Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.3e-168 596.3 290 100.0
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 1.3e-131 473.4 318 75.5
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 1.6e-131 473.0 312 76.0
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 2.2e-128 462.6 317 74.1
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 3.8e-128 461.8 326 72.7
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 1.5e-100 370.2 323 62.2
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 1.1e-95 354.0 211 82.5
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 1.1e-92 344.0 302 58.3
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 1.5e-92 343.6 309 57.6
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 2.2e-91 339.7 310 58.7
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 2.2e-91 339.7 315 58.1
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 4.8e-91 338.6 306 58.5
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 9.1e-90 334.3 313 56.2
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 4.5e-89 332.0 313 56.2
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.3e-88 330.5 313 56.2
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 3.8e-88 328.9 301 57.5
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 7.2e-87 324.7 298 57.4
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 9.4e-87 324.3 324 54.3
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 3.6e-86 322.4 300 55.0
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 3.6e-86 322.4 300 55.0
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 6.1e-86 321.6 314 55.4
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 7.9e-86 321.2 309 56.0
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 1.0e-85 320.9 296 57.8
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 1.4e-85 320.5 300 54.7
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.4e-85 320.5 299 58.2
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 2.3e-85 319.7 314 55.1
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 6.7e-85 318.2 307 56.7
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.1e-84 317.4 294 59.2
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 1.5e-84 317.0 313 55.3
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 1.5e-84 317.0 304 55.6
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 2.0e-84 316.6 300 54.3
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 2.0e-84 316.6 291 58.1
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 3.3e-84 315.8 309 55.7
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 7.4e-84 314.7 296 54.7
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 7.4e-84 314.7 305 55.7
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 2.2e-83 313.2 288 56.6
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 4.8e-83 312.0 300 54.0
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.3e-83 311.6 290 60.3
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 1.1e-82 310.8 307 54.4
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 1.4e-82 310.5 292 56.8
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 1.4e-82 310.5 318 53.1
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 3.1e-82 309.3 290 56.2
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 4.1e-82 308.9 309 53.7
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 9.1e-82 307.8 315 53.0
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 1.2e-81 307.4 290 56.2
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 1.6e-81 307.0 328 51.2
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 1.6e-81 307.0 301 54.8
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 4.5e-81 305.4 298 53.4
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 4.5e-81 305.4 311 55.6
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 7.7e-81 304.7 310 54.2
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 1.3e-80 303.9 288 58.3
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 1.7e-80 303.5 302 54.3
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 1.7e-80 303.5 290 55.9
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 1.1e-79 300.8 290 55.9
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 9.4e-79 297.7 295 54.2
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.6e-78 297.0 319 51.7
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 2.1e-78 296.6 318 50.9
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 3.6e-78 295.8 314 52.2
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 6.1e-78 295.0 343 48.7
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 8.0e-78 294.7 296 54.4
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 3.7e-75 285.8 287 52.6
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.4e-74 283.9 279 53.8
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 3.1e-74 282.7 339 47.5
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 7.7e-73 278.1 323 46.7
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 1.5e-71 273.9 285 51.2
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 2.5e-71 273.1 370 44.6
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 2.1e-70 270.0 210 64.3
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 2.1e-70 270.0 301 51.2
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.7e-70 269.6 306 46.7
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 1.0e-69 267.7 274 52.2
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 4.0e-69 265.8 308 48.1
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 8.8e-69 264.6 300 48.7
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.2e-68 264.2 297 47.5
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 2.8e-67 259.6 284 51.8
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 7.7e-65 251.5 212 60.8
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.3e-64 250.8 209 61.2
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 8.5e-64 248.1 210 62.4
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 5.5e-63 245.4 228 57.5
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 1.6e-62 243.8 281 50.9
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 1.6e-62 243.8 352 42.6
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 1.6e-62 243.8 202 62.9
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 3.6e-62 242.7 233 57.9
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.6e-62 242.7 315 46.3
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 4.7e-62 242.3 186 64.5
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 7.5e-60 235.0 266 50.0
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 4.9e-59 232.3 195 58.5
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 9.2e-58 228.0 339 43.1
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 2.7e-57 226.5 287 44.6
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 3.5e-57 226.1 285 44.2
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 9.5e-55 218.0 311 43.4
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.6e-54 217.2 345 42.3
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 3.6e-54 216.1 206 57.3
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.2e-52 211.1 284 44.4
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 1.2e-52 211.1 186 57.5
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 2.0e-52 210.3 176 59.1
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 3.7e-51 206.1 282 42.2
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 1.8e-50 203.8 325 39.7
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 1.7e-48 197.2 427 34.2
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 2.6e-44 183.3 300 36.3
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 2.9e-43 179.9 325 39.4
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 9.2e-42 174.9 199 49.7
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.3e-37 160.2 156 53.8
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 4.4e-36 156.0 190 46.8
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 9.8e-36 154.8 151 51.7
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 3.7e-35 152.9 266 33.1
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.9e-34 150.6 322 37.0
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 4.1e-34 149.4 237 43.5
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 4.6e-33 146.0 202 41.1
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 6.6e-32 142.1 184 44.6
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 1.3e-27 127.9 257 34.6
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 9.6e-23 111.7 68 76.5
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 1.6e-22 110.9 73 68.5
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 4.7e-22 109.4 88 62.5
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 8.1e-22 108.6 116 47.4
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 4.0e-21 106.3 68 70.6
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 2.0e-20 104.0 87 60.9
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 2.4e-18 97.1 86 57.0
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 8.7e-16 88.6 193 33.2
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 2.1e-14 84.0 240 30.0
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 8.1e-14 82.0 54 72.2
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 2.6e-12 77.0 64 56.2
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 3.3e-07 60.1 41 70.7
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 7.4e-07 58.9 85 42.4


User provided reference genes

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