Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004553g0080 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.0e-78 295.0 142 100.0
Solyc00g500303.1 Solanum lycopersicum HOM05D005794 ORTHO05D006814 5.7e-61 237.7 160 77.5
Sopen00g001030 Solanum pennellii HOM05D005794 ORTHO05D006814 5.7e-61 237.7 160 77.5
SGA_v2.0_scaffold575G53003 Striga asiatica HOM05D005794 ORTHO05D006814 1.3e-60 236.5 160 77.5
Actinidia34813 Actinidia chinensis HOM05D005794 ORTHO05D006814 2.1e-60 235.7 160 76.9
Actinidia34939 Actinidia chinensis HOM05D005794 ORTHO05D006814 2.1e-60 235.7 160 76.9
HanXRQMTg0579171 Helianthus annuus HOM05D005794 ORTHO05D006814 1.4e-59 233.0 160 77.5
Lsat_1_v5_gn_0_2580 Lactuca sativa HOM05D005794 ORTHO05D006814 1.4e-59 233.0 160 77.5
Lsat_1_v5_gn_8_111680 Lactuca sativa HOM05D005794 ORTHO05D006814 1.4e-59 233.0 160 77.5
unitig_87.g28013 Utricularia gibba HOM05D005794 ORTHO05D006814 1.4e-59 233.0 160 76.9
Sopen06g006940 Solanum pennellii HOM05D005794 ORTHO05D006814 1.8e-59 232.6 160 76.9
Nitab4.5_0005637g0070 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.5e-58 229.6 160 74.4
PGR028G0014 Punica granatum HOM05D005794 ORTHO05D006814 3.4e-58 228.4 160 75.6
Duzib116G0905 Durio zibethinus HOM05D005794 ORTHO05D006814 7.6e-58 227.3 160 75.6
Potri.007G062402 Populus trichocarpa HOM05D005794 ORTHO05D006814 1.0e-57 226.9 160 75.0
CANSAT16G0022 Cannabis sativa HOM05D005794 ORTHO05D006814 1.7e-57 226.1 160 75.0
Lj3g0000092 Lotus japonicus HOM05D005794 ORTHO05D006814 2.2e-57 225.7 145 80.7
Ca_28561_v3 Cicer arietinum L. HOM05D005794 ORTHO05D006814 2.9e-57 225.3 160 75.6
Lalb_Chr00c24g0406721 Lupinus albus HOM05D005794 ORTHO05D006814 2.9e-57 225.3 160 75.6
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 2.9e-57 225.3 160 75.6
Lj2P1225T95 Lonicera japonica HOM05D005794 ORTHO05D006814 3.8e-57 224.9 160 75.0
Hma1.2p1_1338F.1_g276546 Hydrangea macrophylla HOM05D005794 ORTHO05D006814 5.0e-57 224.6 160 75.6
LjContig00315g0011412 Lotus japonicus HOM05D005794 ORTHO05D006814 5.0e-57 224.6 160 75.0
arahy.Tifrunner.gnm1.ann1.3CRZ8T Arachis hypogaea HOM05D005794 ORTHO05D006814 6.5e-57 224.2 160 75.0
arahy.Tifrunner.gnm1.ann1.KSB3D6 Arachis hypogaea HOM05D005794 ORTHO05D006814 6.5e-57 224.2 160 75.0
arahy.Tifrunner.gnm1.ann1.R0J8GI Arachis hypogaea HOM05D005794 ORTHO05D006814 6.5e-57 224.2 160 75.0
arahy.Tifrunner.gnm1.ann1.Y4WQEL Arachis hypogaea HOM05D005794 ORTHO05D006814 6.5e-57 224.2 160 75.0
RcHm_v2.0_Chr6g0257971 Rosa chinensis HOM05D005794 ORTHO05D006814 8.5e-57 223.8 160 75.0
RcHm_v2.0_MTg0498891 Rosa chinensis HOM05D005794 ORTHO05D006814 8.5e-57 223.8 160 75.0
Nn1g10154 Nelumbo nucifera HOM05D005794 ORTHO05D006814 1.4e-56 223.0 160 75.0
Zm00001eb384510 Zea mays HOM05D005794 ORTHO05D006814 2.5e-56 222.2 160 74.4
Zm00001eb434650 Zea mays HOM05D005794 ORTHO05D006814 2.5e-56 222.2 160 74.4
Zm00001eb434760 Zea mays HOM05D005794 ORTHO05D006814 2.5e-56 222.2 160 74.4
Zm00001eb437480 Zea mays HOM05D005794 ORTHO05D006814 2.5e-56 222.2 160 74.4
Lsat_1_v5_gn_5_16240 Lactuca sativa HOM05D005794 ORTHO05D006814 3.2e-56 221.9 156 75.6
Glyma.12G155300 Glycine max HOM05D005794 ORTHO05D006814 4.2e-56 221.5 160 75.0
Medtr6g032895 Medicago truncatula HOM05D005794 ORTHO05D006814 4.2e-56 221.5 160 74.4
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 1.2e-55 219.9 160 74.4
DCAR_032446 Daucus carota HOM05D005794 ORTHO05D006814 2.1e-55 219.2 160 73.8
AT2G07687 Arabidopsis thaliana HOM05D005794 ORTHO05D006814 3.6e-55 218.4 160 73.8
ATMG00730 Arabidopsis thaliana HOM05D005794 ORTHO05D006814 3.6e-55 218.4 160 73.8
AL5G20240 Arabidopsis lyrata HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
A04p09480 Brassica napus HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
BolSC28t60379H Brassica oleracea HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
BolSC28t60413H Brassica oleracea HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
BraSC48t46249Z Brassica rapa HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
BraSC54t46376Z Brassica rapa HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
CARHR283070 Cardamine hirsuta HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
Sp3g25640 Schrenkiella parvula HOM05D005794 ORTHO05D006814 4.6e-55 218.0 160 73.1
Cpa.g.c32646 Carica papaya HOM05D005794 ORTHO05D006814 1.0e-54 216.9 160 72.5
arahy.Tifrunner.gnm1.ann1.TM4QCS Arachis hypogaea HOM05D005794 ORTHO05D006814 3.9e-54 214.9 155 74.2
SHI15111 Sapria himalayana HOM05D005794 ORTHO05D006814 3.3e-53 211.8 151 72.2
Solyc00g019730.1 Solanum lycopersicum HOM05D005794 ORTHO05D006814 2.8e-52 208.8 145 75.9
CAN.G1.2 Capsicum annuum HOM05D005794 ORTHO05D006814 8.2e-52 207.2 148 73.6
Lj2P1227T94 Lonicera japonica HOM05D005794 ORTHO05D006814 6.9e-51 204.1 160 70.0
Sabra04G0097400 Salix brachista HOM05D005794 ORTHO05D006814 6.9e-51 204.1 148 73.6
SabraMtG0005200 Salix brachista HOM05D005794 ORTHO05D006814 6.9e-51 204.1 148 73.6
Gorai.001G162400 Gossypium raimondii HOM05D005794 ORTHO05D006814 5.9e-50 201.1 151 71.5
SEGI_38498 Sequoiadendron giganteum HOM05D005794 ORTHO05D006814 1.3e-49 199.9 155 69.0
Ah.10g027990 Amaranthus hybridus HOM05D005794 ORTHO05D006814 2.2e-49 199.1 148 73.0
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 1.4e-48 196.4 148 72.3
DCAR_029125 Daucus carota HOM05D005794 ORTHO05D006814 1.4e-48 196.4 148 72.3
arahy.Tifrunner.gnm1.ann1.75B77C Arachis hypogaea HOM05D005794 ORTHO05D006814 2.5e-48 195.7 142 73.9
Thhalv10023004m.g Eutrema salsugineum HOM05D005794 ORTHO05D006814 2.5e-48 195.7 141 73.0
Nitab4.5_0008916g0010 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.2e-48 195.3 160 68.8
Zm00001eb384560 Zea mays HOM05D005794 ORTHO05D006814 3.1e-35 152.1 119 70.6
Zm00001eb436440 Zea mays HOM05D005794 ORTHO05D006814 5.3e-35 151.4 122 69.7
Gorai.013G213200 Gossypium raimondii HOM05D005794 ORTHO05D006814 4.5e-34 148.3 155 58.1
Nitab4.5_0003945g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.9e-32 142.9 117 67.5
Gohir.D04G096432 Gossypium hirsutum HOM05D005794 ORTHO05D006814 1.8e-30 136.3 84 84.5
Nitab4.5_0000172g0610 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.8e-30 136.3 75 86.7
Nitab4.5_0002418g0190 Nicotiana tabacum HOM05D005794 ORTHO05D006814 6.7e-30 134.4 76 85.5
Ah.10g028710 Amaranthus hybridus HOM05D005794 ORTHO05D006814 1.5e-29 133.3 119 63.9
Nitab4.5_0001788g0090 Nicotiana tabacum HOM05D005794 ORTHO05D006814 2.0e-29 132.9 141 53.2
CAN.G134.170 Capsicum annuum HOM05D005794 ORTHO05D006814 7.5e-29 131.0 108 67.6
CsaV3_5G015960 Cucumis sativus L. HOM05D005794 ORTHO05D006814 2.2e-28 129.4 95 73.7
Nn1g10038 Nelumbo nucifera HOM05D005794 ORTHO05D006814 9.1e-27 124.0 66 90.9
CsaV3_5G015890 Cucumis sativus L. HOM05D005794 ORTHO05D006814 1.6e-26 123.2 104 66.3
Dinv06703 Davidia involucrata HOM05D005794 ORTHO05D006814 1.6e-26 123.2 64 92.2
ECA039G0030 Erigeron canadensis HOM05D005794 ORTHO05D006814 2.2e-25 119.4 63 90.5
BraSC77t46625Z Brassica rapa HOM05D005794 ORTHO05D006814 2.9e-25 119.0 104 64.4
Sed0025732 Sechium edule HOM05D005794 ORTHO05D006814 2.9e-25 119.0 64 90.6
Lj1g0014382 Lotus japonicus HOM05D005794 ORTHO05D006814 1.9e-24 116.3 146 52.1
C01p34950 Brassica napus HOM05D005794 ORTHO05D006814 7.2e-24 114.4 66 81.8
Medtr0495s0020 Medicago truncatula HOM05D005794 ORTHO05D006814 7.2e-24 114.4 61 90.2
CDE02G1904 Ceratophyllum demersum HOM05D005794 ORTHO05D006814 1.2e-23 113.6 64 85.9
Sed0001254 Sechium edule HOM05D005794 ORTHO05D006814 1.6e-23 113.2 104 63.5
VMungo0720G2880 Vigna mungo HOM05D005794 ORTHO05D006814 1.6e-23 113.2 61 90.2
Nitab4.5_0009256g0040 Nicotiana tabacum HOM05D005794 ORTHO05D006814 8.8e-22 107.5 120 57.5
MELO3C018157.2 Cucumis melo HOM05D005794 ORTHO05D006814 4.4e-21 105.1 57 87.7
SalBow1G4628 Salvia bowleyana HOM05D005794 ORTHO05D006814 7.0e-19 97.8 47 93.6
ATR0012G027 Amborella trichopoda HOM05D005794 ORTHO05D006814 9.1e-19 97.4 124 50.8
Nitab4.5_0001152g0840 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.5e-18 95.5 63 74.6
Oeu000568.1 Olea europaea HOM05D005794 ORTHO05D006814 2.9e-17 92.4 65 73.8
Haze_26985 Corylus avellana HOM05D005794 ORTHO05D006814 5.0e-17 91.7 175 36.0
SHI14273 Sapria himalayana HOM05D005794 ORTHO05D006814 1.6e-15 86.7 101 51.5
Nitab4.5_0004100g0090 Nicotiana tabacum HOM05D009808 ORTHO05D006814 2.8e-15 85.9 43 90.7
Psat0s4951g0040 Pisum sativum HOM05D005794 ORTHO05D006814 4.7e-15 85.1 132 45.5
Nitab4.5_0000681g0270 Nicotiana tabacum HOM05D005794 ORTHO05D006814 2.3e-14 82.8 51 82.4
BraSC177t45751Z Brassica rapa HOM05D005794 ORTHO05D006814 7.5e-13 77.8 83 57.8
SHI20514 Sapria himalayana HOM05D005794 ORTHO05D006814 1.3e-12 77.0 41 80.5
Nitab4.5_0002326g0060 Nicotiana tabacum HOM05D005794 ORTHO05D006814 7.0e-11 71.2 37 91.9
CsaV3_5G015820 Cucumis sativus L. HOM05D005794 ORTHO05D006814 2.0e-10 69.7 40 85.0
Oeu030834.3 Olea europaea HOM05D005794 ORTHO05D006814 7.8e-10 67.8 35 85.7
SMO310G0001 Selaginella moellendorffii HOM05D005794 ORTHO05D006814 2.1e-07 59.7 55 56.4
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 2.8e-07 59.3 33 78.8
Aa31csc549G50 Aethionema arabicum HOM05D005794 ORTHO05D006814 3.6e-07 58.9 29 89.7
SHI54766 Sapria himalayana HOM05D005794 ORTHO05D006814 1.8e-06 56.6 33 78.8


User provided reference genes

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