Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004573g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.0e-41 172.9 85 100.0
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-32 142.1 74 90.5
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-28 129.0 70 87.1
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 2.9e-28 128.3 65 92.3
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr13g0418951 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 4.9e-28 127.5 66 89.4
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 4.9e-28 127.5 70 85.7
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 4.9e-28 127.5 70 85.7
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.9e-28 127.5 70 85.7
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.4e-28 127.1 70 85.7
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.4e-28 127.1 70 85.7
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.4e-28 127.1 70 85.7
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 8.4e-28 126.7 70 85.7
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.1e-27 126.3 70 84.3
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 1.1e-27 126.3 70 85.7
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 1.1e-27 126.3 70 85.7
Lsat_1_v5_gn_0_15540 Lactuca sativa HOM05D000445 ORTHO05D000314 2.4e-27 125.2 66 87.9
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 2.4e-27 125.2 66 87.9
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 2.4e-27 125.2 66 87.9
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 2.4e-27 125.2 66 87.9
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 2.4e-27 125.2 66 87.9
Solyc09g031840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.4e-27 125.2 70 85.7
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 3.2e-27 124.8 65 89.2
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 3.2e-27 124.8 70 84.3
Sc25g0001980 Simmondsia chinensis HOM05D000445 ORTHO05D000314 3.2e-27 124.8 70 84.3
Gohir.D02G149651 Gossypium hirsutum HOM05D000445 ORTHO05D000314 7.1e-27 123.6 70 82.9
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-27 123.2 70 82.9
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-27 123.2 70 82.9
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.2e-26 122.9 70 85.7
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 1.2e-26 122.9 66 86.4
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 1.6e-26 122.5 65 87.7
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-26 122.1 69 84.1
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-26 122.1 69 84.1
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-26 122.1 69 84.1
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-26 122.1 69 84.1
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-26 122.1 69 84.1
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.6e-26 120.9 65 87.7
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 6.0e-26 120.6 66 84.8
CAN.G413.6 Capsicum annuum HOM05D000445 ORTHO05D000314 1.0e-25 119.8 77 77.9
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.8e-25 119.0 70 81.4
Nn020s41480 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.8e-25 119.0 65 86.2
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 2.3e-25 118.6 64 87.5
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 3.0e-25 118.2 65 84.6
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 3.9e-25 117.9 70 78.6
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 3.9e-25 117.9 70 80.0
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 3.9e-25 117.9 65 86.2
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.1e-25 117.5 70 82.9
Gorai.005G167600 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.1e-24 116.3 70 80.0
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.9e-24 115.5 70 81.4
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.9e-24 115.5 70 81.4
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 1.9e-24 115.5 70 77.1
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 1.9e-24 115.5 70 81.4
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 1.9e-24 115.5 70 78.6
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 2.5e-24 115.2 70 80.0
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 2.5e-24 115.2 70 80.0
Ah.10g029020 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 62 87.1
arahy.Tifrunner.gnm1.ann1.9A3TMW Arachis hypogaea HOM05D000445 ORTHO05D000314 3.3e-24 114.8 66 80.3
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 4.3e-24 114.4 63 82.5
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BolSC29t60491H Brassica oleracea HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BraSC138t45546Z Brassica rapa HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
BraSC25t45893Z Brassica rapa HOM05D000445 ORTHO05D000314 5.6e-24 114.0 70 80.0
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 7.4e-24 113.6 70 77.1
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 7.4e-24 113.6 70 77.1
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 9.6e-24 113.2 66 80.3
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 9.6e-24 113.2 65 81.5
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 9.6e-24 113.2 65 81.5
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 1.6e-23 112.5 77 76.6
Oeu012817.1 Olea europaea HOM05D000445 ORTHO05D000314 1.6e-23 112.5 70 80.0
Oeu058356.1 Olea europaea HOM05D000445 ORTHO05D000314 2.8e-23 111.7 70 78.6
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 1.4e-19 99.4 56 82.1
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.3e-17 92.8 49 89.8
FAN18G1965 Fragaria x ananassa HOM05D000445 ORTHO05D000314 3.0e-17 91.7 54 77.8
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 48 85.4
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund26852 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 71 69.0
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 6.3e-15 84.0 65 69.2
EL10As3g23367 Beta vulgaris HOM05D000445 ORTHO05D000314 2.4e-14 82.0 50 74.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.4e-14 82.0 65 58.5
Nitab4.5_0018503g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.1e-14 81.6 40 92.5
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.1e-14 81.6 86 50.0
Oeu062872.1 Olea europaea HOM05D000445 ORTHO05D000314 6.9e-14 80.5 49 75.5
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 1.5e-13 79.3 47 78.7
Solyc04g050840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.5e-13 79.3 86 50.0
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 5.9e-13 77.4 68 61.8
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 7.7e-13 77.0 82 50.0
Solyc03g080130.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.7e-12 75.9 37 89.2
HanXRQChr05g0152341 Helianthus annuus HOM05D000445 ORTHO05D000314 8.5e-12 73.6 33 97.0
HanXRQChr00c0448g0574801 Helianthus annuus HOM05D000445 ORTHO05D000314 1.4e-11 72.8 62 59.7
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 1.4e-11 72.8 42 81.0
Nitab4.5_0027450g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.4e-11 72.8 37 89.2
Nitab4.5_0001379g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.9e-11 72.4 37 89.2
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 4.2e-11 71.2 73 57.5
Nn233s45563 Nelumbo nucifera HOM05D000445 ORTHO05D000314 9.4e-11 70.1 32 96.9
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.4e-11 70.1 48 72.9
EL10As9g23920 Beta vulgaris HOM05D000445 ORTHO05D000314 2.1e-10 68.9 34 91.2
Lsat_1_v5_gn_7_82620 Lactuca sativa HOM05D001387 ORTHO05D001250 4.6e-10 67.8 34 88.2
Lalb_Chr01g0014981 Lupinus albus HOM05D000445 ORTHO05D000314 2.3e-09 65.5 32 93.8
Nitab4.5_0002093g0210 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-09 65.5 34 85.3
Migut.M00451 Erythranthe guttata HOM05D000445 ORTHO05D000314 3.9e-09 64.7 40 77.5
Eucgr.J02700 Eucalyptus grandis HOM05D000445 ORTHO05D000314 5.7e-08 60.8 34 82.4
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.7e-08 60.8 57 54.4
Hund19326 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-07 59.7 82 46.3
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-07 58.9 57 54.4
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 6.3e-07 57.4 82 42.7
Oeu015121.1 Olea europaea HOM05D000445 ORTHO05D000314 6.3e-07 57.4 38 71.1
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.3e-07 57.4 32 81.2
Gohir.D10G110850 Gossypium hirsutum HOM05D000445 ORTHO05D000314 8.2e-07 57.0 94 40.4
Nitab4.5_0001761g0270 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.2e-07 57.0 25 100.0
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.1e-06 56.6 70 48.6
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.4e-06 56.2 31 83.9
BolSC35t60720H Brassica oleracea HOM05D000445 ORTHO05D000314 2.4e-06 55.5 32 81.2
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 9.1e-06 53.5 34 70.6


User provided reference genes

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