Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004544g0010 Nicotiana tabacum HOM05D000047 ORTHO05D006740 1.3e-60 236.1 111 100.0
Nitab4.5_0000031g0140 Nicotiana tabacum HOM05D024327 ORTHO05D006740 9.9e-37 156.8 112 74.1
Nitab4.5_0001152g0870 Nicotiana tabacum HOM05D024327 ORTHO05D006740 1.6e-31 139.4 112 64.3
CAN.G1180.13 Capsicum annuum HOM05D000047 ORTHO05D001383 4.6e-18 94.7 53 81.1
Sopen09g026480 Solanum pennellii HOM05D000047 ORTHO05D001383 7.6e-13 77.4 62 59.7
Sopen09g015060 Solanum pennellii HOM05D000047 ORTHO05D001383 6.5e-12 74.3 58 60.3
Hund07703 Selenicereus undatus HOM05D000047 ORTHO05D001383 8.5e-12 73.9 53 56.6
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 1.1e-11 73.6 53 54.7
CAN.G2150.1 Capsicum annuum HOM05D000550 ORTHO05D000400 1.4e-11 73.2 57 54.4
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 1.4e-11 73.2 52 55.8
Sopen04g015090 Solanum pennellii HOM05D000047 ORTHO05D006740 1.4e-11 73.2 58 58.6
Sopen05g014160 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-11 72.8 58 53.4
Hund12310 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.5e-11 72.4 57 50.9
Hund07466 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.2e-11 72.0 53 54.7
Sopen02g001360 Solanum pennellii HOM05D000691 ORTHO05D001383 4.2e-11 71.6 57 50.9
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL02p080030 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-11 71.2 52 57.7
FvH4_3g22806 Fragaria vesca HOM05D000047 ORTHO05D001383 7.2e-11 70.9 52 53.8
Dinv19965 Davidia involucrata HOM05D000047 ORTHO05D006740 9.4e-11 70.5 51 56.9
Sopen06g006960 Solanum pennellii HOM05D021371 ORTHO05D018133 9.4e-11 70.5 58 50.0
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-10 70.1 52 55.8
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-10 70.1 52 55.8
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 1.6e-10 69.7 61 49.2
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 2.1e-10 69.3 52 51.9
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 2.7e-10 68.9 55 52.7
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 2.7e-10 68.9 52 51.9
ClCG01G012050 Citrullus lanatus HOM05D000047 ORTHO05D000044 3.6e-10 68.6 59 52.5
Nitab4.5_0004169g0010 Nicotiana tabacum HOM05D024327 ORTHO05D011846 3.6e-10 68.6 44 75.0
Hund17001 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.6e-10 68.6 59 47.5
Sopen06g006560 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-10 68.6 58 50.0
Sopen12g027080 Solanum pennellii HOM05D000047 ORTHO05D012839 3.6e-10 68.6 58 48.3
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 4.6e-10 68.2 52 55.8
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.0e-09 67.0 59 49.2
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.0e-09 67.0 59 49.2
Hund14890 Selenicereus undatus HOM05D000047 ORTHO05D006740 1.8e-09 66.2 50 54.0
FvH4_6g53790 Fragaria vesca HOM05D000047 ORTHO05D006740 2.3e-09 65.9 55 50.9
Hund15606 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.1e-09 64.7 57 45.6
FAN07G2335 Fragaria x ananassa HOM05D000380 ORTHO05D000561 8.8e-09 63.9 52 48.1
Hund04643 Selenicereus undatus HOM05D000047 ORTHO05D001383 8.8e-09 63.9 46 60.9
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 8.8e-09 63.9 52 48.1
Thecc.09G241800 Theobroma cacao HOM05D000047 ORTHO05D006740 8.8e-09 63.9 67 46.3
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.1e-08 63.5 69 44.9
Hund02193 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-08 63.5 53 47.2
Sopen02g004180 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.2 49 51.0
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.2 49 51.0
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.2 49 51.0
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.2 49 51.0
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.2 49 51.0
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.2 49 51.0
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.2 49 51.0
FvH4_3g26704 Fragaria vesca HOM05D000047 ORTHO05D001383 2.5e-08 62.4 52 46.2
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-08 62.4 47 53.2
FvH4_3g07261 Fragaria vesca HOM05D000047 ORTHO05D001383 4.3e-08 61.6 55 47.3
Sopen02g001620 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 49 51.0
Sopen02g004290 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 39 61.5
Sopen04g021440 Solanum pennellii HOM05D000309 ORTHO05D001383 4.3e-08 61.6 40 57.5
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 40 57.5
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 40 57.5
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 40 57.5
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 40 57.5
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 61.6 40 57.5
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 5.7e-08 61.2 55 49.1
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-08 61.2 49 49.0
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-08 61.2 38 60.5
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-08 61.2 40 55.0
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-08 61.2 49 49.0
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 7.4e-08 60.8 40 57.5
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-08 60.5 49 51.0
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-08 60.5 49 51.0
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-07 60.1 40 55.0
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-07 60.1 40 55.0
Sed0016307 Sechium edule HOM05D008471 ORTHO05D006740 1.7e-07 59.7 41 61.0
Sopen09g008970 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-07 59.7 38 57.9
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.2e-07 59.3 57 47.4
Sopen11g022540 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-07 59.3 59 44.1
COL.COLO4_20276 Corchorus olitorius HOM05D009817 ORTHO05D006740 2.8e-07 58.9 37 64.9
COL.COLO4_37705 Corchorus olitorius HOM05D009817 ORTHO05D006740 2.8e-07 58.9 37 64.9
Gohir.D04G055325 Gossypium hirsutum HOM05D000047 ORTHO05D001383 2.8e-07 58.9 41 56.1
PGSC0003DMG400004225 Solanum tuberosum HOM05D000047 ORTHO05D001383 2.8e-07 58.9 40 57.5
COL.COLO4_13591 Corchorus olitorius HOM05D009817 ORTHO05D006740 3.7e-07 58.5 37 64.9
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 3.7e-07 58.5 49 49.0
Hund14965 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.8e-07 58.2 49 49.0
Sopen04g015000 Solanum pennellii HOM05D000047 ORTHO05D001383 4.8e-07 58.2 53 49.1
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 6.3e-07 57.8 43 51.2
COL.COLO4_20280 Corchorus olitorius HOM05D009817 ORTHO05D006740 8.2e-07 57.4 54 46.3
COL.COLO4_29986 Corchorus olitorius HOM05D009817 ORTHO05D006740 8.2e-07 57.4 64 43.8
Hund20685 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-06 57.0 62 38.7
FvH4_2g31621 Fragaria vesca HOM05D000047 ORTHO05D001383 1.4e-06 56.6 55 47.3
Hund08511 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-06 56.6 56 44.6
Sopen10g018410 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-06 56.6 51 47.1
ClCG09G014410 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.8e-06 56.2 55 45.5
COL.COLO4_10629 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.8e-06 56.2 37 62.2
COL.COLO4_15853 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.8e-06 56.2 37 62.2
COL.COLO4_16538 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.8e-06 56.2 37 62.2
COL.COLO4_37140 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.8e-06 56.2 37 62.2
COL.COLO4_37721 Corchorus olitorius HOM05D009817 ORTHO05D006740 1.8e-06 56.2 37 62.2
Sopen10g017260 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 56.2 38 60.5
COL.COLO4_15563 Corchorus olitorius HOM05D009817 ORTHO05D006740 3.1e-06 55.5 35 62.9
Sc08g0003690 Simmondsia chinensis HOM05D000047 ORTHO05D001383 3.1e-06 55.5 47 46.8
PGSC0003DMG400034598 Solanum tuberosum HOM05D000047 ORTHO05D010949 3.1e-06 55.5 42 61.9
COL.COLO4_26688 Corchorus olitorius HOM05D009817 ORTHO05D006740 4.1e-06 55.1 37 62.2
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.1e-06 55.1 34 64.7
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 4.1e-06 55.1 37 51.4
Sopen05g014380 Solanum pennellii HOM05D000047 ORTHO05D001383 5.3e-06 54.7 67 40.3


User provided reference genes

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