 38.8
Rhsim07G0221300 Rhododendron simsii HOM05D002570 ORTHO05D002689 7.7e-08 60.5 71 39.4
TWI56G1429 Tripterygium wilfordii HOM05D002570 ORTHO05D002689 7.7e-08 60.5 76 38.2
TAR376G0812 Trochodendron aralioides HOM05D002570 ORTHO05D002689 1.0e-07 60.1 77 36.4
Atru.chr13.811 Acer truncatum HOM05D002570 ORTHO05D002689 1.3e-07 59.7 77 37.7
Ciclev10002925m.g Citrus clementina HOM05D002570 ORTHO05D002689 1.3e-07 59.7 88 37.5
Psat5g308160 Pisum sativum HOM05D002570 ORTHO05D002689 1.3e-07 59.7 84 42.9
DCAR_012810 Daucus carota HOM05D002570 ORTHO05D002689 1.7e-07 59.3 50 52.0
Medtr6g008680 Medicago truncatula HOM05D002570 ORTHO05D002689 1.7e-07 59.3 86 38.4
CiPaw.07G176800 Carya illinoinensis HOM05D002570 ORTHO05D002689 2.2e-07 58.9 80 41.2
SalBow7G3896 Salvia bowleyana HOM05D002570 ORTHO05D002689 2.2e-07 58.9 59 40.7
HPP92_015713 Vanilla planifolia HOM05D002570 ORTHO05D002689 2.2e-07 58.9 73 38.4
MBI16_g22819_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 2.9e-07 58.5 72 40.3
Sc05g0001400 Simmondsia chinensis HOM05D002570 ORTHO05D002689 2.9e-07 58.5 75 38.7
Sc15g0005580 Simmondsia chinensis HOM05D002570 ORTHO05D002689 3.8e-07 58.2 81 35.8
Os04g0658200 Oryza sativa ssp. japonica HOM05D002570 ORTHO05D002689 5.0e-07 57.8 59 50.8
vmacro22064 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 5.0e-07 57.8 63 39.7
unitig_578.g16139 Utricularia gibba HOM05D002570 ORTHO05D002689 6.5e-07 57.4 71 36.6
Sopen04g031620 Solanum pennellii HOM05D002570 ORTHO05D002689 8.5e-07 57.0 60 41.7
CDE05G0297 Ceratophyllum demersum HOM05D002570 ORTHO05D002689 1.1e-06 56.6 69 43.5
Manes.05G180500 Manihot esculenta HOM05D002570 ORTHO05D002689 1.4e-06 56.2 80 38.8
QL12p037631 Quercus lobata HOM05D002570 ORTHO05D002689 1.4e-06 56.2 54 46.3
Sc02g0007790 Simmondsia chinensis HOM05D002570 ORTHO05D002689 1.4e-06 56.2 62 40.3
Solyc04g078030.3 Solanum lycopersicum HOM05D002570 ORTHO05D002689 1.4e-06 56.2 60 41.7
Psat1g078440 Pisum sativum HOM05D002570 ORTHO05D002689 1.9e-06 55.8 80 38.8
PGR083G0844 Punica granatum HOM05D002570 ORTHO05D002689 1.9e-06 55.8 73 39.7
SalBow6G3045 Salvia bowleyana HOM05D002570 ORTHO05D002689 1.9e-06 55.8 73 41.1
SalBow8G2749 Salvia bowleyana HOM05D002570 ORTHO05D002689 1.9e-06 55.8 73 41.1
BcaB07g30593 Brassica carinata HOM05D002570 ORTHO05D002689 2.5e-06 55.5 61 39.3
Cpa.g.sc21.103 Carica papaya HOM05D002570 ORTHO05D002689 2.5e-06 55.5 78 41.0
Hma1.2p1_0819F.1_g223830 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 2.5e-06 55.5 76 34.2
HPP92_026648 Vanilla planifolia HOM05D002570 ORTHO05D002689 2.5e-06 55.5 73 37.0
Migut.N02768 Erythranthe guttata HOM05D002570 ORTHO05D002689 3.2e-06 55.1 60 36.7
HPP92_012494 Vanilla planifolia HOM05D002570 ORTHO05D002689 3.2e-06 55.1 56 42.9
SEGI_30481 Sequoiadendron giganteum HOM05D002570 ORTHO05D002689 4.2e-06 54.7 75 41.3
Sc10g0008480 Simmondsia chinensis HOM05D002570 ORTHO05D002689 4.2e-06 54.7 60 45.0
Os04g0603400 Oryza sativa ssp. japonica HOM05D002570 ORTHO05D002689 7.2e-06 53.9 82 40.2
TPR.G32582 Trifolium pratense HOM05D002570 ORTHO05D002689 9.4e-06 53.5 84 38.1


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