Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004553g0090 Nicotiana tabacum HOM05D007924 ORTHO05D010328 3.3e-74 281.6 139 100.0
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 8.1e-36 154.1 78 93.6
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 2.3e-35 152.5 78 92.3
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.9e-32 142.9 139 58.3
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 2.1e-31 139.4 133 61.7
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 1.0e-30 137.1 77 84.4
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 2.3e-30 136.0 81 82.7
Nitab4.5_0000844g0160 Nicotiana tabacum HOM05D007924 ORTHO05D010328 6.6e-30 134.4 77 83.1
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 1.1e-29 133.7 81 81.5
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.1e-29 133.7 80 82.5
Ca_03774_v3 Cicer arietinum L. HOM05D007924 ORTHO05D010328 3.3e-29 132.1 137 54.7
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 4.3e-29 131.7 81 79.0
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 5.6e-29 131.3 81 79.0
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 7.3e-29 131.0 77 81.8
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 1.6e-28 129.8 80 80.0
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 2.1e-28 129.4 80 80.0
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 2.8e-28 129.0 80 81.2
Nitab4.5_0028251g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 2.8e-28 129.0 77 84.4
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 4.7e-28 128.3 80 80.0
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 4.7e-28 128.3 80 80.0
Nitab4.5_0003222g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 8.1e-28 127.5 71 85.9
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.4e-27 126.7 78 82.1
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 1.4e-27 126.7 80 78.8
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 3.1e-27 125.6 81 76.5
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 3.1e-27 125.6 81 76.5
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 4.0e-27 125.2 80 77.5
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 4.0e-27 125.2 80 77.5
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 4.0e-27 125.2 81 74.1
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 1.2e-26 123.6 81 75.3
Cfa023001 Carpinus fangiana HOM05D007924 ORTHO05D010328 2.4e-24 115.9 74 77.0
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 3.2e-24 115.5 80 76.2
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 3.2e-24 115.5 80 76.2
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 3.2e-24 115.5 80 76.2
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 3.2e-24 115.5 80 76.2
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 3.2e-24 115.5 80 76.2
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 3.2e-24 115.5 80 75.0
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 9.2e-24 114.0 80 75.0
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 1.2e-23 113.6 80 75.0
arahy.Tifrunner.gnm1.ann1.I8TN6N Arachis hypogaea HOM05D007924 ORTHO05D010328 1.3e-22 110.2 74 74.3
SabraMtG0001000 Salix brachista HOM05D007924 ORTHO05D010328 5.1e-22 108.2 80 71.2
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 6.6e-22 107.8 77 70.1
Nitab4.5_0002418g0190 Nicotiana tabacum HOM05D005794 ORTHO05D006814 2.5e-21 105.9 60 88.3
PGSC0003DMG400013141 Solanum tuberosum HOM05D007924 ORTHO05D010328 2.5e-21 105.9 55 90.9
Nitab4.5_0002734g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 4.4e-18 95.1 55 83.6
Nitab4.5_0008916g0090 Nicotiana tabacum HOM05D005794 ORTHO05D010328 4.2e-16 88.6 61 82.0
Nitab4.5_0003945g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 2.0e-10 69.7 59 66.1
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 2.6e-10 69.3 45 71.1
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 4.4e-10 68.6 38 84.2
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 4.4e-10 68.6 36 88.9
Potri.011G045912 Populus trichocarpa HOM05D007924 ORTHO05D010328 9.3e-08 60.8 58 56.9
CsaV3_5G015830 Cucumis sativus L. HOM05D007924 ORTHO05D010328 2.1e-07 59.7 38 71.1
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.0e-06 57.4 37 70.3
Nitab4.5_0000721g0200 Nicotiana tabacum HOM05D000059 ORTHO05D000128 1.0e-06 57.4 69 52.2


User provided reference genes

Program Settings